Miyakogusa Predicted Gene

Lj6g3v0258710.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj6g3v0258710.1 Non Chatacterized Hit- tr|C5YBT8|C5YBT8_SORBI
Putative uncharacterized protein Sb06g001220 OS=Sorghu,36.94,4e-19,no
description,NULL; seg,NULL,CUFF.57671.1
         (179 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma18g00520.1                                                       192   1e-49
Glyma18g00520.2                                                       160   8e-40
Glyma11g36610.1                                                       124   6e-29

>Glyma18g00520.1 
          Length = 292

 Score =  192 bits (489), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 98/161 (60%), Positives = 117/161 (72%), Gaps = 7/161 (4%)

Query: 18  RLASFVCECEPLSVSEEELQAIESTFQXXXXX--XXXXXXXXXXXPTSLLALQLP---TL 72
           RLASFVC+CEPL+  E++L+AIE++                    P SL+ALQ P   + 
Sbjct: 11  RLASFVCDCEPLT--EDDLEAIEASLSNNKKRPFNDHTHTPRRRLPKSLIALQHPNASSF 68

Query: 73  SPSHSQGYSRMRLPVMKFSGQITYSRSFDDVQKAVTKLLEFVEEKKRAMMRIAIGFDIEW 132
           SP      SRM LPVMKFSGQI+YSR+FD V+KA TKLL+ ++EK   MM+ AIGFDIEW
Sbjct: 69  SPHPRPCDSRMTLPVMKFSGQISYSRTFDAVEKAATKLLQILQEKTTDMMQTAIGFDIEW 128

Query: 133 RPSFVRGVPPGKVAVMQICGDTSHCHVLHLIHSGIPQNLQL 173
           +P+F +GVPPGKVAVMQICGDT HCHVLHLIHSGIPQNLQL
Sbjct: 129 KPTFRKGVPPGKVAVMQICGDTRHCHVLHLIHSGIPQNLQL 169


>Glyma18g00520.2 
          Length = 214

 Score =  160 bits (404), Expect = 8e-40,   Method: Compositional matrix adjust.
 Identities = 71/91 (78%), Positives = 81/91 (89%)

Query: 83  MRLPVMKFSGQITYSRSFDDVQKAVTKLLEFVEEKKRAMMRIAIGFDIEWRPSFVRGVPP 142
           M LPVMKFSGQI+YSR+FD V+KA TKLL+ ++EK   MM+ AIGFDIEW+P+F +GVPP
Sbjct: 1   MTLPVMKFSGQISYSRTFDAVEKAATKLLQILQEKTTDMMQTAIGFDIEWKPTFRKGVPP 60

Query: 143 GKVAVMQICGDTSHCHVLHLIHSGIPQNLQL 173
           GKVAVMQICGDT HCHVLHLIHSGIPQNLQL
Sbjct: 61  GKVAVMQICGDTRHCHVLHLIHSGIPQNLQL 91


>Glyma11g36610.1 
          Length = 215

 Score =  124 bits (310), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 57/81 (70%), Positives = 68/81 (83%), Gaps = 4/81 (4%)

Query: 80  YSRMRLPVMKFSGQITYSRSFDDVQKAVTKLLEFVEEKKRAMMRIAIGFDIEWRPSFVRG 139
           YS MRLP+MKFSGQI Y R+FD V+KA TKLL+ ++E    MM+IAIGFDIEW+P+F +G
Sbjct: 1   YSSMRLPLMKFSGQIFYIRTFDAVEKAATKLLQILQE----MMQIAIGFDIEWKPTFRKG 56

Query: 140 VPPGKVAVMQICGDTSHCHVL 160
           VPPGKVAVMQI GDT HCH+L
Sbjct: 57  VPPGKVAVMQIYGDTRHCHLL 77