Miyakogusa Predicted Gene

Lj6g3v0328460.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj6g3v0328460.1 Non Chatacterized Hit- tr|F6HDU1|F6HDU1_VITVI
Putative uncharacterized protein OS=Vitis vinifera
GN=,49.43,2e-16,seg,NULL,NODE_62634_length_1003_cov_60.294117.path2.1
         (312 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma06g05380.1                                                       223   2e-58

>Glyma06g05380.1 
          Length = 279

 Score =  223 bits (568), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 110/145 (75%), Positives = 132/145 (91%), Gaps = 5/145 (3%)

Query: 16  YTLQPSRICNEDILFCIDIDPQSLVEMKTATGHNGRPLTRLDSIKQSILLFVHSKLTINP 75
           Y+L+PSRICNED+L C+D+DPQ LVEMK ATG NGRPLTRLDSIKQ+I+LFV++KLTINP
Sbjct: 29  YSLKPSRICNEDVLICVDVDPQCLVEMKGATGPNGRPLTRLDSIKQAIVLFVNAKLTINP 88

Query: 76  DHRFAFATLSNT-VSWLKKDFSSDVESTMAAMRGLSATNIST----QPDLTNLFRLAAHE 130
           +HRFAFATLSNT VSW++K+FSS++EST+AAMR LSA++ S+    QPDLT+LFRLAAHE
Sbjct: 89  EHRFAFATLSNTLVSWVRKEFSSEIESTLAAMRVLSASSSSSTTAGQPDLTHLFRLAAHE 148

Query: 131 AKKSRAQGRILRVILFYCRSNVRPQ 155
           AKKSR QGRILRVILFYCRS+ RP+
Sbjct: 149 AKKSRLQGRILRVILFYCRSSERPK 173