Miyakogusa Predicted Gene

Lj6g3v0227420.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj6g3v0227420.1 Non Chatacterized Hit- tr|I3S932|I3S932_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=2 SV=1,99.1,0,60S
RIBOSOMAL PROTEIN L12,Ribosomal protein L11; Ribosomal protein
L11/L12,Ribosomal protein L11; no,CUFF.57646.1
         (223 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma01g40920.1                                                       280   9e-76
Glyma13g10300.1                                                       243   1e-64
Glyma11g37420.1                                                       112   3e-25
Glyma18g01390.1                                                       112   5e-25

>Glyma01g40920.1 
          Length = 215

 Score =  280 bits (716), Expect = 9e-76,   Method: Compositional matrix adjust.
 Identities = 149/197 (75%), Positives = 155/197 (78%), Gaps = 6/197 (3%)

Query: 24  IKFSLNPNPISLHFLENXXXXXXXXXXXXXXXXRFHVXXXXXXXXXXXXXXXXXIIKLAL 83
           +KFSLNPN ISL F  N                RF+V                 IIKLAL
Sbjct: 23  VKFSLNPNKISLPFAGNKKPLSAPIRR------RFNVIAMAPPKPGGKAKKVVGIIKLAL 76

Query: 84  EAGKATPAPPVGPALGSKGVNIMAFCKDYNARTADKPGYVIPVEITVYDDKSFTFILKTP 143
           EAGKATPAPPVGPALGSKGVNIMAFCKDYNARTADKPGYVIPVEITVYDDKSFTFILKTP
Sbjct: 77  EAGKATPAPPVGPALGSKGVNIMAFCKDYNARTADKPGYVIPVEITVYDDKSFTFILKTP 136

Query: 144 PASVLLLKAAGVEKGSKDPKMQKVGKVTIDQVRTIATEKLPDLNCSTLESAMRIIAGTAA 203
           PASVLLLKAAGVEKGSKDPK + VGKVTIDQ+RTIA EKLPDLNCS++ESAMRIIAGTAA
Sbjct: 137 PASVLLLKAAGVEKGSKDPKAEMVGKVTIDQLRTIAAEKLPDLNCSSIESAMRIIAGTAA 196

Query: 204 NMGIDVDPPVLEPKIKE 220
           NMGI VDPPVLEPK KE
Sbjct: 197 NMGIVVDPPVLEPKQKE 213


>Glyma13g10300.1 
          Length = 212

 Score =  243 bits (621), Expect = 1e-64,   Method: Compositional matrix adjust.
 Identities = 137/202 (67%), Positives = 143/202 (70%), Gaps = 19/202 (9%)

Query: 24  IKFSLNPNPISLHFLENXXXXXXXXXXXXXXXXRFHVXXXX-----XXXXXXXXXXXXXI 78
           +KFSLNPN ISL F  N                RF+V                      I
Sbjct: 23  VKFSLNPNKISLPFAGNKKPLSAPIRR------RFNVIAMAPPKPGGKAKKGNFLSRPGI 76

Query: 79  IKLALEAGKATPAPPVGPALGSKGVNIMAFCKDYNARTADKPGYVIPVEITVYDDKSFTF 138
           IKL LEAGKATPAPPVGPALGSKGVNIMAFCKDYNARTADKPGYVIPVEITVYDDKSFTF
Sbjct: 77  IKLTLEAGKATPAPPVGPALGSKGVNIMAFCKDYNARTADKPGYVIPVEITVYDDKSFTF 136

Query: 139 ILKTPPASVLLLKAAGVEKGSKDPKMQKVGKVTIDQVRTIATEKLPDLNCSTLESAMRII 198
           ILKTP           VEKGSKDPK +KVGKVTIDQ+RT A EKLPDLNCS++ESAMRII
Sbjct: 137 ILKTP--------CFRVEKGSKDPKAEKVGKVTIDQLRTSAAEKLPDLNCSSIESAMRII 188

Query: 199 AGTAANMGIDVDPPVLEPKIKE 220
           AGTAANMGI VDPPVLEPK KE
Sbjct: 189 AGTAANMGIVVDPPVLEPKQKE 210


>Glyma11g37420.1 
          Length = 149

 Score =  112 bits (280), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 67/137 (48%), Positives = 81/137 (59%), Gaps = 9/137 (6%)

Query: 79  IKLALEAGKATPAPPVGPALGSKGVNIMAFCKDYNART----ADKPGYVIPVEITVYDDK 134
           I+L + AG A PAPPVGPALG   +N+MAFCKD+NART    AD P   + V IT Y D 
Sbjct: 11  IRLTVPAGGARPAPPVGPALGQYRLNLMAFCKDFNARTQKYKADTP---MAVTITAYKDN 67

Query: 135 SFTFILKTPPASVLLLKAAGVEKGSKDPKMQKVGKVTIDQVRTIATEKLPD--LNCSTLE 192
           +F F +K+PP S  L KAAGVE GS  P       V++  V  IA  K  D  L    LE
Sbjct: 68  TFEFAVKSPPVSWYLKKAAGVESGSSRPGHVTSSSVSVRHVYEIAKAKQSDPYLQNMPLE 127

Query: 193 SAMRIIAGTAANMGIDV 209
           S  + I GTA +MGI +
Sbjct: 128 SISKSIIGTANSMGIKI 144


>Glyma18g01390.1 
          Length = 189

 Score =  112 bits (279), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 65/137 (47%), Positives = 81/137 (59%), Gaps = 9/137 (6%)

Query: 79  IKLALEAGKATPAPPVGPALGSKGVNIMAFCKDYNART----ADKPGYVIPVEITVYDDK 134
           I+L + AG A PAPPVGPALG   +N+MAFCKD+NART    A+ P   + V IT Y D 
Sbjct: 51  IRLTVPAGGARPAPPVGPALGQYRLNLMAFCKDFNARTQKYKAETP---MAVTITAYKDN 107

Query: 135 SFTFILKTPPASVLLLKAAGVEKGSKDPKMQKVGKVTIDQVRTIATEKLPD--LNCSTLE 192
           +F F +K+PP S  L KAAGVE GS  P       +++  V  IA  K  D  L    LE
Sbjct: 108 TFEFTVKSPPVSWYLKKAAGVESGSSRPGHVTASSLSVRHVHEIAKAKQSDPYLQNMPLE 167

Query: 193 SAMRIIAGTAANMGIDV 209
           S  + I GTA +MGI +
Sbjct: 168 SISKSIIGTANSMGIKI 184