Miyakogusa Predicted Gene
- Lj6g3v0352720.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj6g3v0352720.1 Non Chatacterized Hit- tr|B8ANZ2|B8ANZ2_ORYSI
Putative uncharacterized protein OS=Oryza sativa
subsp,65.28,5e-17,eIF-5_eIF-2B,Translation initiation factor IF2/IF5;
SUBFAMILY NOT NAMED,NULL; EUKARYOTIC TRANSLATION,CUFF.57730.1
(126 letters)
Database: Glyma1.pep
75,778 sequences; 25,431,882 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Glyma14g38600.1 260 2e-70
Glyma02g40310.1 259 4e-70
Glyma19g00810.1 59 9e-10
Glyma05g09260.2 57 5e-09
Glyma05g09260.1 57 5e-09
Glyma02g10020.1 56 8e-09
Glyma18g52940.1 56 8e-09
Glyma02g00220.2 55 1e-08
Glyma02g00220.1 55 1e-08
>Glyma14g38600.1
Length = 268
Score = 260 bits (665), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 123/126 (97%), Positives = 124/126 (98%)
Query: 1 MRPPQVLREGTKKTVFVNFMDLCKTMHRQPDHVMAFLLAELGTSGSLDGQQRLVVKGRFA 60
MRPPQVLREGTKKTVFVNFMDLCKTMHRQPDHVMAFLLAELGTSGSLDGQQRLVVKGRFA
Sbjct: 143 MRPPQVLREGTKKTVFVNFMDLCKTMHRQPDHVMAFLLAELGTSGSLDGQQRLVVKGRFA 202
Query: 61 PKNFEGILRRYINEYVICFGCKSPDTILSKENRLFFLRCEKCGSGRSVAPIKAGFVARVG 120
PKNFEGILRRY+NEYVIC GCKSPDTILSKENRLFFLRCEKCGSGRSVAPIKAGFVARVG
Sbjct: 203 PKNFEGILRRYVNEYVICLGCKSPDTILSKENRLFFLRCEKCGSGRSVAPIKAGFVARVG 262
Query: 121 RRNAGT 126
RRN GT
Sbjct: 263 RRNTGT 268
>Glyma02g40310.1
Length = 268
Score = 259 bits (663), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 122/126 (96%), Positives = 124/126 (98%)
Query: 1 MRPPQVLREGTKKTVFVNFMDLCKTMHRQPDHVMAFLLAELGTSGSLDGQQRLVVKGRFA 60
MRPPQVLREGTKKTVFVNFMDLCKTMHRQPDHVMAFLLAELGTSGSLDGQQRLVVKGRFA
Sbjct: 143 MRPPQVLREGTKKTVFVNFMDLCKTMHRQPDHVMAFLLAELGTSGSLDGQQRLVVKGRFA 202
Query: 61 PKNFEGILRRYINEYVICFGCKSPDTILSKENRLFFLRCEKCGSGRSVAPIKAGFVARVG 120
PKNFEGILRRY+NEYVIC GCKSPDTIL+KENRLFFLRCEKCGSGRSVAPIKAGFVARVG
Sbjct: 203 PKNFEGILRRYVNEYVICLGCKSPDTILTKENRLFFLRCEKCGSGRSVAPIKAGFVARVG 262
Query: 121 RRNAGT 126
RRN GT
Sbjct: 263 RRNTGT 268
>Glyma19g00810.1
Length = 444
Score = 59.3 bits (142), Expect = 9e-10, Method: Composition-based stats.
Identities = 31/93 (33%), Positives = 47/93 (50%), Gaps = 2/93 (2%)
Query: 13 KTVFVNFMDLCKTMHRQPDHVMAFLLAELGTSGSLDGQQRLV-VKGRFAPKNFEGILRRY 71
KT VN +D+ K + R P + + ELG D + V G G+L +
Sbjct: 35 KTNIVNMVDIAKALARPPSYTTKYFGCELGAQSKFDEKVGTSHVNGSHDTPKLAGLLEIF 94
Query: 72 INEYVICFGCKSPDT-ILSKENRLFFLRCEKCG 103
I +YV C+GC +P+T IL +N++ L+C CG
Sbjct: 95 IKKYVQCYGCGNPETEILITKNQMIQLKCAACG 127
>Glyma05g09260.2
Length = 443
Score = 57.0 bits (136), Expect = 5e-09, Method: Composition-based stats.
Identities = 30/93 (32%), Positives = 46/93 (49%), Gaps = 2/93 (2%)
Query: 13 KTVFVNFMDLCKTMHRQPDHVMAFLLAELGTSGSLDGQQRLV-VKGRFAPKNFEGILRRY 71
KT VN +D+ K + R P + + ELG D + V G +L +
Sbjct: 35 KTNIVNMVDIAKALARPPSYTTKYFGCELGAQSKFDEKVGTSHVNGAHDTAKLAALLEIF 94
Query: 72 INEYVICFGCKSPDT-ILSKENRLFFLRCEKCG 103
I +YV C+GC +P+T IL +N++ L+C CG
Sbjct: 95 IKKYVQCYGCGNPETEILITKNQMIQLKCAACG 127
>Glyma05g09260.1
Length = 443
Score = 57.0 bits (136), Expect = 5e-09, Method: Composition-based stats.
Identities = 30/93 (32%), Positives = 46/93 (49%), Gaps = 2/93 (2%)
Query: 13 KTVFVNFMDLCKTMHRQPDHVMAFLLAELGTSGSLDGQQRLV-VKGRFAPKNFEGILRRY 71
KT VN +D+ K + R P + + ELG D + V G +L +
Sbjct: 35 KTNIVNMVDIAKALARPPSYTTKYFGCELGAQSKFDEKVGTSHVNGAHDTAKLAALLEIF 94
Query: 72 INEYVICFGCKSPDT-ILSKENRLFFLRCEKCG 103
I +YV C+GC +P+T IL +N++ L+C CG
Sbjct: 95 IKKYVQCYGCGNPETEILITKNQMIQLKCAACG 127
>Glyma02g10020.1
Length = 441
Score = 56.2 bits (134), Expect = 8e-09, Method: Composition-based stats.
Identities = 29/93 (31%), Positives = 46/93 (49%), Gaps = 2/93 (2%)
Query: 13 KTVFVNFMDLCKTMHRQPDHVMAFLLAELGTSGSLDGQQRLV-VKGRFAPKNFEGILRRY 71
KT VN +D+ K + R + + ELG D + V G G+L +
Sbjct: 35 KTNVVNMVDIAKALARPASYTTKYFGCELGAQSKFDEKTGTSHVNGAHDTTKLAGLLENF 94
Query: 72 INEYVICFGCKSPDT-ILSKENRLFFLRCEKCG 103
I +YV C+GC +P+T I+ +N++ L+C CG
Sbjct: 95 IKKYVQCYGCGNPETEIIITKNQMIQLKCAACG 127
>Glyma18g52940.1
Length = 439
Score = 56.2 bits (134), Expect = 8e-09, Method: Composition-based stats.
Identities = 29/93 (31%), Positives = 46/93 (49%), Gaps = 2/93 (2%)
Query: 13 KTVFVNFMDLCKTMHRQPDHVMAFLLAELGTSGSLDGQQRLV-VKGRFAPKNFEGILRRY 71
KT VN +D+ K + R + + ELG D + V G G+L +
Sbjct: 35 KTNVVNMVDIAKALARPASYTTKYFGCELGAQSKFDEKTGTSHVNGAHDTAKLAGLLENF 94
Query: 72 INEYVICFGCKSPDT-ILSKENRLFFLRCEKCG 103
I +YV C+GC +P+T I+ +N++ L+C CG
Sbjct: 95 IKKYVQCYGCGNPETEIIITKNQMIQLKCAACG 127
>Glyma02g00220.2
Length = 442
Score = 55.5 bits (132), Expect = 1e-08, Method: Composition-based stats.
Identities = 29/93 (31%), Positives = 46/93 (49%), Gaps = 2/93 (2%)
Query: 13 KTVFVNFMDLCKTMHRQPDHVMAFLLAELGTSGSLDGQQRLV-VKGRFAPKNFEGILRRY 71
KT VN +D+ K + R + + ELG D + V G G+L +
Sbjct: 35 KTNVVNMVDIAKALARPASYTTKYFGCELGAQSKFDEKTGTSHVNGAHDTVKLAGLLENF 94
Query: 72 INEYVICFGCKSPDT-ILSKENRLFFLRCEKCG 103
I +YV C+GC +P+T I+ +N++ L+C CG
Sbjct: 95 IKKYVQCYGCGNPETEIIITKNQMIQLKCAACG 127
>Glyma02g00220.1
Length = 442
Score = 55.5 bits (132), Expect = 1e-08, Method: Composition-based stats.
Identities = 29/93 (31%), Positives = 46/93 (49%), Gaps = 2/93 (2%)
Query: 13 KTVFVNFMDLCKTMHRQPDHVMAFLLAELGTSGSLDGQQRLV-VKGRFAPKNFEGILRRY 71
KT VN +D+ K + R + + ELG D + V G G+L +
Sbjct: 35 KTNVVNMVDIAKALARPASYTTKYFGCELGAQSKFDEKTGTSHVNGAHDTVKLAGLLENF 94
Query: 72 INEYVICFGCKSPDT-ILSKENRLFFLRCEKCG 103
I +YV C+GC +P+T I+ +N++ L+C CG
Sbjct: 95 IKKYVQCYGCGNPETEIIITKNQMIQLKCAACG 127