Miyakogusa Predicted Gene

Lj6g3v0060010.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj6g3v0060010.1 Non Chatacterized Hit- tr|D7KDF5|D7KDF5_ARALL
Putative uncharacterized protein OS=Arabidopsis
lyrata,38.5,1e-17,seg,NULL,CUFF.57459.1
         (259 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma20g34250.1                                                       184   1e-46
Glyma10g33390.1                                                       177   8e-45
Glyma10g26990.1                                                       139   3e-33
Glyma20g21380.1                                                       136   2e-32

>Glyma20g34250.1 
          Length = 455

 Score =  184 bits (466), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 111/194 (57%), Positives = 125/194 (64%), Gaps = 10/194 (5%)

Query: 9   DEISSPLSARIFELCNSELFPEALQNSEVTXXXXXXXXXXXXXAT-NTSLAIDVETKFXX 67
           DEISSPLSARIFELCN++ FPEALQNSEVT             AT N S+ +DV+ K   
Sbjct: 14  DEISSPLSARIFELCNTDFFPEALQNSEVTSSSNCCYEENSSYATTNISVTVDVDNKLNS 73

Query: 68  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXLSVIFDSQEDIDNDISASIDFTLSPAFNVGP 127
                                        LS+ FDSQE+IDNDISASIDF+LSP+FNV P
Sbjct: 74  NSNTVTTPTSTTTTNTNNNTTNSSN----LSIFFDSQEEIDNDISASIDFSLSPSFNVPP 129

Query: 128 FAP-SQQEQHFDFSSVQQNQVQLTASSVVEGFSHSQYPPDPVA-PLMGASLPPVFEEDCI 185
           F P S Q++ FDFSSVQ  QVQL A SVVEGF  +QYP D VA P MGA LP VFEEDCI
Sbjct: 130 FLPVSSQQEQFDFSSVQH-QVQLAACSVVEGF--TQYPTDAVAPPFMGAPLPSVFEEDCI 186

Query: 186 TAVPSYMPLIPSSP 199
           ++VPSYMPL PSSP
Sbjct: 187 SSVPSYMPLNPSSP 200


>Glyma10g33390.1 
          Length = 394

 Score =  177 bits (450), Expect = 8e-45,   Method: Compositional matrix adjust.
 Identities = 113/195 (57%), Positives = 124/195 (63%), Gaps = 12/195 (6%)

Query: 9   DEISSPLSARIFELCNSELFPEALQNSEVTXXXXXXXXXXXXXAT-NTSLAIDVETKFXX 67
           DEISSPLSARIFELCN++ FPE L NSEVT             AT N S+ +DV+ K   
Sbjct: 1   DEISSPLSARIFELCNTDFFPETLPNSEVTSSSNCCYEENSSYATTNISVTVDVDNKLNS 60

Query: 68  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXLSVIFDSQEDIDNDISASIDFTLSPAFNVGP 127
                                        LS+IFDSQE+IDNDISASIDF+LSP+FNV P
Sbjct: 61  NSNTVTTPTSTTTTNTNNNTTNSSN----LSIIFDSQEEIDNDISASIDFSLSPSFNVPP 116

Query: 128 FAP--SQQEQHFDFSSVQQNQVQLTASSVVEGFSHSQYPPDPVA-PLMGASLPPVFEEDC 184
           F P  SQQEQ FDFSSVQ  QVQL A SVVEGF  SQYP D VA P MGA LP VFEEDC
Sbjct: 117 FLPATSQQEQ-FDFSSVQH-QVQLAACSVVEGF--SQYPNDSVAPPFMGAPLPSVFEEDC 172

Query: 185 ITAVPSYMPLIPSSP 199
           I++VPSYM L PSSP
Sbjct: 173 ISSVPSYMALNPSSP 187


>Glyma10g26990.1 
          Length = 416

 Score =  139 bits (350), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 92/216 (42%), Positives = 120/216 (55%), Gaps = 15/216 (6%)

Query: 1   MLLTL-----NLQDEISSPLSARIFELCNSELFPEALQNSEVTXXXXXXXXXXXXXATNT 55
           MLLT+     +LQDEISSP+SARIFELC  + FP+ LQNS+VT             AT  
Sbjct: 1   MLLTMLICHHSLQDEISSPISARIFELCEPDFFPDTLQNSDVTSSSNCCHEEKSSYATTI 60

Query: 56  SLAIDV-----ETKFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLSVIFDSQEDIDND 110
           S  +D+                                        LS++FD+Q++IDND
Sbjct: 61  SPPLDLVDNKININNNSNIVTTTSSSTTTTSTTTNNNNNNTTNSNNLSILFDTQDEIDND 120

Query: 111 ISASIDFTLSPAFNVGPF-APSQQEQHFDFSSVQ-QNQVQLTASSVVEGFSHSQYPPDPV 168
           ISASIDF+   +  V P  + S Q+  FDFSS Q Q Q+   A SV++G SH  YP D V
Sbjct: 121 ISASIDFSSCRSLVVPPLLSISTQQDQFDFSSAQPQVQLSAAAGSVLKGLSH--YPTDHV 178

Query: 169 -APLMGASLPPVFEEDCITAVPSYMPLIPSSPTLLY 203
            APL+G+ LP VF+EDCI+++PSY+PL PSSP+  Y
Sbjct: 179 IAPLIGSPLPSVFDEDCISSIPSYVPLNPSSPSCSY 214


>Glyma20g21380.1 
          Length = 385

 Score =  136 bits (343), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 88/202 (43%), Positives = 114/202 (56%), Gaps = 24/202 (11%)

Query: 9   DEISSPLSARIFELCNSELFPEALQNSEVTXXXXXXXXXXXXXATNTSLAIDVETKFXXX 68
           DEIS P+SARIFELC+ + FP  LQNSEVT              ++++  +D   KF   
Sbjct: 1   DEISGPISARIFELCDPDFFPHTLQNSEVT--------------SSSNYVVD-NNKFNIN 45

Query: 69  XXXXXXXXXXXXXXXXXXXXXXXXXXXX----LSVIFDSQEDIDNDISASIDFTLSPAFN 124
                                           LS+ FD+Q++IDNDISASIDF+ SP+F 
Sbjct: 46  SNSSNIVTTTSSSTTTTSTTTNNNNNATNGNNLSIFFDTQDEIDNDISASIDFSSSPSFV 105

Query: 125 VGPFAP-SQQEQHFDFSSVQ-QNQVQLTASSVVEGFSHSQYPPDPV-APLMGASLPPVFE 181
           V P  P S Q+  FDF S Q Q Q+   A S++ G SH  YP DPV APL+GA LP VF+
Sbjct: 106 VPPLLPISTQQDQFDFPSAQPQVQLSTAAGSILTGLSH--YPTDPVIAPLIGAPLPSVFD 163

Query: 182 EDCITAVPSYMPLIPSSPTLLY 203
           +DCI+++PSY+PL PSSP+  Y
Sbjct: 164 DDCISSIPSYVPLNPSSPSCSY 185