Miyakogusa Predicted Gene

Lj6g3v0352690.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj6g3v0352690.1 tr|B9INK8|B9INK8_POPTR Predicted protein
OS=Populus trichocarpa GN=POPTRDRAFT_780809 PE=4
SV=1,45.08,6e-18,coiled-coil,NULL,CUFF.57725.1
         (124 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma14g38570.1                                                       136   5e-33
Glyma02g40300.1                                                       135   9e-33
Glyma18g05790.1                                                       106   6e-24
Glyma11g31390.1                                                       102   9e-23

>Glyma14g38570.1 
          Length = 627

 Score =  136 bits (342), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 70/124 (56%), Positives = 98/124 (79%)

Query: 1   MSKLMEKQTHMEEKVREWEIHCQSLQEKIRKIYSEKIEMEEILKGEIEQLKEDNSCMKNS 60
           MSK+++K+TH+EE++REWE   +  +++IR+I SEK+E EE LKGEI+ LK D    +++
Sbjct: 440 MSKVLDKRTHLEERIREWESRGRCFEDEIRRIQSEKMETEEALKGEIQLLKADIEQRESN 499

Query: 61  IKDLNESIDALTLERDDLNAEGGSLKEVLNSRDNQIEQMDMNLKQLHMEHVQLIAGMEEA 120
           IKDLN  +D L LE+D+L+ E  SLKE +NSRD +IE ++ +L QLHMEHVQLIAGM+EA
Sbjct: 500 IKDLNTILDTLKLEKDNLHVEVYSLKEEVNSRDGRIEHLNTHLNQLHMEHVQLIAGMDEA 559

Query: 121 QRQV 124
           Q+QV
Sbjct: 560 QKQV 563


>Glyma02g40300.1 
          Length = 610

 Score =  135 bits (340), Expect = 9e-33,   Method: Compositional matrix adjust.
 Identities = 70/124 (56%), Positives = 97/124 (78%)

Query: 1   MSKLMEKQTHMEEKVREWEIHCQSLQEKIRKIYSEKIEMEEILKGEIEQLKEDNSCMKNS 60
           MSK++E++TH+EE++REWE   +  ++ IR+I SEK+EMEE LKGEI+ LK      +N+
Sbjct: 423 MSKVLEERTHLEEQIREWESRGRCFEDDIRRIQSEKMEMEEALKGEIQLLKAGIEQRENN 482

Query: 61  IKDLNESIDALTLERDDLNAEGGSLKEVLNSRDNQIEQMDMNLKQLHMEHVQLIAGMEEA 120
           IK+LN SID L LE+D+L+ E GSLKE +NSRD +IE ++ +L +LH+EHVQLIAGMEEA
Sbjct: 483 IKELNTSIDTLKLEKDNLHVEVGSLKEEVNSRDGRIEHLNSHLNELHVEHVQLIAGMEEA 542

Query: 121 QRQV 124
            + V
Sbjct: 543 HKHV 546


>Glyma18g05790.1 
          Length = 512

 Score =  106 bits (264), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 61/106 (57%), Positives = 83/106 (78%)

Query: 1   MSKLMEKQTHMEEKVREWEIHCQSLQEKIRKIYSEKIEMEEILKGEIEQLKEDNSCMKNS 60
           MSKL+ +QTH+EEK +EWE  CQSL+E+IRKIY EKIEM E LKGEIE LKE+    K +
Sbjct: 365 MSKLLGEQTHLEEKFKEWECQCQSLEEEIRKIYFEKIEMGETLKGEIELLKEEIESKKKN 424

Query: 61  IKDLNESIDALTLERDDLNAEGGSLKEVLNSRDNQIEQMDMNLKQL 106
           I+D+N ++D + L+RD+L  E GSLKEV+NSRD++IE+    +++L
Sbjct: 425 IEDVNVNLDVMKLDRDNLKEEVGSLKEVINSRDDEIEEAHKQVEEL 470


>Glyma11g31390.1 
          Length = 506

 Score =  102 bits (254), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 59/106 (55%), Positives = 85/106 (80%)

Query: 1   MSKLMEKQTHMEEKVREWEIHCQSLQEKIRKIYSEKIEMEEILKGEIEQLKEDNSCMKNS 60
           M KL+ +QTH+EEK++E E HCQ+L+++I+KI+SEK+EM E LKGEIE+LKE+    K S
Sbjct: 357 MPKLLGEQTHLEEKLKEREFHCQALEDEIKKIHSEKLEMGETLKGEIEKLKEEIESRKKS 416

Query: 61  IKDLNESIDALTLERDDLNAEGGSLKEVLNSRDNQIEQMDMNLKQL 106
           I+D N S+DAL LER+DL  E GSLKEV+NSR++++E+    +++L
Sbjct: 417 IEDANVSLDALKLERNDLKEEVGSLKEVVNSRNDEVEEAHKQVEEL 462