Miyakogusa Predicted Gene

Lj6g3v0184200.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj6g3v0184200.1 Non Chatacterized Hit- tr|I1NHX6|I1NHX6_SOYBN
Uncharacterized protein OS=Glycine max PE=4 SV=1,40.34,0.0001,
,NODE_76267_length_607_cov_56.261944.path2.1
         (188 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma10g33560.2                                                        51   7e-07
Glyma20g34040.1                                                        51   8e-07
Glyma10g33560.1                                                        51   9e-07

>Glyma10g33560.2 
          Length = 694

 Score = 50.8 bits (120), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 49/119 (41%), Positives = 59/119 (49%), Gaps = 22/119 (18%)

Query: 4   VLGSDVYI-DGVCTRGSDAEPNVQVGCGDSVESYSVVDTTSSYIEVPIMANVGADGALDH 62
           VLGSD+   DGVCTR  DAE N  VG   S E    V+ +             A  AL  
Sbjct: 29  VLGSDLCTEDGVCTREGDAELNGDVGFDGSKEEGKGVNPSGGE----------AAEALGE 78

Query: 63  GVSNTRRDNAFRCSLTGSSVGGENDCGALEDGNDVTLETLDEQQNIANSHGHKIMEKEA 121
           G    R       SL G S   EN+   L DGND TL+TLDE++NI +    K++EKEA
Sbjct: 79  GSQVVR-------SLEGKS---ENEIAEL-DGNDATLKTLDEKKNINDRKVKKLVEKEA 126


>Glyma20g34040.1 
          Length = 868

 Score = 50.8 bits (120), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 48/119 (40%), Positives = 61/119 (51%), Gaps = 22/119 (18%)

Query: 4   VLGSDVYIDGV-CTRGSDAEPNVQVGCGDSVESYSVVDTTSSYIEVPIMANVGADGALDH 62
           VLGSD+ I+GV CTR  DAE N  VG   S E    VD +            G + A   
Sbjct: 29  VLGSDLCIEGVVCTRERDAELNGDVGFDGSKEEGKGVDPS------------GGEAAEAL 76

Query: 63  GVSNTRRDNAFRCSLTGSSVGGENDCGALEDGNDVTLETLDEQQNIANSHGHKIMEKEA 121
           G      D+    SL   SV   N+   L DGN+ TL+TLDEQ+NI +   +K++EKEA
Sbjct: 77  G-----EDSQVLRSLESKSV---NEIAEL-DGNEATLKTLDEQKNIDDKEVNKLVEKEA 126


>Glyma10g33560.1 
          Length = 823

 Score = 50.8 bits (120), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 49/119 (41%), Positives = 59/119 (49%), Gaps = 22/119 (18%)

Query: 4   VLGSDVYI-DGVCTRGSDAEPNVQVGCGDSVESYSVVDTTSSYIEVPIMANVGADGALDH 62
           VLGSD+   DGVCTR  DAE N  VG   S E    V+ +             A  AL  
Sbjct: 29  VLGSDLCTEDGVCTREGDAELNGDVGFDGSKEEGKGVNPSGGE----------AAEALGE 78

Query: 63  GVSNTRRDNAFRCSLTGSSVGGENDCGALEDGNDVTLETLDEQQNIANSHGHKIMEKEA 121
           G    R       SL G S   EN+   L DGND TL+TLDE++NI +    K++EKEA
Sbjct: 79  GSQVVR-------SLEGKS---ENEIAEL-DGNDATLKTLDEKKNINDRKVKKLVEKEA 126