Miyakogusa Predicted Gene

Lj5g3v2289000.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj5g3v2289000.1 Non Chatacterized Hit- tr|F6HVQ1|F6HVQ1_VITVI
Putative uncharacterized protein OS=Vitis vinifera GN=,73.63,0,no
description,NIF system FeS cluster assembly, NifU-like scaffold,
N-terminal; Q5WMY1_ORYSA_Q5WMY1;,CUFF.57207.1
         (272 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma20g38630.1                                                       379   e-105
Glyma10g43880.1                                                       128   7e-30
Glyma12g28900.1                                                        62   5e-10
Glyma09g06300.1                                                        62   5e-10
Glyma15g17580.1                                                        62   6e-10
Glyma12g28900.2                                                        58   1e-08

>Glyma20g38630.1 
          Length = 267

 Score =  379 bits (974), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 181/207 (87%), Positives = 195/207 (94%)

Query: 66  GQRRTMFIQTQSTPNPLSLMFHPGKPVMEVGSADFPNPRSAMNSPLAKSLFAIDGITRIF 125
           GQRR+MFIQTQ TPNP SLMF+PGKPVMEVGS+DFPNPRSAMNSPLAKSLFAIDG+TR+F
Sbjct: 61  GQRRSMFIQTQPTPNPSSLMFYPGKPVMEVGSSDFPNPRSAMNSPLAKSLFAIDGVTRVF 120

Query: 126 FGSDFVTVTKSEDASWEFLKPEIFAAIMDFYSSGQPLFLDSQTSAAMDTAIKDDDSEIVA 185
           FGSDFVTVTKSE+A+WEFLKPE+FAAIMDFYSS QPLFLDSQ +AAMDTAI  DDSE VA
Sbjct: 121 FGSDFVTVTKSEEAAWEFLKPEVFAAIMDFYSSAQPLFLDSQAAAAMDTAIHQDDSETVA 180

Query: 186 MIKELLETRIRPAVQDDGGDIVYRGFDPDTGIVKLQMQGACSGCPSSSVTLKSGIENMLM 245
           MIKELLETRIRPAVQDDGGDI YRGFD DTGIVKL+MQGACSGCPSSSVTLKSGIENMLM
Sbjct: 181 MIKELLETRIRPAVQDDGGDIEYRGFDLDTGIVKLRMQGACSGCPSSSVTLKSGIENMLM 240

Query: 246 HYVPEVKGVEQELDPEGEEAALSGQME 272
           HYVPEVKGVEQELD E + AALSG+++
Sbjct: 241 HYVPEVKGVEQELDAEDDGAALSGEIK 267


>Glyma10g43880.1 
          Length = 139

 Score =  128 bits (321), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 70/113 (61%), Positives = 75/113 (66%), Gaps = 7/113 (6%)

Query: 160 QPLFLDSQTSAAMDTAIKDDDSEIVAMIKELLETRIRPAVQDDGGDIVYRGFDPDTGIVK 219
            PL    Q           DDSE VAMIKELLETRIRPAVQDDGGDI YRGFDPDTGIVK
Sbjct: 34  HPLCKMIQVPCVYLCLTHGDDSETVAMIKELLETRIRPAVQDDGGDIEYRGFDPDTGIVK 93

Query: 220 LQMQGACSGCPSSSVTLKSGIENMLMHYVPEVKGVEQELDPEGEEAALSGQME 272
           L+MQGACSGCP   +            Y+  VKGVEQELD E + AALSGQM+
Sbjct: 94  LRMQGACSGCPMYYLF-------EFNRYLLLVKGVEQELDAEDDGAALSGQMK 139


>Glyma12g28900.1 
          Length = 219

 Score = 62.4 bits (150), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 30/67 (44%), Positives = 41/67 (61%), Gaps = 2/67 (2%)

Query: 195 IRPAVQDDGGDIVYRGFDPDTGIVKLQMQGACSGCPSSSVTLKSGIENMLMHYVPEVKGV 254
           IRP +  DGG++     D +  +V+L++QGAC  CPSS  T+K GIE  LM  +PE+  V
Sbjct: 81  IRPYLIADGGNVALHQIDGN--VVRLKLQGACGSCPSSVTTMKMGIERRLMEKIPEIVAV 138

Query: 255 EQELDPE 261
           E   D E
Sbjct: 139 EPIADEE 145


>Glyma09g06300.1 
          Length = 235

 Score = 62.4 bits (150), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 30/67 (44%), Positives = 43/67 (64%), Gaps = 2/67 (2%)

Query: 195 IRPAVQDDGGDIVYRGFDPDTGIVKLQMQGACSGCPSSSVTLKSGIENMLMHYVPEVKGV 254
           +RP +  DGG++     + D  +V L++QGAC  CPSS++TLK GIE  L   +PE+  V
Sbjct: 96  VRPGLMADGGNVAL--HEIDGLVVVLKLQGACGSCPSSAMTLKMGIETRLRDKIPEILEV 153

Query: 255 EQELDPE 261
           EQ +D E
Sbjct: 154 EQIMDTE 160


>Glyma15g17580.1 
          Length = 236

 Score = 62.0 bits (149), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 30/67 (44%), Positives = 43/67 (64%), Gaps = 2/67 (2%)

Query: 195 IRPAVQDDGGDIVYRGFDPDTGIVKLQMQGACSGCPSSSVTLKSGIENMLMHYVPEVKGV 254
           +RP +  DGG++     + D  +V L++QGAC  CPSS++TLK GIE  L   +PE+  V
Sbjct: 97  VRPGLMADGGNVALH--EIDGLVVVLKLQGACGSCPSSAMTLKMGIETRLRDKIPEILEV 154

Query: 255 EQELDPE 261
           EQ +D E
Sbjct: 155 EQIMDTE 161


>Glyma12g28900.2 
          Length = 185

 Score = 57.8 bits (138), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 27/60 (45%), Positives = 37/60 (61%), Gaps = 2/60 (3%)

Query: 202 DGGDIVYRGFDPDTGIVKLQMQGACSGCPSSSVTLKSGIENMLMHYVPEVKGVEQELDPE 261
           DGG++     D +  +V+L++QGAC  CPSS  T+K GIE  LM  +PE+  VE   D E
Sbjct: 54  DGGNVALHQIDGN--VVRLKLQGACGSCPSSVTTMKMGIERRLMEKIPEIVAVEPIADEE 111