Miyakogusa Predicted Gene
- Lj6g3v0156180.2
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj6g3v0156180.2 Non Chatacterized Hit- tr|I1JDJ8|I1JDJ8_SOYBN
Uncharacterized protein OS=Glycine max PE=4 SV=1,78.33,3e-19,WD40,WD40
repeat; WD_REPEATS_2,WD40 repeat;
WD_REPEATS_REGION,WD40-repeat-containing domain; WD_REPE,CUFF.57567.2
(66 letters)
Database: Glyma1.pep
75,778 sequences; 25,431,882 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Glyma02g09620.1 100 3e-22
Glyma10g22670.1 88 2e-18
Glyma11g01450.1 64 3e-11
Glyma01g43980.1 63 7e-11
Glyma08g24480.1 60 6e-10
Glyma03g36300.1 59 8e-10
Glyma11g02990.1 55 1e-08
Glyma17g14220.1 54 3e-08
Glyma05g03710.1 54 3e-08
Glyma18g04240.1 54 5e-08
Glyma11g34060.1 54 5e-08
Glyma01g42380.1 53 7e-08
>Glyma02g09620.1
Length = 287
Score = 100 bits (249), Expect = 3e-22, Method: Composition-based stats.
Identities = 48/60 (80%), Positives = 53/60 (88%)
Query: 1 MNKVGGLDPHASRVLHLSQSPDGLTVVSAGADETLRFWDIFGPPATDTSKISHLDNLLSL 60
M KVGGLD HASRVLHL QSPDGLTVVS GAD+TLRF D+FGPP +TS+IS+LDNLLSL
Sbjct: 228 MTKVGGLDCHASRVLHLCQSPDGLTVVSVGADKTLRFSDVFGPPVNNTSEISNLDNLLSL 287
>Glyma10g22670.1
Length = 301
Score = 88.2 bits (217), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 39/44 (88%), Positives = 41/44 (93%)
Query: 1 MNKVGGLDPHASRVLHLSQSPDGLTVVSAGADETLRFWDIFGPP 44
M KVGGLD HASRVLHL QSPDGLTVVSAGADE+LRFWD+FGPP
Sbjct: 258 MTKVGGLDRHASRVLHLCQSPDGLTVVSAGADESLRFWDVFGPP 301
>Glyma11g01450.1
Length = 455
Score = 64.3 bits (155), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 28/44 (63%), Positives = 34/44 (77%)
Query: 1 MNKVGGLDPHASRVLHLSQSPDGLTVVSAGADETLRFWDIFGPP 44
M K+ L+ H SRVL ++QSPDG TV SA ADETLRFW++FG P
Sbjct: 390 MVKMAELNGHTSRVLFMAQSPDGCTVASAAADETLRFWNVFGAP 433
>Glyma01g43980.1
Length = 455
Score = 63.2 bits (152), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 28/44 (63%), Positives = 33/44 (75%)
Query: 1 MNKVGGLDPHASRVLHLSQSPDGLTVVSAGADETLRFWDIFGPP 44
M K+ L H SRVL ++QSPDG TV SA ADETLRFW++FG P
Sbjct: 390 MVKMAELTGHTSRVLFMAQSPDGCTVASAAADETLRFWNVFGAP 433
>Glyma08g24480.1
Length = 457
Score = 59.7 bits (143), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 26/44 (59%), Positives = 32/44 (72%)
Query: 1 MNKVGGLDPHASRVLHLSQSPDGLTVVSAGADETLRFWDIFGPP 44
M K L H SRVL+++QSP+G TV SA DETLRFW++FG P
Sbjct: 393 MLKKAELKGHTSRVLYMAQSPNGCTVASAAGDETLRFWNVFGTP 436
>Glyma03g36300.1
Length = 457
Score = 59.3 bits (142), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 28/64 (43%), Positives = 39/64 (60%), Gaps = 7/64 (10%)
Query: 1 MNKVGGLDPHASRVLHLSQSPDGLTVVSAGADETLRFWDIFG-------PPATDTSKISH 53
M K+ L H SRVL+++QSP+G TV SA DETLRFW++FG P T +H
Sbjct: 393 MLKMAELKGHTSRVLYMAQSPNGCTVASAAGDETLRFWNVFGTAQASKPAPTASTDPFAH 452
Query: 54 LDNL 57
++ +
Sbjct: 453 VNRI 456
>Glyma11g02990.1
Length = 452
Score = 55.5 bits (132), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 24/41 (58%), Positives = 30/41 (73%)
Query: 1 MNKVGGLDPHASRVLHLSQSPDGLTVVSAGADETLRFWDIF 41
M+K+ L H RVL+L+ SPDG T+VS DETLRFWD+F
Sbjct: 390 MSKLATLTGHTYRVLYLAISPDGQTIVSGAGDETLRFWDVF 430
>Glyma17g14220.1
Length = 465
Score = 54.3 bits (129), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 23/49 (46%), Positives = 33/49 (67%)
Query: 1 MNKVGGLDPHASRVLHLSQSPDGLTVVSAGADETLRFWDIFGPPATDTS 49
M+K+ L H RVL+L+ SPDG T+V+ DETLRFW++F P + +
Sbjct: 402 MSKLATLTGHTYRVLYLAISPDGQTIVTGAGDETLRFWNVFPSPKSQNT 450
>Glyma05g03710.1
Length = 465
Score = 53.9 bits (128), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 23/49 (46%), Positives = 33/49 (67%)
Query: 1 MNKVGGLDPHASRVLHLSQSPDGLTVVSAGADETLRFWDIFGPPATDTS 49
M+K+ L H RVL+L+ SPDG T+V+ DETLRFW++F P + +
Sbjct: 402 MSKLATLTGHTYRVLYLAISPDGQTIVTGAGDETLRFWNVFPSPKSQNT 450
>Glyma18g04240.1
Length = 526
Score = 53.5 bits (127), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 22/41 (53%), Positives = 31/41 (75%)
Query: 1 MNKVGGLDPHASRVLHLSQSPDGLTVVSAGADETLRFWDIF 41
++KV L H+ RVL+L+ SPDG T+V+ DETLRFW++F
Sbjct: 463 LSKVATLTGHSMRVLYLAMSPDGQTIVTGAGDETLRFWNVF 503
>Glyma11g34060.1
Length = 508
Score = 53.5 bits (127), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 22/41 (53%), Positives = 30/41 (73%)
Query: 1 MNKVGGLDPHASRVLHLSQSPDGLTVVSAGADETLRFWDIF 41
+ KV L H+ RVL+L+ SPDG T+V+ DETLRFW++F
Sbjct: 445 LTKVATLTGHSMRVLYLAMSPDGQTIVTGAGDETLRFWNVF 485
>Glyma01g42380.1
Length = 459
Score = 53.1 bits (126), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 22/41 (53%), Positives = 30/41 (73%)
Query: 1 MNKVGGLDPHASRVLHLSQSPDGLTVVSAGADETLRFWDIF 41
M+K+ L H RVL+L+ SPDG T+V+ DETLRFW++F
Sbjct: 396 MSKLATLTGHTYRVLYLAISPDGQTIVTGAGDETLRFWNVF 436