Miyakogusa Predicted Gene
- Lj6g3v0216990.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj6g3v0216990.1 Non Chatacterized Hit- tr|I1KRG7|I1KRG7_SOYBN
Uncharacterized protein (Fragment) OS=Glycine max
PE=4,88.37,6e-17,DUF616,Protein of unknown function DUF616; SUBFAMILY
NOT NAMED,NULL; ALKALINE
CERAMIDASE-RELATED,NUL,gene.Ljchr6_pseudomol_20120830.path1.gene396.1
(82 letters)
Database: Glyma1.pep
75,778 sequences; 25,431,882 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Glyma08g09010.1 92 1e-19
Glyma05g26050.1 91 2e-19
Glyma15g10090.1 84 4e-17
Glyma13g28960.1 49 1e-06
>Glyma08g09010.1
Length = 445
Score = 91.7 bits (226), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 38/43 (88%), Positives = 42/43 (97%)
Query: 1 MEEAMATARWKKWWDINALKMQMETYCENGLQPWNPSKLPYVS 43
MEEA+ATARWKKWWD+NALKMQMETYCENGLQPW+P+KLPY S
Sbjct: 285 MEEAIATARWKKWWDVNALKMQMETYCENGLQPWSPTKLPYAS 327
>Glyma05g26050.1
Length = 458
Score = 91.3 bits (225), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 38/43 (88%), Positives = 40/43 (93%)
Query: 1 MEEAMATARWKKWWDINALKMQMETYCENGLQPWNPSKLPYVS 43
MEEAMATARWKKWWD+NALKMQME YCENGLQPW+P KLPY S
Sbjct: 297 MEEAMATARWKKWWDVNALKMQMEIYCENGLQPWSPGKLPYAS 339
>Glyma15g10090.1
Length = 458
Score = 84.0 bits (206), Expect = 4e-17, Method: Composition-based stats.
Identities = 36/43 (83%), Positives = 39/43 (90%)
Query: 1 MEEAMATARWKKWWDINALKMQMETYCENGLQPWNPSKLPYVS 43
MEEAMATARWKK D+NALK QMETYCENGLQPW+P+K PYVS
Sbjct: 297 MEEAMATARWKKLLDVNALKEQMETYCENGLQPWSPNKQPYVS 339
>Glyma13g28960.1
Length = 367
Score = 48.9 bits (115), Expect = 1e-06, Method: Composition-based stats.
Identities = 19/24 (79%), Positives = 21/24 (87%)
Query: 20 KMQMETYCENGLQPWNPSKLPYVS 43
K QMETYCENGLQPW+P+K PY S
Sbjct: 244 KEQMETYCENGLQPWSPNKQPYAS 267