Miyakogusa Predicted Gene

Lj5g3v2298200.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj5g3v2298200.1 Non Chatacterized Hit- tr|A5AQQ0|A5AQQ0_VITVI
Putative uncharacterized protein OS=Vitis vinifera
GN=,37.13,2e-18,SUBFAMILY NOT NAMED,NULL; GEMIN2,Survival motor neuron
interacting protein 1; SIP1,NULL; coiled-coil,CUFF.57312.1
         (510 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma10g44220.1                                                       442   e-124
Glyma20g39000.1                                                       406   e-113

>Glyma10g44220.1 
          Length = 507

 Score =  442 bits (1137), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 257/473 (54%), Positives = 303/473 (64%), Gaps = 84/473 (17%)

Query: 76  SLGLGIEVIDETALLETIPRKITTAASKNARRRAXXXXXXXXXXXXQIRHHKKTVTAEEI 135
           SLGLGIEVIDETALL+++ +K     +KN                    +H+K+  + +I
Sbjct: 81  SLGLGIEVIDETALLDSVAKK--NGGTKN--------------------NHQKSQPSNKI 118

Query: 136 PVLRNSEAKGGKYSRKDMMALRFVNVAGQRRFWKTIYANLESGVAQEYDTLAVNVHHLPC 195
                      KYSRK++  LRF+N+A QR+FWK I+A  +S VA EYDTLA      P 
Sbjct: 119 --------GNRKYSRKELEGLRFLNMARQRKFWKAIHAAFQSTVAIEYDTLAST----PL 166

Query: 196 LPNKKPIL----------------------------GAESC--------ENVSPVDPSCS 219
            P+ KPIL                             AE+         +N + +   C 
Sbjct: 167 PPHNKPILIGFIVDLKDYFGHSNNDDALFFSSSFTLHAENYIVVFSIINKNFNFLSTLCH 226

Query: 220 HM-DEDGHSVLXX-XXXXXXXXXXYTSIQRPAFYVDGEPNFESGPPEDGWEYLRRVRWEA 277
           ++  EDG SV              Y SIQRPAF VDGEPNF+SGPPEDGWEYLRRVRWEA
Sbjct: 227 NLVSEDGCSVAKECSEEYDGSDDDYASIQRPAFMVDGEPNFDSGPPEDGWEYLRRVRWEA 286

Query: 278 GQIPKVKVAKLDRCKLNKEQSAYMPKIPDVAKCPEHLLPSKQWEDVFLAEFSSLRANLSC 337
            QIPKVKVAKLDR KLNKEQSAYMP+IPD+A CPE+LLP K+WEDVFLAEFS+LR N SC
Sbjct: 287 HQIPKVKVAKLDRGKLNKEQSAYMPQIPDIANCPEYLLPLKEWEDVFLAEFSALRRNFSC 346

Query: 338 LEGSSVMDSSSLQPVHSSQLVGNNCGESASVMNRDVLHSIDKAMDQLTINLTGEVKDTTQ 397
           L+GSS + S +L  VHSSQLVGNNCGE +S M+RDVL +     + L I  T +     Q
Sbjct: 347 LDGSSAIHSENLH-VHSSQLVGNNCGEFSSAMSRDVLLN-----NHLRIGKTND-----Q 395

Query: 398 PLKTGSKTSIDQTTPPLLSVVLGMDSVARVSMLLKRISLLESANTITRNDCMWLFALCAT 457
           P  + ++ + D+T  P       MDSVARVS LLKRI LLE+A T+TRNDCMWLFALCAT
Sbjct: 396 PSNSTAENN-DRTLSPENPEAKTMDSVARVSSLLKRIRLLEAAGTMTRNDCMWLFALCAT 454

Query: 458 VDAPLHADTSAALRSLLRKCASIRAGKAGLDEEAVMLNILATISGRYFGQSET 510
           VDAPL ADT A+LRSLLRKCASIRAGKAGLDEE VMLNILATISGRYFGQSE 
Sbjct: 455 VDAPLDADTCASLRSLLRKCASIRAGKAGLDEEVVMLNILATISGRYFGQSEN 507


>Glyma20g39000.1 
          Length = 382

 Score =  406 bits (1043), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 224/389 (57%), Positives = 256/389 (65%), Gaps = 71/389 (18%)

Query: 147 KYSRKDMMALRFVNVAGQRRFWKTIYANLESGVAQEYDTLAVNVHHLPCLPNKKPILGA- 205
           KYSRK++ +LRFVN+A QR+FWK I+A  ++ VA EYD LA +      LP+ KPIL   
Sbjct: 40  KYSRKELESLRFVNMARQRKFWKAIHAAFQTTVAMEYDALASSP-----LPHNKPILRKA 94

Query: 206 ------------------------ESCENVSPVDPSCSHMDEDGHSVLXXXXXXXXXXXX 241
                                    S   +  +D S  + + +  S L            
Sbjct: 95  LYSRLHCRFERLLWSFNNDDALFFSSFFTLYVLDFSIINNNFNFLSTLCEEDDGSDDD-- 152

Query: 242 YTSIQRPAFYVDGEPNFESGPPEDGWEYLRRVRWEAGQIPKVKVAKLDRCKLNKEQSAYM 301
           Y SIQRPAF VDGEPNF+SGPPEDGWEYLRRVRWEA QIPKVKVAKLDR KLNKEQSAYM
Sbjct: 153 YASIQRPAFMVDGEPNFDSGPPEDGWEYLRRVRWEAHQIPKVKVAKLDRGKLNKEQSAYM 212

Query: 302 PKIPDVAKCPEHLLPSKQWEDVFLAEFSSLRANLSCLEGSSVMDSSSLQPVHSSQLVGNN 361
           P+IPD+AKCPEHLLP K+WED FLAEFS+LR N SCL+GSS + S +L  VHSSQ+VGNN
Sbjct: 213 PQIPDIAKCPEHLLPLKEWEDAFLAEFSALRTNFSCLDGSSAIHSGNLH-VHSSQIVGNN 271

Query: 362 CGESASVMNRDVLHSIDKAMDQLTINLTGEVKDTTQPLKTGSKTSIDQTTPPLLSVVLGM 421
           CGE +SVM+RDVL             L   ++                         + M
Sbjct: 272 CGEFSSVMSRDVL-------------LNNHLR-------------------------IAM 293

Query: 422 DSVARVSMLLKRISLLESANTITRNDCMWLFALCATVDAPLHADTSAALRSLLRKCASIR 481
           DSVARVS LLKRI LLE+A+T+TRNDCMWLFALCATVDAPL ADT AALRSLLRKCASIR
Sbjct: 294 DSVARVSSLLKRIRLLEAADTMTRNDCMWLFALCATVDAPLDADTCAALRSLLRKCASIR 353

Query: 482 AGKAGLDEEAVMLNILATISGRYFGQSET 510
           AGKA LDEE VMLNILATISG YFGQSE 
Sbjct: 354 AGKAELDEEVVMLNILATISGSYFGQSEN 382