Miyakogusa Predicted Gene

Lj6g3v0085390.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj6g3v0085390.1 Non Chatacterized Hit- tr|K4BYD3|K4BYD3_SOLLC
Uncharacterized protein OS=Solanum lycopersicum
GN=Sol,44.17,1e-18,seg,NULL,CUFF.57482.1
         (125 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma18g01520.1                                                       132   8e-32
Glyma11g37570.1                                                       124   2e-29

>Glyma18g01520.1 
          Length = 1133

 Score =  132 bits (332), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 63/100 (63%), Positives = 74/100 (74%), Gaps = 1/100 (1%)

Query: 24  VFIDTNLDTHLAVPVYEHDTVSDLKKRIESEHPSCFPKFGHIHIHGIKVHRTGYIYDLSD 83
           VFIDTNLDTHLA+ V + DTVSDLKK I SEHP CFPK G + IHGIKV R GY Y L+D
Sbjct: 11  VFIDTNLDTHLALVVSDLDTVSDLKKSILSEHPLCFPKIGQVQIHGIKVERKGYFYHLTD 70

Query: 84  SMSVTNAFNGFNDGWFLTVEASSLGEEATQSDQLITHASP 123
           SM V +AF G N  WFL+V+ S L  E +Q++QL +H SP
Sbjct: 71  SMPVRSAFRGINGSWFLSVDVSVL-RECSQNEQLFSHGSP 109


>Glyma11g37570.1 
          Length = 1032

 Score =  124 bits (312), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 61/96 (63%), Positives = 71/96 (73%), Gaps = 1/96 (1%)

Query: 24  VFIDTNLDTHLAVPVYEHDTVSDLKKRIESEHPSCFPKFGHIHIHGIKVHRTGYIYDLSD 83
           VFIDTNLDTHLA+ V + DTVS+LKK I SEHP CFPK G I IHGIKV R GY Y L+D
Sbjct: 11  VFIDTNLDTHLALVVSDLDTVSNLKKSILSEHPLCFPKIGKIQIHGIKVERKGYFYHLTD 70

Query: 84  SMSVTNAFNGFNDGWFLTVEASSLGEEATQSDQLIT 119
           SM V +AF+G  + WFLTV+ S L  E  Q+DQL +
Sbjct: 71  SMPVRSAFSGVKESWFLTVDVSVL-RECAQNDQLFS 105