Miyakogusa Predicted Gene

Lj5g3v2298190.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj5g3v2298190.1 tr|C1EDN1|C1EDN1_MICSR Predicted protein
OS=Micromonas sp. (strain RCC299 / NOUM17)
GN=MICPUN_102962,29.97,6e-16,seg,NULL,CUFF.57327.1
         (430 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma20g39010.1                                                       457   e-129
Glyma10g44230.1                                                       174   1e-43
Glyma16g09290.1                                                       119   9e-27
Glyma10g19270.1                                                       115   1e-25
Glyma10g44240.1                                                        91   2e-18
Glyma07g07080.1                                                        68   2e-11

>Glyma20g39010.1 
          Length = 376

 Score =  457 bits (1177), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 246/378 (65%), Positives = 272/378 (71%), Gaps = 39/378 (10%)

Query: 62  VLDLTHLTPFQVLIPXXXXXXXXXXXXGKDAYRDLQTLFTLDDNRRLVVSCRPSTLHFVG 121
           V+DLT LT FQ                GKDAYRDLQTL TLD NRRLVVSCRPSTLHF+G
Sbjct: 27  VIDLTPLTAFQ-------SELRRFLSSGKDAYRDLQTLVTLDHNRRLVVSCRPSTLHFLG 79

Query: 122 TSAALTFLVLSVFRVLVQLVSGFGSWRRNASTYKPVV-RRDRSLGGKEVVIAWGESQSQS 180
           TSAALTFL  SVF VL QL+S F SWRRNAS++KPVV RRDRSLGGKEVV+AWG+ +S +
Sbjct: 80  TSAALTFLAFSVFTVLAQLISRFSSWRRNASSHKPVVVRRDRSLGGKEVVVAWGQ-RSDT 138

Query: 181 TPASRVQRTAI---AKNKV-RVEKKLPKWWPSVINNAAVVFDVNERDEYKREAYRVVRAI 236
            P S   R ++   AKNKV   ++KLPKWWP+VIN++A VFD NE++EYKREAYRV    
Sbjct: 139 NPLSAPVRDSVKRSAKNKVVPFQRKLPKWWPTVINSSASVFDANEQEEYKREAYRV---- 194

Query: 237 VDNRMGGRDISEDDIIRLRQLCRFSGVQVSVEPTNIRDSLYRASVNYVLDACSSAPTTST 296
                            LR+LCR SGVQVS+EPTNIRD+LYRASVN+VL+ CS APT ST
Sbjct: 195 -----------------LRRLCRTSGVQVSIEPTNIRDTLYRASVNFVLNVCSRAPTHST 237

Query: 297 SIDINGEDAQQFLAGFAENIGLENXXXXXXXXXXXXXSTRSRLLQAWALEMQGKHVDATV 356
           SIDINGEDA QFL GFAENIGLEN              TRS LLQAWALEMQGK VDA V
Sbjct: 238 SIDINGEDAPQFLTGFAENIGLENVRAATIVSAAVAARTRSCLLQAWALEMQGKQVDAMV 297

Query: 357 ELSKICLLLRIFXXXXXXXXXXXVSRGLQKHLKLEQRKHLMFLFGKVCGEDSHRIAREAL 416
           ELSKICLLLRIF           VSRGL+KHLKLEQR+HLMFLFGKVCGEDSHRIAREAL
Sbjct: 298 ELSKICLLLRIFPPEESSPEMEMVSRGLEKHLKLEQREHLMFLFGKVCGEDSHRIAREAL 357

Query: 417 GLMH-----SDQLEDKMA 429
           GL H     SDQ ED +A
Sbjct: 358 GLTHSPNGCSDQFEDNIA 375


>Glyma10g44230.1 
          Length = 254

 Score =  174 bits (442), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 114/251 (45%), Positives = 135/251 (53%), Gaps = 44/251 (17%)

Query: 11  TLPSQFPPP-----SCLVPTFVCASFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVLDL 65
           TLPSQF PP      C + T VC+ F                              V+DL
Sbjct: 6   TLPSQFSPPFPCRRHCRL-TVVCSPFRRRSRSRRCDNKLSLPTSTSSSFEPKLEA-VIDL 63

Query: 66  THLTPFQVLIPXXXXXXXXXXXXGKDAYRDLQTLFTLDDNRRLVVSCRPSTLHFVGTSAA 125
           T LT FQ                G+DAY            RRLVVSCRPSTLHF+GTSAA
Sbjct: 64  TLLTAFQ-------SKLGRFLSSGRDAY----------HKRRLVVSCRPSTLHFLGTSAA 106

Query: 126 LTFLVLSVFRVLVQLVSGFGSWRRNASTYKPV-VRRDRSLGGKEVVIAWGESQSQSTPAS 184
           LTFL +SVF VL QL+S F SWRRNAS+Y PV VRRDRSL                    
Sbjct: 107 LTFLAVSVFTVLAQLISRFSSWRRNASSYMPVLVRRDRSL------------------EK 148

Query: 185 RVQRTAIAKNKV-RVEKKLPKWWPSVINNAAVVFDVNERDEYKREAYRVVRAIVDNRMGG 243
           R Q    AKNKV R ++  P+WWP+VIN+ A VFD +E++EYK EAYRVVRAI ++R+GG
Sbjct: 149 RHQSIISAKNKVIRFQRIFPRWWPTVINSNASVFDADEQEEYKTEAYRVVRAITNSRLGG 208

Query: 244 RDISEDDIIRL 254
            D  E DII++
Sbjct: 209 NDNMESDIIQM 219


>Glyma16g09290.1 
          Length = 155

 Score =  119 bits (297), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 78/178 (43%), Positives = 97/178 (54%), Gaps = 49/178 (27%)

Query: 62  VLDLTHLTPFQVLIPXXXXXXXXXXXXGKDAYRDLQTLFTLDDNRRLVVSCRPSTLHFVG 121
           V+DLT LT FQ  +              KD YRDLQTL TLD NRR              
Sbjct: 21  VIDLTPLTAFQYEL-------RQFLSSDKDTYRDLQTLVTLDHNRR-------------- 59

Query: 122 TSAALTFLVLSVFRVLVQLVSGFGSWRRNASTYK-PVVRRDRSLGGKEVVIAWGESQSQS 180
                                 F  W  NAS++K  VVRRDRSLGGKEVV+AWG+ +S +
Sbjct: 60  ----------------------FSFWHHNASSHKLVVVRRDRSLGGKEVVVAWGQ-RSDT 96

Query: 181 TPASRVQRTAI---AKNKV-RVEKKLPKWWPSVINNAAVVFDVNERDEYKREAYRVVR 234
            P S + + ++   AKNKV   ++KLPKWWP+VIN+ A +F  NE++EYKREAY VVR
Sbjct: 97  NPLSALVQDSVKHSAKNKVVPFQRKLPKWWPTVINSNASIFYANEQEEYKREAYGVVR 154


>Glyma10g19270.1 
          Length = 144

 Score =  115 bits (287), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 58/78 (74%), Positives = 58/78 (74%)

Query: 291 APTTSTSIDINGEDAQQFLAGFAENIGLENXXXXXXXXXXXXXSTRSRLLQAWALEMQGK 350
           APT STSIDINGEDA QFL GFAENIGLEN              TRS LLQAWALEMQGK
Sbjct: 26  APTHSTSIDINGEDAPQFLTGFAENIGLENVRTATIVSAAIAAHTRSCLLQAWALEMQGK 85

Query: 351 HVDATVELSKICLLLRIF 368
            VDA VELSKICLLLRIF
Sbjct: 86  QVDAMVELSKICLLLRIF 103


>Glyma10g44240.1 
          Length = 59

 Score = 90.9 bits (224), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 44/55 (80%), Positives = 47/55 (85%), Gaps = 5/55 (9%)

Query: 380 VSRGLQKHLKLEQRKHLMFLFGKVCGEDSHRIAREALGLMH-----SDQLEDKMA 429
           VSRGL+KHLK EQR+ LMFLFGKVCGEDSHRIAREALGLMH     SDQLED +A
Sbjct: 4   VSRGLEKHLKPEQREQLMFLFGKVCGEDSHRIAREALGLMHSQNGFSDQLEDNIA 58


>Glyma07g07080.1 
          Length = 78

 Score = 68.2 bits (165), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 51/118 (43%), Positives = 59/118 (50%), Gaps = 46/118 (38%)

Query: 89  GKDAYRDLQTLFTLDDNRRLVVSCRPSTLHFVGTSAALTFLVLSVFRVLVQLVSGFGSWR 148
           GKD YRDLQTL TLD N R                                    F SWR
Sbjct: 5   GKDTYRDLQTLVTLDHNWR------------------------------------FSSWR 28

Query: 149 RNASTYKPVV-RRDRSLGGKEVVIAWGESQSQSTPASRVQRTAIAKNK-VRVEKKLPK 204
           RN S++KPVV RRDRSLGGKEVV+AW   +        V+R+  AKNK V  ++KLPK
Sbjct: 29  RNTSSHKPVVVRRDRSLGGKEVVVAWVPVRDS------VKRS--AKNKVVPFQRKLPK 78