Miyakogusa Predicted Gene

Lj6g3v0025640.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj6g3v0025640.1 CUFF.57381.1
         (165 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma10g00790.1                                                       256   9e-69

>Glyma10g00790.1 
          Length = 165

 Score =  256 bits (653), Expect = 9e-69,   Method: Compositional matrix adjust.
 Identities = 125/165 (75%), Positives = 135/165 (81%)

Query: 1   MELNKGSTVARLQSVKRNSGKSYSELAEETGLTNVYVAQLLRRQAQLKPDTAPKLQAALP 60
           ME  K   VA LQ+VK NSGKSY++LAEETGLTNVYVAQLLRRQAQL P TAP L+AALP
Sbjct: 1   MEQKKAKIVAELQAVKHNSGKSYNQLAEETGLTNVYVAQLLRRQAQLNPQTAPLLRAALP 60

Query: 61  DLTDELVHEMMTPPLRSYDPNLIQDPTVYRLNEAVMHFGESIKEIINEDFGDGIMSAIDF 120
           DL  +LV EMM PPLRSYDPNLIQDPTVYRLNEAVMHFGESIKEIINE+FGDGIMSAIDF
Sbjct: 61  DLPQDLVSEMMRPPLRSYDPNLIQDPTVYRLNEAVMHFGESIKEIINEEFGDGIMSAIDF 120

Query: 121 FCSXXXXXXXXXXXXXXLTFDGKYLPHTEQITENMVSRTRPQGKQ 165
           +CS              LTFDGKYLPH+EQ +E+MVSRTRP GKQ
Sbjct: 121 YCSVDKIKGVDGKDRVVLTFDGKYLPHSEQKSEHMVSRTRPLGKQ 165