Miyakogusa Predicted Gene

Lj6g3v0248690.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj6g3v0248690.1 Non Chatacterized Hit- tr|I1MYA5|I1MYA5_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.48381
PE,79.86,0,coiled-coil,NULL; AAA_23,NULL; no description,NULL;
RAD50,NULL; P-loop containing nucleoside triphos,CUFF.57684.1
         (561 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma18g00530.1                                                       862   0.0  

>Glyma18g00530.1 
          Length = 1316

 Score =  862 bits (2228), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 434/561 (77%), Positives = 471/561 (83%)

Query: 1   MSTVDKMLIKGIRSFDPENKNVITFFKPLTLIVGPNGAGKTTIIECLKLSCTGELPPNAR 60
           MSTVDKMLIKGIRSFDPENKNVITFFKPLTLIVGPNGAGKTTIIECLKLSCTGELPPNAR
Sbjct: 1   MSTVDKMLIKGIRSFDPENKNVITFFKPLTLIVGPNGAGKTTIIECLKLSCTGELPPNAR 60

Query: 61  SGHSFIHDPKVAGETETKGQIKLRFKTPAGKDVVCIRSFQLTQKASKMEYKAIESVLQTI 120
           SGHSFIHDPKVAGETETKGQIKLRFKT AGKDVVC+RSFQLTQKASKMEYKAIESVLQTI
Sbjct: 61  SGHSFIHDPKVAGETETKGQIKLRFKTAAGKDVVCVRSFQLTQKASKMEYKAIESVLQTI 120

Query: 121 NPHSGEKVCLSYRCANMDKEIPALMGVSKAILENVIFVHQDEANWPLQDPSTLKKKFDDI 180
           NPH+GEKVCLSYRCA+MDKEIPALMGVSKAILENVIFVHQDEANWPLQDPSTLKKKFDDI
Sbjct: 121 NPHTGEKVCLSYRCADMDKEIPALMGVSKAILENVIFVHQDEANWPLQDPSTLKKKFDDI 180

Query: 181 FSATRYTKALEVIKKLHKEQAQEIKTYKLKLEHLQTLKDAAYKLRESIAQDQEKMEALKS 240
           FSATRYTKALEVIKKLHKEQAQEIKTYKLKLE+LQTLKDAAYKLRESIAQDQEK E+ + 
Sbjct: 181 FSATRYTKALEVIKKLHKEQAQEIKTYKLKLENLQTLKDAAYKLRESIAQDQEKTESAEC 240

Query: 241 QVQQLDGGIQDLDAKIDHAEKTFKDLRRLQEQISTKTAQRSVLFKEQQKQYSALXXXXXX 300
           Q+QQLDG IQ+LD KI H E+T K LR+LQEQISTKTAQRS+LFKEQQKQY AL      
Sbjct: 241 QLQQLDGSIQELDHKIHHTEETLKYLRKLQEQISTKTAQRSILFKEQQKQYLALTEEIED 300

Query: 301 XXXXXXXWKTKFSEMIAMLETKITKLEREMEDIDTKSSFLQKQIDNSNWEMGKLQTEAKA 360
                  WKTKF E IA LETKI++LERE EDID  SS L++ I  S   + KLQ EA+A
Sbjct: 301 TDEELMEWKTKFEERIASLETKISRLERETEDIDCTSSTLKETIAESIEVIAKLQAEAEA 360

Query: 361 HMSLKNERDSSIQNLFARYSLGSLPKSPFSDEVALNLTSRVKSRLGXXXXXXXXXXXAIN 420
           HMS KNERDSSI NLF  Y+LGSLPKSPFS EVALNLT+RVKSRL            A +
Sbjct: 361 HMSFKNERDSSIHNLFTTYNLGSLPKSPFSAEVALNLTNRVKSRLEDLEKDLDDKKKAND 420

Query: 421 NELKNAWDCYMEANDCWKNVDATKQAKIEIKSGKLKSIEEKTKERDSFELQISNVNFSLI 480
           NE+K A+DCYM AND  K+ +A  +A    KSG  K IEEK  E DS ELQIS+ NFS +
Sbjct: 421 NEIKMAFDCYMNANDRLKHTEAKIKAMTGSKSGISKRIEEKKNELDSLELQISDENFSQL 480

Query: 481 DERERNLHIEVERKTKQLSEREFEPNIRHMQSELYSVDQKIKGVNREKDIMASDSEDRVK 540
           DERERNL  EV+RK  QL ER+FEPN   ++ E+YSVDQKIK V+REKDIM SDS+DRVK
Sbjct: 481 DERERNLENEVKRKASQLDERQFEPNKCEVEKEIYSVDQKIKAVSREKDIMVSDSQDRVK 540

Query: 541 LSLKKTELENQKKKYKKIIDD 561
           LS KK ELE+QKKK+KKIID+
Sbjct: 541 LSYKKGELESQKKKHKKIIDE 561