Miyakogusa Predicted Gene

Lj5g3v2290080.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj5g3v2290080.1 Non Chatacterized Hit- tr|I1PAU1|I1PAU1_ORYGL
Uncharacterized protein OS=Oryza glaberrima PE=4
SV=1,23.78,0.000000002,seg,NULL,CUFF.60767.1
         (401 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma10g43940.1                                                       475   e-134
Glyma10g43940.2                                                       434   e-122
Glyma20g38680.1                                                       398   e-111
Glyma03g06680.1                                                       127   3e-29

>Glyma10g43940.1 
          Length = 966

 Score =  475 bits (1223), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 250/394 (63%), Positives = 293/394 (74%), Gaps = 20/394 (5%)

Query: 27  KQKTWDNFSDSGVNN-----------PSPKGLFSKSRKQVSDSQSSCGGPHLXXXXXXXX 75
           KQ  WD+FSD GVNN            SPKG FSKSRK VSD+QSS  GP L        
Sbjct: 28  KQTAWDSFSDIGVNNNRAYGKTEDYFQSPKGFFSKSRKHVSDTQSSSAGPDLRRSRSLSS 87

Query: 76  XXXQFNDPTRSPTSSNIATDPYHQFEHSSRCQALNFEKQRQDKPPQLAASSIQNSNRYER 135
              QF DPTRSP+SS I +DPY Q  HSSR QA N+EK ++DKP Q+A SS+QNS+RYER
Sbjct: 88  SAYQFRDPTRSPSSS-IVSDPYQQVGHSSRSQAPNYEKPKRDKPAQVAVSSVQNSHRYER 146

Query: 136 PGXXXXXXXXXXXXXXXXXXXM------IVDRYIVGEQQPEENRPRSNSQRNNTRHGNHG 189
           PG                          IVDRYI GEQ PEE+RP++NSQR+N+RHGN+G
Sbjct: 147 PGSSSSSRSHHESSGNSSSTCSSNISSKIVDRYIDGEQHPEESRPKNNSQRSNSRHGNYG 206

Query: 190 MKLPPKIQHTAPSSPTNGVKDKPRTHSFREAKGSRLRSSSRDWTENGH--ESPRTLAKSV 247
           +K PPK+Q TAP+SPT+GVKDKPRTHSFREAK +RLR SSRDWTENG   ESPR+LAK+V
Sbjct: 207 VKRPPKVQLTAPNSPTHGVKDKPRTHSFREAKATRLRFSSRDWTENGFGPESPRSLAKNV 266

Query: 248 IQKLSLSCDLSQTSSKNFEVDNPVTIEDIYARSVNGRYDSDLDDALPKSSLLDEPYRMTN 307
           I++LS SCDL +  SKN  +DNP+TIEDIY+RSVNG YDSD DDA  K+ L DEPYRM N
Sbjct: 267 IERLSQSCDLPKPCSKNVNIDNPITIEDIYSRSVNGHYDSDFDDAQAKNDLSDEPYRMAN 326

Query: 308 GFHGMDSNGDGFSCDEPEEDADAELMRRSKEAEERVILLSKILEQENFFPDGGCDVSTLI 367
           G+HGMD N +G SCDEPEEDADAEL+RRSKEAEERVILLSK LE+++FFPD G DVS LI
Sbjct: 327 GYHGMDVNFEGLSCDEPEEDADAELIRRSKEAEERVILLSKKLERDSFFPDDGYDVSALI 386

Query: 368 QTVRNLAEERISLALEVSTNLRYHIADRRSAKEE 401
           +T+R+L EE+ISLALEVST+LR  IADR SA++E
Sbjct: 387 RTIRHLLEEKISLALEVSTHLRSQIADRVSARDE 420


>Glyma10g43940.2 
          Length = 935

 Score =  434 bits (1117), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 233/383 (60%), Positives = 277/383 (72%), Gaps = 29/383 (7%)

Query: 27  KQKTWDNFSDSGVNNPSPKGLFSKSRKQVSDSQSSCGGPHLXXXXXXXXXXXQFNDPTRS 86
           KQ  WD+FSD GVNN            +  D + S                 QF DPTRS
Sbjct: 28  KQTAWDSFSDIGVNN-----------NRAYDLRRS---------RSLSSSAYQFRDPTRS 67

Query: 87  PTSSNIATDPYHQFEHSSRCQALNFEKQRQDKPPQLAASSIQNSNRYERPGXXXXXXXXX 146
           P+SS I +DPY Q  HSSR QA N+EK ++DKP Q+A SS+QNS+RYERPG         
Sbjct: 68  PSSS-IVSDPYQQVGHSSRSQAPNYEKPKRDKPAQVAVSSVQNSHRYERPGSSSSSRSHH 126

Query: 147 XXXXXXXXXXM------IVDRYIVGEQQPEENRPRSNSQRNNTRHGNHGMKLPPKIQHTA 200
                            IVDRYI GEQ PEE+RP++NSQR+N+RHGN+G+K PPK+Q TA
Sbjct: 127 ESSGNSSSTCSSNISSKIVDRYIDGEQHPEESRPKNNSQRSNSRHGNYGVKRPPKVQLTA 186

Query: 201 PSSPTNGVKDKPRTHSFREAKGSRLRSSSRDWTENGH--ESPRTLAKSVIQKLSLSCDLS 258
           P+SPT+GVKDKPRTHSFREAK +RLR SSRDWTENG   ESPR+LAK+VI++LS SCDL 
Sbjct: 187 PNSPTHGVKDKPRTHSFREAKATRLRFSSRDWTENGFGPESPRSLAKNVIERLSQSCDLP 246

Query: 259 QTSSKNFEVDNPVTIEDIYARSVNGRYDSDLDDALPKSSLLDEPYRMTNGFHGMDSNGDG 318
           +  SKN  +DNP+TIEDIY+RSVNG YDSD DDA  K+ L DEPYRM NG+HGMD N +G
Sbjct: 247 KPCSKNVNIDNPITIEDIYSRSVNGHYDSDFDDAQAKNDLSDEPYRMANGYHGMDVNFEG 306

Query: 319 FSCDEPEEDADAELMRRSKEAEERVILLSKILEQENFFPDGGCDVSTLIQTVRNLAEERI 378
            SCDEPEEDADAEL+RRSKEAEERVILLSK LE+++FFPD G DVS LI+T+R+L EE+I
Sbjct: 307 LSCDEPEEDADAELIRRSKEAEERVILLSKKLERDSFFPDDGYDVSALIRTIRHLLEEKI 366

Query: 379 SLALEVSTNLRYHIADRRSAKEE 401
           SLALEVST+LR  IADR SA++E
Sbjct: 367 SLALEVSTHLRSQIADRVSARDE 389


>Glyma20g38680.1 
          Length = 923

 Score =  398 bits (1023), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 230/396 (58%), Positives = 267/396 (67%), Gaps = 52/396 (13%)

Query: 27  KQKTWDNFSDSGVNN-------------PSPKGLFSKSRKQVSDSQSSCGGPHLXXXXXX 73
           KQ  WD+FSD G+NN              SPKG FSKSRK                    
Sbjct: 28  KQAAWDSFSDIGMNNNQAYGKTKSEDYFQSPKGFFSKSRKH------------------- 68

Query: 74  XXXXXQFNDPTRSPTSSNIATDPYHQFEHSS-RCQALNFEKQRQDKPPQLAASSIQNSNR 132
                             I   P  +F   S   QA N+EKQ++DKP Q+A  S+QN +R
Sbjct: 69  ------------KEQVIVIIYLPVQRFNQVSFNSQAPNYEKQKRDKPTQVAVPSVQNLHR 116

Query: 133 YERPGXXXXXXXXXXXXXXXXXXXM-----IVDRYIVGEQQPEENRPRSNSQRNNTRHGN 187
           YERPG                         IVDRYI GEQ PEE RPR+NSQRNN+R GN
Sbjct: 117 YERPGSPSSSRSHHESSGNSSTCSSNISSKIVDRYIDGEQHPEEIRPRNNSQRNNSRQGN 176

Query: 188 HGMKLPPKIQHTAPSSPTNGVKDKPRTHSFREAKGSRLRSSSRDWTENGH--ESPRTLAK 245
           +G+KLPPK+Q TAP+SPT+GVKDKPRTHSFREAK +RL  SSRDWTENG   ESPR+LAK
Sbjct: 177 YGVKLPPKVQLTAPNSPTHGVKDKPRTHSFREAKATRLGFSSRDWTENGFGPESPRSLAK 236

Query: 246 SVIQKLSLSCDLSQTSSKNFEVDNPVTIEDIYARSVNGRYDSDLDDALPKSSLLDEPYRM 305
           +VI++LS SCDL++  SKN  VDNP+TIEDIY+RSVNG YDSD D A PK+ LLDEPYRM
Sbjct: 237 NVIERLSQSCDLAKPCSKNANVDNPITIEDIYSRSVNGHYDSDFDAAQPKNDLLDEPYRM 296

Query: 306 TNGFHGMDSNGDGFSCDEPEEDADAELMRRSKEAEERVILLSKILEQENFFPDGGCDVST 365
           TNG+HGMD N +G SCDE EEDADAELMRRSKEAEERVILLSK LE+++FFPDGG DVS 
Sbjct: 297 TNGYHGMDGNFEGLSCDEAEEDADAELMRRSKEAEERVILLSKKLERDSFFPDGGYDVSA 356

Query: 366 LIQTVRNLAEERISLALEVSTNLRYHIADRRSAKEE 401
           LIQT+R+L EE+ISLALEVST+LR  IA+R SA+EE
Sbjct: 357 LIQTIRHLLEEKISLALEVSTHLRSQIAERVSAREE 392


>Glyma03g06680.1 
          Length = 142

 Score =  127 bits (318), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 60/85 (70%), Positives = 69/85 (81%)

Query: 305 MTNGFHGMDSNGDGFSCDEPEEDADAELMRRSKEAEERVILLSKILEQENFFPDGGCDVS 364
           MTNG+HGMD N +G SCDEPEEDADAELM RSKE EERVIL+SK LE ++FF D G DVS
Sbjct: 1   MTNGYHGMDGNFEGLSCDEPEEDADAELMTRSKEPEERVILVSKKLEPDSFFLDAGYDVS 60

Query: 365 TLIQTVRNLAEERISLALEVSTNLR 389
            LIQT+R+L EE+ISLALE+    R
Sbjct: 61  ALIQTIRHLLEEKISLALEIELEFR 85