Miyakogusa Predicted Gene

Lj6g3v0085380.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj6g3v0085380.1 Non Chatacterized Hit- tr|K4BRZ9|K4BRZ9_SOLLC
Uncharacterized protein OS=Solanum lycopersicum
GN=Sol,38.6,7e-19,seg,NULL,CUFF.57484.1
         (293 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma10g26720.1                                                       266   2e-71

>Glyma10g26720.1 
          Length = 293

 Score =  266 bits (680), Expect = 2e-71,   Method: Compositional matrix adjust.
 Identities = 150/258 (58%), Positives = 172/258 (66%), Gaps = 18/258 (6%)

Query: 46  VSCSSNKIPRWDSNAETFPPRNFSRANSQXXXXXXXXXXX-FGNKRRWWSDDS------- 97
           VSCSSNK  RWDSNAETF PRNF+  + +            FG KRRWWSD+        
Sbjct: 44  VSCSSNK--RWDSNAETFRPRNFTPNDVRKGQEQEQELKEGFGKKRRWWSDEDREFEDKE 101

Query: 98  -PGIETESSGIWEDAIDNMWIFKIFKSYGWTLPIILASWLLATGPKALLMTLAIPLGQSA 156
              +E  SSGI EDAID++W  +IFKSYGWTLP+IL SWL+++GPKA LM L +PLGQSA
Sbjct: 102 EEVVEETSSGILEDAIDSVWFLQIFKSYGWTLPVILMSWLISSGPKAFLMALILPLGQSA 161

Query: 157 LALAFEKLWGRSESXXXXXXXXXXXXXTANGNRVXXXXXXXXXXXXXXXXXYQSWVVENN 216
           LALAFEKLWG SE                N  RV                 YQSWVVE+ 
Sbjct: 162 LALAFEKLWGPSERKPKRKYRMRRKPRVRNYTRVEEEPEEKQKTKKG----YQSWVVEDK 217

Query: 217 GSVGTDRGNREA-PSFGGWDELERSRPATRSSRAMGGSQRMPTEAGRLSRRERKSDTPLL 275
           GSV  D G+REA PSFGGWD+LERSRPAT+SSR M GS+R P E GRLSRR+RKSDTPLL
Sbjct: 218 GSV--DTGSREAAPSFGGWDDLERSRPATKSSRGMDGSRRTPMEGGRLSRRQRKSDTPLL 275

Query: 276 LRLLIAVFPFLGSWTKML 293
           LR+L A+FPFLG+WTKML
Sbjct: 276 LRVLFAIFPFLGTWTKML 293