Miyakogusa Predicted Gene
- Lj6g3v0156070.2
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj6g3v0156070.2 Non Chatacterized Hit- tr|D7KTV1|D7KTV1_ARALL
Putative uncharacterized protein OS=Arabidopsis
lyrata,40.71,5e-19,SUBFAMILY NOT NAMED,NULL; FAMILY NOT NAMED,NULL;
seg,NULL,CUFF.57643.2
(252 letters)
Database: Glyma1.pep
75,778 sequences; 25,431,882 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Glyma10g01210.1 429 e-121
Glyma02g01160.1 424 e-119
Glyma15g21860.2 212 3e-55
Glyma15g21860.1 212 3e-55
Glyma07g36180.1 209 2e-54
Glyma09g09790.1 194 8e-50
Glyma17g04400.1 193 1e-49
Glyma07g19770.1 103 2e-22
Glyma20g00900.1 102 3e-22
Glyma13g28460.1 70 2e-12
Glyma15g10620.1 70 3e-12
>Glyma10g01210.1
Length = 687
Score = 429 bits (1104), Expect = e-121, Method: Compositional matrix adjust.
Identities = 201/244 (82%), Positives = 218/244 (89%)
Query: 1 MVPTLLSNGSQGSPTDIRQHQTVSMNKMQQEVVHAHDARATDQQLMSYIKPSISNTPPAY 60
M+ TL SNGSQGSPTD RQH+TVS+ KMQQ+V+HAHDARA DQQ+ S IKPS+SN+PPAY
Sbjct: 319 MMSTLFSNGSQGSPTDTRQHETVSIAKMQQQVMHAHDARAADQQITSSIKPSMSNSPPAY 378
Query: 61 AEARDSTAGQIKMNNFDLNDIYIDSDDGIEDLERLPGTTNHVTSSLDYPWTQQDSHQSSP 120
+EARDSTAGQIKMNNFDLNDIYIDSDDG+EDLERLP +TN VTSSLDYPW QQDSHQSSP
Sbjct: 379 SEARDSTAGQIKMNNFDLNDIYIDSDDGMEDLERLPVSTNLVTSSLDYPWAQQDSHQSSP 438
Query: 121 PQTSRNXXXXXXXXXXXXTGEAQCRTDRIVFKLFGKEPSDFPLILRAQILDWLSHSPTDI 180
PQTS N +GEAQ RTDRIVFKLFGKEP+DFPL+LRAQILDWLSHSPTD+
Sbjct: 439 PQTSGNSDSASAQSPSSFSGEAQSRTDRIVFKLFGKEPNDFPLVLRAQILDWLSHSPTDM 498
Query: 181 ESYIRPGCIVLTIYLRQAEAVWEEICYDLTSSLGRLLDVSDDTFWRTGWVHIRVQHQMAF 240
ESYIRPGCIVLTIYLRQAEA+WEE+CYDLTSSL RLLDVSDDTFWR GWVHIRVQHQMAF
Sbjct: 499 ESYIRPGCIVLTIYLRQAEALWEELCYDLTSSLNRLLDVSDDTFWRNGWVHIRVQHQMAF 558
Query: 241 IFNG 244
IFNG
Sbjct: 559 IFNG 562
>Glyma02g01160.1
Length = 936
Score = 424 bits (1090), Expect = e-119, Method: Compositional matrix adjust.
Identities = 200/244 (81%), Positives = 219/244 (89%)
Query: 1 MVPTLLSNGSQGSPTDIRQHQTVSMNKMQQEVVHAHDARATDQQLMSYIKPSISNTPPAY 60
M+ TL SNGSQGSP++IRQH+TVSM KMQQ+V+HAHDA A+DQQ+ S IKPS+SN+PPAY
Sbjct: 264 MMSTLFSNGSQGSPSNIRQHETVSMAKMQQQVMHAHDAGASDQQITSSIKPSMSNSPPAY 323
Query: 61 AEARDSTAGQIKMNNFDLNDIYIDSDDGIEDLERLPGTTNHVTSSLDYPWTQQDSHQSSP 120
+EARDSTAGQIKMNNFDLNDIYIDSDDG+EDLERLP +TN VTSSLDYPW QQDSHQSSP
Sbjct: 324 SEARDSTAGQIKMNNFDLNDIYIDSDDGMEDLERLPVSTNLVTSSLDYPWAQQDSHQSSP 383
Query: 121 PQTSRNXXXXXXXXXXXXTGEAQCRTDRIVFKLFGKEPSDFPLILRAQILDWLSHSPTDI 180
PQTS N +GEAQ RTDRIVFKLFGKEP+DFPL+LRAQILDWLSHSPTD+
Sbjct: 384 PQTSGNSDSASAQSPSSSSGEAQSRTDRIVFKLFGKEPNDFPLVLRAQILDWLSHSPTDM 443
Query: 181 ESYIRPGCIVLTIYLRQAEAVWEEICYDLTSSLGRLLDVSDDTFWRTGWVHIRVQHQMAF 240
ESYIRPGCIVLTIYLRQAEA+WEE+CYDLTSSL RLLDVSDDTFWR GWVHIRVQHQMAF
Sbjct: 444 ESYIRPGCIVLTIYLRQAEALWEELCYDLTSSLNRLLDVSDDTFWRNGWVHIRVQHQMAF 503
Query: 241 IFNG 244
IFNG
Sbjct: 504 IFNG 507
>Glyma15g21860.2
Length = 1032
Score = 212 bits (540), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 112/237 (47%), Positives = 150/237 (63%), Gaps = 8/237 (3%)
Query: 14 PTDIRQHQTVSMNKMQQEVVHAHD-----ARATDQQLMSYIKPSISNTPPAYAEARDSTA 68
P + Q +T N M +E + + + ++ L + + S+ + PP A+ +T
Sbjct: 339 PESLVQCETTPANDMAKECIASGNDEVGSLKSPSVPLSTNVLLSMDSLPPQSIAAQ-TTV 397
Query: 69 GQIKMNNFDLNDIYIDSDDGIEDLERLPGTTNHVTSSLDYPW-TQQDSHQSSPPQTSRNX 127
G+I ++N DLN++Y D D +E+ SLD+P Q DS +SSPPQTSRN
Sbjct: 398 GRIGLSNIDLNNVYDDVQDYVENTRNCRPPLPSGNGSLDHPLLVQCDSLKSSPPQTSRNS 457
Query: 128 XXXXXXXXXXXTGEAQCRTDRIVFKLFGKEPSDFPLILRAQILDWLSHSPTDIESYIRPG 187
+GEAQ RTDRIVFKLFGK P+DFP LR+QIL+WLSHSPT+IESYIRPG
Sbjct: 458 DSTSTQSPSSSSGEAQSRTDRIVFKLFGKAPNDFPHALRSQILNWLSHSPTEIESYIRPG 517
Query: 188 CIVLTIYLRQAEAVWEEICYDLTSSLGRLLDVSDDTFWRTGWVHIRVQHQMAFIFNG 244
CI+LTIYLR + WEE+CY+L SL R L S+D FWRTGW++ RVQH +AF++NG
Sbjct: 518 CIMLTIYLRLENSAWEELCYNLGPSL-RKLAASNDCFWRTGWIYTRVQHSVAFLYNG 573
>Glyma15g21860.1
Length = 1032
Score = 212 bits (540), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 112/237 (47%), Positives = 150/237 (63%), Gaps = 8/237 (3%)
Query: 14 PTDIRQHQTVSMNKMQQEVVHAHD-----ARATDQQLMSYIKPSISNTPPAYAEARDSTA 68
P + Q +T N M +E + + + ++ L + + S+ + PP A+ +T
Sbjct: 339 PESLVQCETTPANDMAKECIASGNDEVGSLKSPSVPLSTNVLLSMDSLPPQSIAAQ-TTV 397
Query: 69 GQIKMNNFDLNDIYIDSDDGIEDLERLPGTTNHVTSSLDYPW-TQQDSHQSSPPQTSRNX 127
G+I ++N DLN++Y D D +E+ SLD+P Q DS +SSPPQTSRN
Sbjct: 398 GRIGLSNIDLNNVYDDVQDYVENTRNCRPPLPSGNGSLDHPLLVQCDSLKSSPPQTSRNS 457
Query: 128 XXXXXXXXXXXTGEAQCRTDRIVFKLFGKEPSDFPLILRAQILDWLSHSPTDIESYIRPG 187
+GEAQ RTDRIVFKLFGK P+DFP LR+QIL+WLSHSPT+IESYIRPG
Sbjct: 458 DSTSTQSPSSSSGEAQSRTDRIVFKLFGKAPNDFPHALRSQILNWLSHSPTEIESYIRPG 517
Query: 188 CIVLTIYLRQAEAVWEEICYDLTSSLGRLLDVSDDTFWRTGWVHIRVQHQMAFIFNG 244
CI+LTIYLR + WEE+CY+L SL R L S+D FWRTGW++ RVQH +AF++NG
Sbjct: 518 CIMLTIYLRLENSAWEELCYNLGPSL-RKLAASNDCFWRTGWIYTRVQHSVAFLYNG 573
>Glyma07g36180.1
Length = 989
Score = 209 bits (533), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 114/249 (45%), Positives = 157/249 (63%), Gaps = 13/249 (5%)
Query: 5 LLSNG--SQGSPTDIRQHQTVSMNKMQQEVVHAHDARATDQQLMSYIKPSISN------T 56
L NG +Q P + Q++T + N M Q+ + + D L P +SN +
Sbjct: 291 LTDNGIIAQDPPMSVVQYETPA-NGMTQKCIASGDGVGN---LKPPSGPLLSNVCEPRDS 346
Query: 57 PPAYAEARDSTAGQIKMNNFDLNDIYIDSDDGIEDLERLPGTTNHVTSSLDYP-WTQQDS 115
P+ ++ G+ +NN DLN++Y D + +E+ ++ +D+ W Q DS
Sbjct: 347 VPSQLTTAETKVGRGNLNNIDLNNVYNDIQNTVENHKKPYPPVASGMGFIDHASWLQCDS 406
Query: 116 HQSSPPQTSRNXXXXXXXXXXXXTGEAQCRTDRIVFKLFGKEPSDFPLILRAQILDWLSH 175
+SSPPQTSRN +GEAQ RTDRIVFKLFGK+PSDFPL+LR+QIL+WLS
Sbjct: 407 LKSSPPQTSRNSDSTSTQSPSSSSGEAQSRTDRIVFKLFGKDPSDFPLLLRSQILNWLSR 466
Query: 176 SPTDIESYIRPGCIVLTIYLRQAEAVWEEICYDLTSSLGRLLDVSDDTFWRTGWVHIRVQ 235
SPT+IESYIRPGCI+LTIYLR ++ WEE+ +L SSL +LL S+D+FWRTGWV+ RVQ
Sbjct: 467 SPTEIESYIRPGCIILTIYLRLEKSAWEELYCNLGSSLRKLLAASNDSFWRTGWVYARVQ 526
Query: 236 HQMAFIFNG 244
H +AF++NG
Sbjct: 527 HAVAFLYNG 535
>Glyma09g09790.1
Length = 953
Score = 194 bits (493), Expect = 8e-50, Method: Compositional matrix adjust.
Identities = 91/141 (64%), Positives = 109/141 (77%), Gaps = 2/141 (1%)
Query: 105 SLDYP-WTQQDSHQSSPPQTSRNXXXXXXXXXXXXTGEAQCRTDRIVFKLFGKEPSDFPL 163
SLD+P W Q DS +SSPPQTSRN +GEAQ RTDRIVFKLFGK P+DFP
Sbjct: 354 SLDHPLWIQCDSLKSSPPQTSRNSDSTSTQSPSSSSGEAQSRTDRIVFKLFGKAPNDFPH 413
Query: 164 ILRAQILDWLSHSPTDIESYIRPGCIVLTIYLRQAEAVWEEICYDLTSSLGRLLDVSDDT 223
LR+QIL+WLSHSPT+IESYIRPGCI+LTIYLR + WEE+CY+L SSL R L +D+
Sbjct: 414 ALRSQILNWLSHSPTEIESYIRPGCIILTIYLRLENSAWEELCYNLESSL-RKLAAPNDS 472
Query: 224 FWRTGWVHIRVQHQMAFIFNG 244
FWRTGW++ RVQH +AF++NG
Sbjct: 473 FWRTGWIYTRVQHSVAFLYNG 493
>Glyma17g04400.1
Length = 946
Score = 193 bits (491), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 92/161 (57%), Positives = 121/161 (75%), Gaps = 1/161 (0%)
Query: 85 SDDGIEDLERLPGTTNHVTSSLDYP-WTQQDSHQSSPPQTSRNXXXXXXXXXXXXTGEAQ 143
S++ +E+ ++ V S+D W Q+DS +SSPPQTSRN +GEAQ
Sbjct: 365 SNNTVENHKKPYPPVASVMGSIDRASWLQRDSLKSSPPQTSRNSDSTSIQSPSSSSGEAQ 424
Query: 144 CRTDRIVFKLFGKEPSDFPLILRAQILDWLSHSPTDIESYIRPGCIVLTIYLRQAEAVWE 203
RTDRIVFKLFGK+PSDFPL++R+QIL+WLSHSPT++ESYIRPGCI+LTIYLR ++ WE
Sbjct: 425 SRTDRIVFKLFGKDPSDFPLLIRSQILNWLSHSPTEMESYIRPGCIILTIYLRLEKSAWE 484
Query: 204 EICYDLTSSLGRLLDVSDDTFWRTGWVHIRVQHQMAFIFNG 244
E+ +L SSL +LL S+D+FWRTGWV+ RVQH +AF++NG
Sbjct: 485 ELYCNLGSSLRKLLAESNDSFWRTGWVYARVQHSVAFLYNG 525
>Glyma07g19770.1
Length = 1019
Score = 103 bits (257), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 53/119 (44%), Positives = 67/119 (56%)
Query: 110 WTQQDSHQSSPPQTSRNXXXXXXXXXXXXTGEAQCRTDRIVFKLFGKEPSDFPLILRAQI 169
W QQ S S P + +AQ RT RI+FKLF K PS FP LRAQI
Sbjct: 449 WIQQPSSLQSVPFQAGYTSSGSDHSPPSLNSDAQDRTGRIMFKLFDKHPSHFPGTLRAQI 508
Query: 170 LDWLSHSPTDIESYIRPGCIVLTIYLRQAEAVWEEICYDLTSSLGRLLDVSDDTFWRTG 228
+WLS+ P+D+ESYIRPGC+VL+IY + A WE + + + L+ SD FWR G
Sbjct: 509 YNWLSNRPSDMESYIRPGCVVLSIYASMSSADWERLEENFLQHVHSLIQNSDSDFWRNG 567
>Glyma20g00900.1
Length = 1009
Score = 102 bits (255), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 47/88 (53%), Positives = 61/88 (69%)
Query: 141 EAQCRTDRIVFKLFGKEPSDFPLILRAQILDWLSHSPTDIESYIRPGCIVLTIYLRQAEA 200
+AQ RT RI+FKLF K PS FP LRAQI +WLS+ P+D+ESYIRPGC+VL+IY + A
Sbjct: 470 DAQDRTGRIMFKLFDKHPSHFPGTLRAQIYNWLSNRPSDMESYIRPGCVVLSIYASMSSA 529
Query: 201 VWEEICYDLTSSLGRLLDVSDDTFWRTG 228
WE++ + + L+ SD FWR G
Sbjct: 530 DWEKLEENFLQHVHSLIQNSDSDFWRNG 557
>Glyma13g28460.1
Length = 628
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 29/67 (43%), Positives = 42/67 (62%)
Query: 142 AQCRTDRIVFKLFGKEPSDFPLILRAQILDWLSHSPTDIESYIRPGCIVLTIYLRQAEAV 201
+ C+T RI FKL+ P++FP LR QI WL+ P ++E YIRPGC +LTI++ +
Sbjct: 279 SMCQTGRISFKLYDWNPAEFPRRLRHQIFQWLASMPVELEGYIRPGCTILTIFIAMPNIM 338
Query: 202 WEEICYD 208
W + D
Sbjct: 339 WINLLKD 345
>Glyma15g10620.1
Length = 791
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 27/59 (45%), Positives = 40/59 (67%)
Query: 144 CRTDRIVFKLFGKEPSDFPLILRAQILDWLSHSPTDIESYIRPGCIVLTIYLRQAEAVW 202
C+T RI FKL+ P++FP LR QI WL++ P ++E YIRPGC +LT+++ +W
Sbjct: 308 CQTGRISFKLYDWNPAEFPRRLRHQIFQWLANMPVELEGYIRPGCTILTVFIAMPNIMW 366