Miyakogusa Predicted Gene

Lj6g3v0057850.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj6g3v0057850.1 Non Chatacterized Hit- tr|C6T3Z3|C6T3Z3_SOYBN
Putative uncharacterized protein (Fragment) OS=Glycine,30.64,2e-18,no
description,NULL; P34-Arc,Arp2/3 complex, 34kDa subunit p34-Arc;
coiled-coil,NULL; ARP2/3 COMPLEX,CUFF.57449.1
         (363 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma10g27630.1                                                       366   e-101
Glyma20g21550.1                                                       326   2e-89
Glyma08g32790.1                                                       209   3e-54
Glyma16g14750.1                                                       134   1e-31

>Glyma10g27630.1 
          Length = 257

 Score =  366 bits (939), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 172/201 (85%), Positives = 186/201 (92%)

Query: 163 YVKVIKEISTVQSAILSSQMKEILRNVNTDDAVQGMYKPLKLVYHPREPFFVIRQPQRIV 222
           Y KVIKEISTV S ILSSQ+KEIL NVN DDA+QGMYKP+KLVYHP++ FF+IRQPQRI+
Sbjct: 1   YDKVIKEISTVHSVILSSQLKEILWNVNFDDALQGMYKPIKLVYHPKDHFFLIRQPQRII 60

Query: 223 AVFPIRLREKSDVVIATAFFQELVDVGNSDKWAKAPPCTWSAIPPPELRGEAFEDLSTNG 282
           AVFPIR REKSDV+IATAFFQELVDVG+SDKWAK PPC WSAIPPPELRGEAFEDLSTNG
Sbjct: 61  AVFPIRFREKSDVIIATAFFQELVDVGSSDKWAKVPPCNWSAIPPPELRGEAFEDLSTNG 120

Query: 283 GFFSFDISSRHVEGNRLDKTVWNLLNFNAYVRYHVKSTKGFIQRRMRKRLENLVEVLHHT 342
           GFF+FDISSRHVEGNRLDKTVWNLLNFNAYVRYHVKSTKGFIQRRMRKRLE+LVEVLH T
Sbjct: 121 GFFTFDISSRHVEGNRLDKTVWNLLNFNAYVRYHVKSTKGFIQRRMRKRLESLVEVLHQT 180

Query: 343 ISEEKKQTQQHQGCRYSKKLV 363
             EE +QT+QHQ  RY+KKLV
Sbjct: 181 NLEENEQTKQHQVYRYTKKLV 201


>Glyma20g21550.1 
          Length = 223

 Score =  326 bits (836), Expect = 2e-89,   Method: Compositional matrix adjust.
 Identities = 159/217 (73%), Positives = 181/217 (83%), Gaps = 13/217 (5%)

Query: 72  AEKPMEIDHHLHEFGSVEYHIQSEASNPLVAYLSISIPPLCQGVLTNELSPNTIEMVKEL 131
           AEKP+EIDH L+EFGSVEYHIQS+ASNP VAYLSIS+ PLC GVL NELS  TIEMVK L
Sbjct: 3   AEKPLEIDHPLYEFGSVEYHIQSQASNPQVAYLSISMSPLCHGVLPNELSYYTIEMVKGL 62

Query: 132 CPRVMEIAEPARERYQLTLKLDLNQIPQSKDYVKVIKEISTVQSAILSSQMKEILRNVNT 191
           CP V+EIAEPA+E YQL LKL+LNQIP++KDY KVI EIST+ S ILSSQ+KEIL NVN+
Sbjct: 63  CPNVVEIAEPAKEGYQLALKLNLNQIPRNKDYDKVIMEISTIHSVILSSQLKEILWNVNS 122

Query: 192 DDAVQGMYKPLKLVYHPREPFFVIRQPQRIVAVFPIRLREKSDVVIATAFFQELVDVGNS 251
           DDA+QGMYKP+KL+YHP++ F +IRQPQRI+AVFPIR +EKSDV+IAT FFQ        
Sbjct: 123 DDALQGMYKPIKLLYHPKDLFVLIRQPQRIIAVFPIRFKEKSDVIIATNFFQ-------- 174

Query: 252 DKWAKAPPCTWSAIPPPELRGEAFEDLSTNGGFFSFD 288
                 PPC WSAIPPPELRGEAFEDLSTNGGFF F+
Sbjct: 175 -----VPPCNWSAIPPPELRGEAFEDLSTNGGFFIFE 206


>Glyma08g32790.1 
          Length = 324

 Score =  209 bits (533), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 108/301 (35%), Positives = 177/301 (58%), Gaps = 6/301 (1%)

Query: 62  LNQILLKLYRAEKPMEIDHHLHEFGSVEYHIQSEASNPLVAYLSISIP-PLCQGVLTNEL 120
           L  +L +    EK +E+DHH  EF  V YHIQ    NP V  LS+S+P P  + +    L
Sbjct: 12  LQTLLNRAQNLEKGVELDHHWVEFDDVRYHIQVSMKNPHVLLLSVSLPTPSSETIFVCGL 71

Query: 121 SPNTIEMVKELCPRVMEIAEPARERYQLTLKLDLNQIP--QSKDYVKVIKEISTVQSAIL 178
               IE +K     +++I +P R+ + LTLK++L+++P  Q + +  ++K +++++  +L
Sbjct: 72  PFGAIEAIKAAYGNLVQILDPPRDGFNLTLKINLSKLPANQEQKHAFLVK-VASIREVVL 130

Query: 179 SSQMKEILRNVNTDDAVQGMYKPLKLVYHPREPFFVIRQPQRIVAVFPIRLREKSDVVIA 238
            + ++ IL ++        M   + LV+ P E FF+  Q  ++  V+P+R  +  D+V+A
Sbjct: 131 GAPLRVILEHLAARTVALDMDPLVALVHRPNESFFLFPQADKVTVVYPMRFNDSIDIVLA 190

Query: 239 TAFFQELVDVGNSDKWAKAPPCTWSAIPPPELRGEAFEDLSTNGGFFSFDISSRHVEGNR 298
           T+F QE V+   +      PPC+WS  PP EL+    + LS N GF +F I  RHVEG +
Sbjct: 191 TSFLQEFVEARRTAGLNNTPPCSWSLTPPLELKEVPADALSANAGFVTFVIFPRHVEGQK 250

Query: 299 LDKTVWNLLNFNAYVRYHVKSTKGFIQRRMRKRLENLVEVLHHT--ISEEKKQTQQHQGC 356
           LD+TVWNL  F+AYV YHVK ++GF+  RMR+R+E+L++ L+     +E  K+T  ++  
Sbjct: 251 LDRTVWNLSTFHAYVSYHVKCSEGFMHTRMRRRVESLIQALNRAKPDAENSKKTSYNRSF 310

Query: 357 R 357
           +
Sbjct: 311 K 311


>Glyma16g14750.1 
          Length = 248

 Score =  134 bits (338), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 85/263 (32%), Positives = 129/263 (49%), Gaps = 34/263 (12%)

Query: 73  EKPMEIDHHLHEFGSVEYHIQSEASNPLVAYLSISIPPLCQGVLTNELSPNTIEMVKELC 132
           EK +E+DHH  EF  V YHIQ    NP V  LS+S+P           +P++  +     
Sbjct: 1   EKGVELDHHWVEFDDVRYHIQVSMKNPHVLLLSVSLP-----------TPSSETIFVSAY 49

Query: 133 PRVMEIAEPARERYQLTLKLDLNQIP--QSKDYVKVIKEIS------TVQSAILSSQMKE 184
             +++I +P R+ + LTLK++L+++P  Q   +  V   I       T+   +  S    
Sbjct: 50  GNLVQILDPPRDGFNLTLKINLSKLPANQVVSWPSVFANIICPTNNITIIIYLQHSHSSC 109

Query: 185 ILRNVNTDDAVQGMYKPLK-------LVYHPREPFF----VIRQPQRIVAVFPIRLREKS 233
           + R        Q    P+         ++  + PF      I    ++  V+P+R  +  
Sbjct: 110 VYRTKLDTQEYQTHINPVSSRMSIADFIWEIKIPFVDCATSILNADKVTVVYPMRFNDSI 169

Query: 234 DVVIATAFFQELVDVGNSDKWAKAPPCTWSAIPPPELRGEAFEDLSTNGGFFSFDISSRH 293
           D+V+AT+F QE V+   +      PPC+WS  PP EL+    E  + N GF +F I  RH
Sbjct: 170 DIVLATSFLQEFVEARRTAGLNNTPPCSWSLTPPLELK----EVPAANAGFVTFVIFPRH 225

Query: 294 VEGNRLDKTVWNLLNFNAYVRYH 316
           VEG +LD+TVWNL  F+AYV YH
Sbjct: 226 VEGQKLDRTVWNLSTFHAYVSYH 248