Miyakogusa Predicted Gene

Lj6g3v0084320.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj6g3v0084320.1 Non Chatacterized Hit- tr|B9SLQ1|B9SLQ1_RICCO
Putative uncharacterized protein OS=Ricinus communis
G,50.59,2e-18,SUBFAMILY NOT NAMED,NULL; UNCHARACTERIZED,NULL; no
description,NULL; Methyltransf_18,NULL; S-adenosy,CUFF.57478.1
         (347 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma10g26750.1                                                       608   e-174
Glyma20g04330.1                                                        91   2e-18
Glyma10g10060.1                                                        82   8e-16

>Glyma10g26750.1 
          Length = 423

 Score =  608 bits (1567), Expect = e-174,   Method: Compositional matrix adjust.
 Identities = 283/347 (81%), Positives = 311/347 (89%), Gaps = 7/347 (2%)

Query: 1   MHWSRMERWLQQRCEEVHPGYGDGGILRVLGYQWRVLRFNDDTRQSTAKVMLAYNQNNPD 60
           MHWS MERWLQQRCEEVHPGY DGG LR+LGYQWRVLRFN+ TRQSTAKVM AY +N P 
Sbjct: 71  MHWSGMERWLQQRCEEVHPGYKDGGKLRILGYQWRVLRFNEVTRQSTAKVMAAYRENTPG 130

Query: 61  LVYLMQQPHCLAVPYVKSMVAAGLTTIASCNFDIISARQGKKNMHILCVGHGGGSLPLFL 120
           +VYLMQQPHCLAVPYVKSMV+AGLTTIASC+FDIISA QGKKNMHILC+GHGGGSLPLFL
Sbjct: 131 VVYLMQQPHCLAVPYVKSMVSAGLTTIASCSFDIISALQGKKNMHILCIGHGGGSLPLFL 190

Query: 121 ASNIQGAIVHVVEIDPLVISASTRAMGFPAFSQMTQSGDRAIAKPDIIEEAMWKGVHERI 180
           AS IQGAIVHVVEIDPLVISAS RAMGFP FS MT+SGDRA+ KPDII+E MWKGVHERI
Sbjct: 191 ASRIQGAIVHVVEIDPLVISASIRAMGFPGFSLMTKSGDRAVTKPDIIDEVMWKGVHERI 250

Query: 181 YLHEADAEEFVVNNTNLYDMVFIDAYDGDDIFPHKLWDPNLPFLKALNSHLHPKHGTVVV 240
           +L+EADAEEF+VNNTN+YDM+F+DAYDG+DIFPHKLWDP+ PFLKAL++ LHPKHGTVVV
Sbjct: 251 FLYEADAEEFIVNNTNVYDMIFVDAYDGEDIFPHKLWDPDSPFLKALSNQLHPKHGTVVV 310

Query: 241 NLHSDSDTSNHDGSIPSGFEPILPMGKYVSQVCRAYKDVLIGTGSSCEEKMGSGIAFTVA 300
           NLHSDSD  NHDGS+PS  E ILPMGKYVSQVCRAYKDVL+G G       GSG+AFTVA
Sbjct: 311 NLHSDSDVLNHDGSVPSELEQILPMGKYVSQVCRAYKDVLVGKG-------GSGLAFTVA 363

Query: 301 VPWVCNTSLVVCRGFGTDGEYINRDLVVNTLISKSLEIEHIMDLPFS 347
           VPWVCNTSL+VCRGFG D +Y NRD  +NTLISKSLE+EH+M LPFS
Sbjct: 364 VPWVCNTSLIVCRGFGRDSKYFNRDFAINTLISKSLELEHVMGLPFS 410


>Glyma20g04330.1 
          Length = 76

 Score = 91.3 bits (225), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 44/54 (81%), Positives = 48/54 (88%), Gaps = 1/54 (1%)

Query: 76  VKSMVAAGLTTIASCNFDIISARQGKKNMHILCVGHGGG-SLPLFLASNIQGAI 128
           VKSMV+ GLTTIASC+F I+SA QGKKNMHILC+GHGGG SLPLFLAS IQG I
Sbjct: 18  VKSMVSVGLTTIASCSFVIMSALQGKKNMHILCIGHGGGRSLPLFLASRIQGEI 71


>Glyma10g10060.1 
          Length = 48

 Score = 82.0 bits (201), Expect = 8e-16,   Method: Composition-based stats.
 Identities = 37/47 (78%), Positives = 41/47 (87%)

Query: 79  MVAAGLTTIASCNFDIISARQGKKNMHILCVGHGGGSLPLFLASNIQ 125
           MV+ GL TI+SC+FDIISA QGKKNMHILC+GHGGG LPL LAS IQ
Sbjct: 1   MVSTGLITISSCSFDIISALQGKKNMHILCIGHGGGRLPLSLASRIQ 47