Miyakogusa Predicted Gene
- Lj5g3v2258310.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj5g3v2258310.1 Non Chatacterized Hit- tr|D8T3L0|D8T3L0_SELML
Putative uncharacterized protein OS=Selaginella
moelle,24.13,0.0000000007,PPR,Pentatricopeptide repeat; PPR:
pentatricopeptide repeat domain,Pentatricopeptide repeat; Small
M,CUFF.57078.1
(461 letters)
Database: Glyma1.pep
75,778 sequences; 25,431,882 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Glyma20g23950.1 551 e-157
Glyma08g28990.1 147 2e-35
Glyma01g39730.1 142 8e-34
Glyma04g11280.1 120 4e-27
Glyma08g41290.1 71 2e-12
Glyma11g01570.1 65 2e-10
Glyma08g40580.1 57 3e-08
Glyma07g20580.1 57 4e-08
Glyma18g16860.1 56 1e-07
Glyma17g10790.1 55 2e-07
Glyma01g02030.1 55 2e-07
Glyma20g24390.1 52 1e-06
Glyma11g00310.1 51 3e-06
Glyma04g02090.1 50 4e-06
Glyma11g36740.1 50 5e-06
Glyma04g01980.2 50 5e-06
Glyma04g01980.1 50 6e-06
>Glyma20g23950.1
Length = 425
Score = 551 bits (1421), Expect = e-157, Method: Compositional matrix adjust.
Identities = 268/424 (63%), Positives = 320/424 (75%), Gaps = 11/424 (2%)
Query: 42 CTLTKQGQRFLTKLAXXXXXXDHLIRKFVAGSPKSVVXXXXXXXXXXXXXXXXXXXXXXX 101
CTLTKQGQRFLTKL D+LIR+F+ SPKSVV
Sbjct: 2 CTLTKQGQRFLTKLTTSSATADNLIRRFLLASPKSVVLSTLSHLLSPSTSYPHLSSLASQ 61
Query: 102 XXXRISEAPWFTWNPSIVAHLAALLHQNEHHEKAETLVSEANSKLESRQRELVVFHGKLL 161
IS+APWF+WNP+ VA LAALLH HH ++E+L+S+A+S+L+SRQR+LV+F+GKL+
Sbjct: 62 LYTGISQAPWFSWNPTTVAELAALLHSLGHHAQSESLISDASSRLQSRQRDLVLFYGKLI 121
Query: 162 ESHSKRGSETGFDAAYCYLNQLVRFSSSVYVKRRAYEYMVSGLCAMDRPREAEDLVQDLR 221
+SHSKR S T FDAA+ YL+ LVR SSS++VKRRAY+YMVSGLC MDRPREAEDLV
Sbjct: 122 DSHSKRNSHTAFDAAFGYLHNLVRTSSSLHVKRRAYQYMVSGLCLMDRPREAEDLVL--- 178
Query: 222 ENGGLQPTAFEFKSILYGYGRLGLFQDLNRVVEQMEKSGFAIDTVCSNMVLSTYGIHGEH 281
GLQP+ FE+KSI+YGYGRLGLF D+NRVV++ME++GFA+DTVC NMVLSTYGIHGEH
Sbjct: 179 ---GLQPSGFEYKSIVYGYGRLGLFNDMNRVVDEMERNGFAVDTVCYNMVLSTYGIHGEH 235
Query: 282 VEMVSWLRSMRNSGVPFSIRTYNSVSNSCPTIMRKMVGFKDLAL-SVXXXXXXXXXXXAM 340
VEMV WLR M NSGVPFS+RTYNSVSNSCP+I R LAL S+ M
Sbjct: 236 VEMVRWLRRMSNSGVPFSVRTYNSVSNSCPSITRMTRDLSKLALLSISELKEGLEGGEGM 295
Query: 341 VVKELL---ECSRILEEVMVWDSLETKLDLHGFHLGSSYLIMLLWLEEMHRRLDDSSYGI 397
VV+ELL C ILEEVMVWDS E KLDLHGFHL S+YLI+LLWLEEM RRL+DS+YG+
Sbjct: 296 VVRELLLLGSCG-ILEEVMVWDSSEVKLDLHGFHLASAYLIVLLWLEEMGRRLNDSNYGV 354
Query: 398 PAEITVVCGSGRHSNVRGESPVKALVKEMMIKMRGPLRIDRKNNGCFIAKGKVVKTWLCE 457
PAE TVVCG G+HS+VRGESPV+ LV++MM+KM PL++DRKNNGCFIAKGK VK WL +
Sbjct: 355 PAEFTVVCGLGKHSSVRGESPVRVLVQKMMVKMGSPLKVDRKNNGCFIAKGKAVKNWLSQ 414
Query: 458 MRKS 461
+
Sbjct: 415 FNNN 418
>Glyma08g28990.1
Length = 140
Score = 147 bits (372), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 69/111 (62%), Positives = 88/111 (79%)
Query: 106 ISEAPWFTWNPSIVAHLAALLHQNEHHEKAETLVSEANSKLESRQRELVVFHGKLLESHS 165
IS+APWFTWN + A L ALLH H ++E+L+ +A+SKL+ Q +LV+F+GKL++SHS
Sbjct: 30 ISQAPWFTWNSTTAAELTALLHSLGRHSQSESLIFDASSKLQPCQCDLVLFYGKLIDSHS 89
Query: 166 KRGSETGFDAAYCYLNQLVRFSSSVYVKRRAYEYMVSGLCAMDRPREAEDL 216
KR S T FDAA+ YL+ LVR SSS++VKR AY+YMVSGLC MDRP EAEDL
Sbjct: 90 KRNSHTAFDAAFGYLHNLVRTSSSLHVKRMAYQYMVSGLCLMDRPYEAEDL 140
>Glyma01g39730.1
Length = 110
Score = 142 bits (358), Expect = 8e-34, Method: Composition-based stats.
Identities = 64/105 (60%), Positives = 86/105 (81%)
Query: 106 ISEAPWFTWNPSIVAHLAALLHQNEHHEKAETLVSEANSKLESRQRELVVFHGKLLESHS 165
IS+APWFTWNP+ VA LAALLH +HH ++E+L+S+A+S+L+ RQ +LV+F+GKL++SHS
Sbjct: 5 ISQAPWFTWNPTTVAKLAALLHSLDHHSQSESLISDASSRLQPRQCDLVLFYGKLIDSHS 64
Query: 166 KRGSETGFDAAYCYLNQLVRFSSSVYVKRRAYEYMVSGLCAMDRP 210
K+ S F+AA+ YL LV SSS++VKR Y+YMVSGLC MDRP
Sbjct: 65 KQNSHIAFNAAFGYLYNLVCTSSSLHVKRMTYQYMVSGLCLMDRP 109
>Glyma04g11280.1
Length = 99
Score = 120 bits (300), Expect = 4e-27, Method: Composition-based stats.
Identities = 54/95 (56%), Positives = 72/95 (75%)
Query: 106 ISEAPWFTWNPSIVAHLAALLHQNEHHEKAETLVSEANSKLESRQRELVVFHGKLLESHS 165
I++APWFTWNP+ VA L ALLH HH + E+L+S +S+L+ Q +LV F+ KL++ HS
Sbjct: 5 ITQAPWFTWNPTTVAELVALLHNFSHHSQFESLISNTSSRLQPCQCDLVFFYNKLIDPHS 64
Query: 166 KRGSETGFDAAYCYLNQLVRFSSSVYVKRRAYEYM 200
KR S T FDAA+ YL+ LVR SSS++VKR AY+YM
Sbjct: 65 KRNSHTAFDAAFGYLHNLVRTSSSLHVKRMAYQYM 99
>Glyma08g41290.1
Length = 136
Score = 71.2 bits (173), Expect = 2e-12, Method: Composition-based stats.
Identities = 31/43 (72%), Positives = 38/43 (88%)
Query: 174 DAAYCYLNQLVRFSSSVYVKRRAYEYMVSGLCAMDRPREAEDL 216
+AA+ YL+ LVR SSS++VKR+AY+YMVSGLC MDRPRE EDL
Sbjct: 94 NAAFGYLHNLVRTSSSLHVKRKAYQYMVSGLCLMDRPREVEDL 136
>Glyma11g01570.1
Length = 1398
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 39/116 (33%), Positives = 61/116 (52%), Gaps = 5/116 (4%)
Query: 196 AYEYMVS--GLCAMDRPREAEDLVQDLRENGGLQPTAFEFKSILYGYGRLGLFQDLNRVV 253
Y M+S G CA R R+AE+L ++L E+ G P A + S+LY + R G + + +
Sbjct: 306 TYNAMISVYGRCA--RARKAEELFKEL-ESKGFFPDAVTYNSLLYAFSREGNTEKVRDIC 362
Query: 254 EQMEKSGFAIDTVCSNMVLSTYGIHGEHVEMVSWLRSMRNSGVPFSIRTYNSVSNS 309
E+M K GF D + N ++ YG G H + + R M++SG TY + +S
Sbjct: 363 EEMVKRGFGQDEMTYNTIIHMYGKQGRHDQAMQIYRDMKSSGRNPDAVTYTVLIDS 418
Score = 49.3 bits (116), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 25/116 (21%), Positives = 58/116 (50%), Gaps = 1/116 (0%)
Query: 187 SSSVYVKRRAYEYMVSGLCAMDRPREAEDLVQDLRENGGLQPTAFEFKSILYGYGRLGLF 246
+S+ Y ++ C RP E L+ +R + GL+P ++S++ + + ++
Sbjct: 925 DASLKPDEETYNTLIIMYCRDRRPEEGFSLMNKMR-SLGLEPKLDTYRSLITAFNKQRMY 983
Query: 247 QDLNRVVEQMEKSGFAIDTVCSNMVLSTYGIHGEHVEMVSWLRSMRNSGVPFSIRT 302
+ + E++ +G+ +D ++++ TY G+H + + L M+ SG+ +I T
Sbjct: 984 EQAEELFEELRSNGYKLDRAFYHLMMKTYRTSGDHRKAENLLAIMKESGIEPTIST 1039
>Glyma08g40580.1
Length = 551
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 40/155 (25%), Positives = 74/155 (47%), Gaps = 6/155 (3%)
Query: 155 VFHGKLLESHSKRGSETGFDAAYCYLNQLVRFSSSVYVKRRAYEYMVSGLCAMDRPREAE 214
V + L++ + K G A+ NQ+V + V Y +V GLC A
Sbjct: 249 VTYTALIDGYCKAGE---MKEAFSLHNQMVEKGLTPNV--VTYTALVDGLCKCGEVDIAN 303
Query: 215 DLVQDLRENGGLQPTAFEFKSILYGYGRLGLFQDLNRVVEQMEKSGFAIDTVCSNMVLST 274
+L+ ++ E G LQP + +++ G ++G + +++E+M+ +GF DT+ ++
Sbjct: 304 ELLHEMSEKG-LQPNVCTYNALINGLCKVGNIEQAVKLMEEMDLAGFFPDTITYTTIMDA 362
Query: 275 YGIHGEHVEMVSWLRSMRNSGVPFSIRTYNSVSNS 309
Y GE + LR M + G+ +I T+N + N
Sbjct: 363 YCKMGEMAKAHELLRIMLDKGLQPTIVTFNVLMNG 397
>Glyma07g20580.1
Length = 577
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 32/116 (27%), Positives = 55/116 (47%), Gaps = 1/116 (0%)
Query: 191 YVKRRAYEYMVSGLCAMDRPREAEDLVQDLRENGGLQPTAFEFKSILYGYGRLGLFQDLN 250
+ R Y ++ GLC M R EA L ++ + G QP + + +++GY ++G +
Sbjct: 315 FPDRVMYTTVIKGLCEMQRLGEARKLWFEMIKKG-FQPNEYTYNVMMHGYCKIGDLAEAR 373
Query: 251 RVVEQMEKSGFAIDTVCSNMVLSTYGIHGEHVEMVSWLRSMRNSGVPFSIRTYNSV 306
++ E M G+A TV ++S +HG E S M G+ + TYN +
Sbjct: 374 KIFEDMRDRGYAETTVSYGTMISGLCLHGRTDEAQSLFEEMFQKGIVPDLITYNCL 429
>Glyma18g16860.1
Length = 381
Score = 55.8 bits (133), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/114 (27%), Positives = 58/114 (50%), Gaps = 1/114 (0%)
Query: 196 AYEYMVSGLCAMDRPREAEDLVQDLRENGGLQPTAFEFKSILYGYGRLGLFQDLNRVVEQ 255
Y +V GLC A +L+ ++ E G LQP + +++ G ++G + +++E+
Sbjct: 248 TYTALVDGLCKRGEVDIANELLHEMSEKG-LQPNVCTYNALINGLCKVGNIEQAVKLMEE 306
Query: 256 MEKSGFAIDTVCSNMVLSTYGIHGEHVEMVSWLRSMRNSGVPFSIRTYNSVSNS 309
M+ +GF DT+ ++ Y GE + LR M + G+ +I T+N + N
Sbjct: 307 MDLAGFYPDTITYTTLMDAYCKMGEMAKAHELLRIMLDKGLQPTIVTFNVLMNG 360
>Glyma17g10790.1
Length = 748
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/113 (30%), Positives = 58/113 (51%), Gaps = 5/113 (4%)
Query: 196 AYEYMVSGLCAMDRPREAEDLVQDLRENGGLQPTAFEFKSILYGYGRLGLFQDLNRVVEQ 255
Y ++ GLC R EAE+ ++ + NGG +P + SI+ GY + G+ QD NRV++
Sbjct: 263 TYNILICGLCRNSRVVEAEEYLRKMV-NGGFEPDDLTYNSIIDGYCKKGMVQDANRVLKD 321
Query: 256 MEKSGFAID--TVCSNMVLSTYGIHGEHVEMVSWLRSMRNSGVPFSIRTYNSV 306
GF D T CS +++ + G+ ++ + G+ SI YN++
Sbjct: 322 AVFKGFKPDEFTYCS--LINGFCKDGDPDRAMAVFKDGLGKGLRPSIVLYNTL 372
>Glyma01g02030.1
Length = 734
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/120 (28%), Positives = 55/120 (45%), Gaps = 1/120 (0%)
Query: 187 SSSVYVKRRAYEYMVSGLCAMDRPREAEDLVQDLRENGGLQPTAFEFKSILYGYGRLGLF 246
+SS YE ++ G C A L++++ N L PTAF +S++ GY +LGLF
Sbjct: 396 ASSCKYDSTVYETLIDGFCMQGDMDSAIKLLEEMICNE-LVPTAFSCRSLIRGYYKLGLF 454
Query: 247 QDLNRVVEQMEKSGFAIDTVCSNMVLSTYGIHGEHVEMVSWLRSMRNSGVPFSIRTYNSV 306
V M + G DT+ N +L G E ++ L + G + +YN++
Sbjct: 455 DQALEVFNAMLRDGIWPDTIACNYILDGSCRAGYFKEALTLLEDFQEHGFNLNPHSYNAI 514
>Glyma20g24390.1
Length = 524
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/176 (25%), Positives = 74/176 (42%), Gaps = 9/176 (5%)
Query: 133 EKAETLVSEANSKLESRQRELVVFHGKLLESHSKRGSETGFDAAYCYLNQLVRFSSSVYV 192
EKAE + + E+ V + L+E++S+ G G + + +
Sbjct: 292 EKAEEVFEQMQ---EAGLEPDVYAYNALMEAYSRAGYPYGAAEIFSLMQHM-----GCEP 343
Query: 193 KRRAYEYMVSGLCAMDRPREAEDLVQDLRENGGLQPTAFEFKSILYGYGRLGLFQDLNRV 252
R +Y +V +AE + +D++ G + PT +L Y ++G +
Sbjct: 344 DRASYNILVDAYGKAGFQDDAEAVFKDMKRVG-ITPTMKSHMVLLSAYSKMGSVNKCEEI 402
Query: 253 VEQMEKSGFAIDTVCSNMVLSTYGIHGEHVEMVSWLRSMRNSGVPFSIRTYNSVSN 308
+ QM KSG +DT N +L+ YG G+ +M LR M I TYN + N
Sbjct: 403 LNQMCKSGLKLDTYVLNSMLNLYGRLGQFGKMEEVLRVMEKGSYVADISTYNILIN 458
>Glyma11g00310.1
Length = 804
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 24/96 (25%), Positives = 50/96 (52%), Gaps = 1/96 (1%)
Query: 211 REAEDLVQDLRENGGLQPTAFEFKSILYGYGRLGLFQDLNRVVEQMEKSGFAIDTVCSNM 270
+++E++++++ E G ++P + +++Y Y R G ++ +R+ +M+ S D V N
Sbjct: 666 QKSEEILREVLEKG-MKPDRISYNTVIYAYCRNGRMKEASRIFSEMKDSALVPDVVTYNT 724
Query: 271 VLSTYGIHGEHVEMVSWLRSMRNSGVPFSIRTYNSV 306
++TY E + +R M G TYNS+
Sbjct: 725 FIATYAADSMFAEAIDVVRYMIKQGCKPDQNTYNSI 760
>Glyma04g02090.1
Length = 563
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 33/135 (24%), Positives = 61/135 (45%), Gaps = 2/135 (1%)
Query: 174 DAAYCYLNQLVRFSSSVYVKRRAYEYMVSGLCAMDRPREAEDLVQDLRENGGLQPTAFEF 233
D A+ LN L F V Y ++ GLC ++ A L++++ NG P +
Sbjct: 193 DEAFRLLNDLRSFGCLPDVI--TYNTLIHGLCRINEVDRARSLLKEVCLNGEFAPDVVSY 250
Query: 234 KSILYGYGRLGLFQDLNRVVEQMEKSGFAIDTVCSNMVLSTYGIHGEHVEMVSWLRSMRN 293
+I+ GY + ++ N + +M +SG A +T N ++ +G G+ ++ M
Sbjct: 251 TTIISGYCKFSKMEEGNLLFGEMIRSGTAPNTFTFNALIGGFGKLGDMASALALYEKMLV 310
Query: 294 SGVPFSIRTYNSVSN 308
G + T+ S+ N
Sbjct: 311 QGCVPDVATFTSLIN 325
>Glyma11g36740.1
Length = 506
Score = 50.1 bits (118), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 28/108 (25%), Positives = 55/108 (50%), Gaps = 1/108 (0%)
Query: 197 YEYMVSGLCAMDRPREAEDLVQDLRENGGLQPTAFEFKSILYGYGRLGLFQDLNRVVEQM 256
Y ++ LC + ++A +QD++ G ++P+ + I++G R G F D R +++M
Sbjct: 138 YNKIIGLLCEGGKMKDALSALQDMKVQG-IKPSLDTYNPIIHGLSREGKFSDALRFIDEM 196
Query: 257 EKSGFAIDTVCSNMVLSTYGIHGEHVEMVSWLRSMRNSGVPFSIRTYN 304
++SG +D+ + ++ YG + EM ++ M G TYN
Sbjct: 197 KESGLELDSETYDGLIGAYGKFQMYDEMGECVKKMELEGCSPDPITYN 244
>Glyma04g01980.2
Length = 680
Score = 50.1 bits (118), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 45/88 (51%), Gaps = 1/88 (1%)
Query: 209 RPREAEDLVQDLRENGGLQPTAFEFKSILYGYGRLGLFQDLNRVVEQMEKSGFAIDTVCS 268
R EAE L +++RENG L+P + ++L GY R G +D VV +MEK+G D
Sbjct: 291 RTHEAEALFEEIRENG-LEPRTRAYNALLKGYVRTGSLKDAEFVVSEMEKAGVKPDEQTY 349
Query: 269 NMVLSTYGIHGEHVEMVSWLRSMRNSGV 296
++++ Y G L+ M S V
Sbjct: 350 SLLIDVYAHAGRWESARIVLKEMEASNV 377
>Glyma04g01980.1
Length = 682
Score = 50.1 bits (118), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 45/88 (51%), Gaps = 1/88 (1%)
Query: 209 RPREAEDLVQDLRENGGLQPTAFEFKSILYGYGRLGLFQDLNRVVEQMEKSGFAIDTVCS 268
R EAE L +++RENG L+P + ++L GY R G +D VV +MEK+G D
Sbjct: 291 RTHEAEALFEEIRENG-LEPRTRAYNALLKGYVRTGSLKDAEFVVSEMEKAGVKPDEQTY 349
Query: 269 NMVLSTYGIHGEHVEMVSWLRSMRNSGV 296
++++ Y G L+ M S V
Sbjct: 350 SLLIDVYAHAGRWESARIVLKEMEASNV 377