Miyakogusa Predicted Gene
- Lj5g3v2243530.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj5g3v2243530.1 Non Chatacterized Hit- tr|A5C7K8|A5C7K8_VITVI
Putative uncharacterized protein OS=Vitis vinifera
GN=,49.36,2e-30,SKP1,SKP1 component; Skp1,SKP1 component,
dimerisation; Skp1_POZ,SKP1 component, POZ; no
description,gene.g63340.t1.1
(156 letters)
Database: Glyma1.pep
75,778 sequences; 25,431,882 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Glyma11g08440.1 128 3e-30
Glyma01g36850.2 126 9e-30
Glyma02g05120.1 121 4e-28
Glyma16g23230.1 118 2e-27
Glyma01g36850.1 113 7e-26
Glyma15g41490.1 62 2e-10
Glyma07g07600.1 61 6e-10
Glyma18g46780.1 61 6e-10
Glyma09g25090.1 60 7e-10
Glyma16g30080.1 60 9e-10
Glyma16g30080.2 60 9e-10
Glyma09g39480.1 59 2e-09
Glyma03g01090.2 59 2e-09
Glyma03g01090.1 59 2e-09
Glyma04g16940.1 51 6e-07
Glyma11g13370.1 50 9e-07
Glyma15g25090.1 50 1e-06
Glyma14g40030.1 48 5e-06
>Glyma11g08440.1
Length = 155
Score = 128 bits (321), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 68/140 (48%), Positives = 93/140 (66%), Gaps = 7/140 (5%)
Query: 4 SSSTKVILMCYGGEVMEVHEALVNASPTLKSLIREKGVDGDNKINLPNISIETMCKINEY 63
SS+ K+ L GE EV EA+ S T+K +I + D+ I LPN++ + + K+ EY
Sbjct: 2 SSAKKITLKSSDGEAFEVEEAVALESQTIKHMIEDDC--ADSGIPLPNVTSKILAKVIEY 59
Query: 64 VKKHAEAVDPAK-----NLDAWDEEFIKVGLDTLYDLLQASCYLKIQNLNDLGCKTVANI 118
KKH EA +P +L AWD EF+KV TL+DL+ A+ YL I++L DL C+TVA++
Sbjct: 60 CKKHVEAANPEDKPSEDDLKAWDAEFVKVDQATLFDLILAANYLNIKSLLDLTCQTVADM 119
Query: 119 IAGKTPEQIRQTFNIKNDFT 138
I GKTPE+IR+TFNIKNDFT
Sbjct: 120 IKGKTPEEIRKTFNIKNDFT 139
>Glyma01g36850.2
Length = 155
Score = 126 bits (316), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 67/140 (47%), Positives = 93/140 (66%), Gaps = 7/140 (5%)
Query: 4 SSSTKVILMCYGGEVMEVHEALVNASPTLKSLIREKGVDGDNKINLPNISIETMCKINEY 63
SS+ K+ L GE EV EA+ S T+K +I + D+ I LPN++ + + K+ EY
Sbjct: 2 SSAKKITLKSSDGEAFEVDEAVALESQTIKHMIEDDC--ADSGIPLPNVTSKILAKVIEY 59
Query: 64 VKKHAEAVDPAK-----NLDAWDEEFIKVGLDTLYDLLQASCYLKIQNLNDLGCKTVANI 118
KKH EA +P +L AWD +F+KV TL+DL+ A+ YL I++L DL C+TVA++
Sbjct: 60 CKKHVEAANPEDKPSEDDLKAWDADFVKVDQATLFDLILAANYLNIKSLLDLTCQTVADM 119
Query: 119 IAGKTPEQIRQTFNIKNDFT 138
I GKTPE+IR+TFNIKNDFT
Sbjct: 120 IKGKTPEEIRKTFNIKNDFT 139
>Glyma02g05120.1
Length = 155
Score = 121 bits (303), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 66/140 (47%), Positives = 94/140 (67%), Gaps = 7/140 (5%)
Query: 4 SSSTKVILMCYGGEVMEVHEALVNASPTLKSLIREKGVDGDNKINLPNISIETMCKINEY 63
+S+ K+ L GE EV EA+ S T+K +I + D+ I LPN++ + + K+ EY
Sbjct: 2 ASTKKITLKSSDGEAFEVEEAVAVESQTIKHMIEDNC--ADSGIPLPNVTSKILAKVIEY 59
Query: 64 VKKHAEA----VDPAKN-LDAWDEEFIKVGLDTLYDLLQASCYLKIQNLNDLGCKTVANI 118
KKH EA P+++ L AWD +F+KV TL+DL+ A+ YL I++L DL C+TVA++
Sbjct: 60 CKKHVEANCADEKPSEDELKAWDADFVKVDQATLFDLILAANYLNIKSLLDLTCQTVADM 119
Query: 119 IAGKTPEQIRQTFNIKNDFT 138
I GKTPE+IR+TFNIKNDFT
Sbjct: 120 IKGKTPEEIRKTFNIKNDFT 139
>Glyma16g23230.1
Length = 155
Score = 118 bits (296), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 65/140 (46%), Positives = 93/140 (66%), Gaps = 7/140 (5%)
Query: 4 SSSTKVILMCYGGEVMEVHEALVNASPTLKSLIREKGVDGDNKINLPNISIETMCKINEY 63
+S+ K+ L GE EV EA+ S T+K +I + D+ I LPN++ + + K+ EY
Sbjct: 2 ASTKKITLKSSDGEAFEVEEAVALESQTIKHMIEDDC--ADSGIPLPNVTSKILAKVIEY 59
Query: 64 VKKHAEA----VDPAKN-LDAWDEEFIKVGLDTLYDLLQASCYLKIQNLNDLGCKTVANI 118
KKH EA P+++ L AWD +F+ V TL+DL+ A+ YL I++L DL C+TVA++
Sbjct: 60 CKKHVEANSADEKPSEDVLKAWDVDFVNVDQATLFDLILAANYLNIKSLLDLTCQTVADM 119
Query: 119 IAGKTPEQIRQTFNIKNDFT 138
I GKTPE+IR+TFNIKNDFT
Sbjct: 120 IKGKTPEEIRKTFNIKNDFT 139
>Glyma01g36850.1
Length = 179
Score = 113 bits (283), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 67/164 (40%), Positives = 93/164 (56%), Gaps = 31/164 (18%)
Query: 4 SSSTKVILMCYGGEVMEVHEALVNASPTLKSLIREKGVDGDNKINLPNISIETMCKINEY 63
SS+ K+ L GE EV EA+ S T+K +I + D+ I LPN++ + + K+ EY
Sbjct: 2 SSAKKITLKSSDGEAFEVDEAVALESQTIKHMIEDDC--ADSGIPLPNVTSKILAKVIEY 59
Query: 64 VKKHAEAVDPAK-----NLDAWDEEFIKVGLDTLYDLL---------------------- 96
KKH EA +P +L AWD +F+KV TL+DL+
Sbjct: 60 CKKHVEAANPEDKPSEDDLKAWDADFVKVDQATLFDLILVQHLHDIQFHCSTLLFSLCLF 119
Query: 97 --QASCYLKIQNLNDLGCKTVANIIAGKTPEQIRQTFNIKNDFT 138
A+ YL I++L DL C+TVA++I GKTPE+IR+TFNIKNDFT
Sbjct: 120 SSSAANYLNIKSLLDLTCQTVADMIKGKTPEEIRKTFNIKNDFT 163
>Glyma15g41490.1
Length = 107
Score = 62.4 bits (150), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 35/109 (32%), Positives = 63/109 (57%), Gaps = 13/109 (11%)
Query: 31 TLKSLIREKGVDGDNKINLPNISIETMCKINEYVKKHAEAVDPAKNLDAWDEEFIK-VGL 89
T+++ I + + I LPN++ T+ +I E+ + +DEEF+K +G+
Sbjct: 3 TIQTFIEDNNNETSIPIPLPNVTSNTLRRILEFKAR------------GFDEEFVKTLGM 50
Query: 90 DTLYDLLQASCYLKIQNLNDLGCKTVANIIAGKTPEQIRQTFNIKNDFT 138
D +++L+ A+ YL ++ L D+ K +A+ I K+ E +R+ FNI NDFT
Sbjct: 51 DEVFELILAANYLNMKTLLDILTKIIADFIKNKSVEFVRKFFNIVNDFT 99
>Glyma07g07600.1
Length = 351
Score = 60.8 bits (146), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 41/134 (30%), Positives = 71/134 (52%), Gaps = 5/134 (3%)
Query: 9 VILMCYGGEVMEVHEALVNASPTLKSLIREKGVDGDNK---INLPN-ISIETMCKINEYV 64
V L + +V + + SP + I +KG+ G +K I LP +S + I +Y
Sbjct: 18 VWLQTSDDSIQQVEQEIAMFSPLICQEIIQKGM-GSSKNCAICLPQQVSPAMLSLILDYC 76
Query: 65 KKHAEAVDPAKNLDAWDEEFIKVGLDTLYDLLQASCYLKIQNLNDLGCKTVANIIAGKTP 124
+ H K ++DE+F+++ + L +L A+ L+++ L DL + +A II GKTP
Sbjct: 77 RFHQVPGRSNKERKSYDEKFVRIDTERLCELTSAADSLQLKPLVDLTSRALARIIEGKTP 136
Query: 125 EQIRQTFNIKNDFT 138
E+IR F++ +D T
Sbjct: 137 EEIRDIFHLPDDLT 150
>Glyma18g46780.1
Length = 320
Score = 60.8 bits (146), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 40/127 (31%), Positives = 70/127 (55%), Gaps = 5/127 (3%)
Query: 16 GEVMEVHEALVNASPTLKSLIREKGVDGDNK---INLPN-ISIETMCKINEYVKKHAEAV 71
G + +V + + P + I +KG+ G +K I LP +S T+ I +Y + H
Sbjct: 25 GSIQQVEQEIAMYCPLICQEIIQKGM-GSSKSCAICLPQRVSPVTLSLILDYCRFHQVPG 83
Query: 72 DPAKNLDAWDEEFIKVGLDTLYDLLQASCYLKIQNLNDLGCKTVANIIAGKTPEQIRQTF 131
K ++DE+FI++ L +L A+ L+++ L DL + +A II GK+PE+IR+ F
Sbjct: 84 RSNKERKSYDEKFIRMDTKRLCELTSAADSLQLKPLVDLTSRALARIIEGKSPEEIREIF 143
Query: 132 NIKNDFT 138
++ +D T
Sbjct: 144 HLPDDLT 150
>Glyma09g25090.1
Length = 366
Score = 60.5 bits (145), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 40/134 (29%), Positives = 71/134 (52%), Gaps = 5/134 (3%)
Query: 9 VILMCYGGEVMEVHEALVNASPTLKSLIREKGVDGDNK---INLPN-ISIETMCKINEYV 64
+ L G + +V E + P + + + G+ G +K I+LP ++ + I +Y
Sbjct: 17 IWLQTVDGSIQQVEEEVAMFCPMICQEVLQTGL-GSSKTYAISLPQRVNPAMLGLILDYC 75
Query: 65 KKHAEAVDPAKNLDAWDEEFIKVGLDTLYDLLQASCYLKIQNLNDLGCKTVANIIAGKTP 124
+ H K +DE+FI++ L +L A+ L+++ L DL + +A II GKTP
Sbjct: 76 RFHQVPGHSNKERKTFDEKFIRMDTKKLCELTSAADSLQLKPLVDLTSRALARIIEGKTP 135
Query: 125 EQIRQTFNIKNDFT 138
E+IR+TF++ +D T
Sbjct: 136 EEIRETFHLPDDLT 149
>Glyma16g30080.1
Length = 264
Score = 60.1 bits (144), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 40/134 (29%), Positives = 71/134 (52%), Gaps = 5/134 (3%)
Query: 9 VILMCYGGEVMEVHEALVNASPTLKSLIREKGVDGDNK---INLPN-ISIETMCKINEYV 64
+ L G + +V E + P + + + G+ G +K I+LP ++ + I +Y
Sbjct: 20 IWLQTVDGSIQQVEEEVAMFCPMICQEVLQTGM-GSSKNYAISLPQRVNPAILGLILDYC 78
Query: 65 KKHAEAVDPAKNLDAWDEEFIKVGLDTLYDLLQASCYLKIQNLNDLGCKTVANIIAGKTP 124
+ H K +DE+FI++ L +L A+ L+++ L DL + +A II GKTP
Sbjct: 79 RFHQVPGHSNKERKTFDEKFIRMDTKKLCELTSAADSLQLKPLVDLTSRALARIIEGKTP 138
Query: 125 EQIRQTFNIKNDFT 138
E+IR+TF++ +D T
Sbjct: 139 EEIRETFHLPDDLT 152
>Glyma16g30080.2
Length = 261
Score = 60.1 bits (144), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 40/134 (29%), Positives = 71/134 (52%), Gaps = 5/134 (3%)
Query: 9 VILMCYGGEVMEVHEALVNASPTLKSLIREKGVDGDNK---INLPN-ISIETMCKINEYV 64
+ L G + +V E + P + + + G+ G +K I+LP ++ + I +Y
Sbjct: 17 IWLQTVDGSIQQVEEEVAMFCPMICQEVLQTGM-GSSKNYAISLPQRVNPAILGLILDYC 75
Query: 65 KKHAEAVDPAKNLDAWDEEFIKVGLDTLYDLLQASCYLKIQNLNDLGCKTVANIIAGKTP 124
+ H K +DE+FI++ L +L A+ L+++ L DL + +A II GKTP
Sbjct: 76 RFHQVPGHSNKERKTFDEKFIRMDTKKLCELTSAADSLQLKPLVDLTSRALARIIEGKTP 135
Query: 125 EQIRQTFNIKNDFT 138
E+IR+TF++ +D T
Sbjct: 136 EEIRETFHLPDDLT 149
>Glyma09g39480.1
Length = 346
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 41/134 (30%), Positives = 71/134 (52%), Gaps = 5/134 (3%)
Query: 9 VILMCYGGEVMEVHEALVNASPTLKSLIREKGVDGDNK---INLPN-ISIETMCKINEYV 64
+ L G + +V + + P + I +KG+ G +K I LP +S T+ I +Y
Sbjct: 18 IWLETSDGSIQQVEQEIAMYCPLICQEIIQKGM-GSSKNCAICLPQRVSPATLSLILDYC 76
Query: 65 KKHAEAVDPAKNLDAWDEEFIKVGLDTLYDLLQASCYLKIQNLNDLGCKTVANIIAGKTP 124
H K ++DE+FI++ L +L A+ L+++ L DL + +A II GK+P
Sbjct: 77 HFHQVPGRSNKERKSYDEKFIRMDTKRLCELTSAADSLQLKPLVDLTSRALARIIEGKSP 136
Query: 125 EQIRQTFNIKNDFT 138
E+IR+ F++ +D T
Sbjct: 137 EEIREIFHLPDDLT 150
>Glyma03g01090.2
Length = 322
Score = 58.9 bits (141), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 40/134 (29%), Positives = 70/134 (52%), Gaps = 5/134 (3%)
Query: 9 VILMCYGGEVMEVHEALVNASPTLKSLIREKGVDGDNK---INLPN-ISIETMCKINEYV 64
V L + +V + + P + I +KG+ G +K I LP +S + I +Y
Sbjct: 6 VWLQTSDDSIQQVEQEIAMFCPLICQEIIQKGM-GSSKSCAICLPQQVSPAMLSLILDYC 64
Query: 65 KKHAEAVDPAKNLDAWDEEFIKVGLDTLYDLLQASCYLKIQNLNDLGCKTVANIIAGKTP 124
+ H K ++DE+F+++ + L +L A+ L+++ L DL + +A II GKTP
Sbjct: 65 RFHQVPGRSNKERKSYDEKFVRIDTERLCELTSAADSLQLKPLVDLTSRALARIIEGKTP 124
Query: 125 EQIRQTFNIKNDFT 138
E+IR F++ +D T
Sbjct: 125 EEIRDIFHLPDDLT 138
>Glyma03g01090.1
Length = 330
Score = 58.5 bits (140), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 40/134 (29%), Positives = 70/134 (52%), Gaps = 5/134 (3%)
Query: 9 VILMCYGGEVMEVHEALVNASPTLKSLIREKGVDGDNK---INLPN-ISIETMCKINEYV 64
V L + +V + + P + I +KG+ G +K I LP +S + I +Y
Sbjct: 18 VWLQTSDDSIQQVEQEIAMFCPLICQEIIQKGM-GSSKSCAICLPQQVSPAMLSLILDYC 76
Query: 65 KKHAEAVDPAKNLDAWDEEFIKVGLDTLYDLLQASCYLKIQNLNDLGCKTVANIIAGKTP 124
+ H K ++DE+F+++ + L +L A+ L+++ L DL + +A II GKTP
Sbjct: 77 RFHQVPGRSNKERKSYDEKFVRIDTERLCELTSAADSLQLKPLVDLTSRALARIIEGKTP 136
Query: 125 EQIRQTFNIKNDFT 138
E+IR F++ +D T
Sbjct: 137 EEIRDIFHLPDDLT 150
>Glyma04g16940.1
Length = 88
Score = 50.8 bits (120), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 31/83 (37%), Positives = 49/83 (59%), Gaps = 7/83 (8%)
Query: 19 MEVHEALVNASPTLKSLIREKGVDGDNKINLPNISIETMCKINEYVKKHAEA--VD---P 73
EV E + T++ +I + VDG+ I LPN++ + + K+ +Y KKH EA VD
Sbjct: 7 FEVKEVVAMELQTIEHMIEDNCVDGE--IPLPNVTSKILVKVIKYCKKHVEANYVDENLS 64
Query: 74 AKNLDAWDEEFIKVGLDTLYDLL 96
L AWD++F+K+ TL+DL+
Sbjct: 65 EDELKAWDDDFVKLDQATLFDLI 87
>Glyma11g13370.1
Length = 137
Score = 50.1 bits (118), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 32/111 (28%), Positives = 57/111 (51%), Gaps = 3/111 (2%)
Query: 31 TLKSLIREKGVDGDNKINLP--NISIETMCKINEYVKKHAEAVDPAKNLDAWDEEFIK-V 87
T+++ I + D I +P N++ + ++ EY K+H A A NL ++E F +
Sbjct: 3 TVQAYIDDTSADTSAAIAIPLHNVAGRELARMVEYCKEHRRASVSAGNLKEFEERFAAAL 62
Query: 88 GLDTLYDLLQASCYLKIQNLNDLGCKTVANIIAGKTPEQIRQTFNIKNDFT 138
L + DL+ A+ YL + L + + +A I K+ E +R F + ND+T
Sbjct: 63 NLYEMKDLIIAANYLNTKKLLESLSRCIAKAIKNKSVEFVRDYFGVTNDYT 113
>Glyma15g25090.1
Length = 98
Score = 49.7 bits (117), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/93 (34%), Positives = 53/93 (56%), Gaps = 7/93 (7%)
Query: 9 VILMCYGGEVMEVHEALVNASPTLKSLIREKGVDGDNKINLPNISIETMCKINEYVKKHA 68
+ L E EV EA+ S +K +I + VD NK+ LPN + + + ++ +Y KKH
Sbjct: 7 ITLKSLDVEAFEVEEAVAVKSQMIKHMIEDNYVD--NKVPLPNATNKILAEVIKYCKKHV 64
Query: 69 EA----VDPAKN-LDAWDEEFIKVGLDTLYDLL 96
+A P+++ L AW+ +F+KV TL+DL+
Sbjct: 65 DANCTDEKPSEDELKAWEADFVKVDQVTLFDLI 97
>Glyma14g40030.1
Length = 98
Score = 47.8 bits (112), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 38/99 (38%), Positives = 58/99 (58%), Gaps = 9/99 (9%)
Query: 5 SSTKVILMCYGGEVMEVHEALVNA--SPTLKSLIREKGVDGDNKINLPNISIETMCKINE 62
S+ K+ L GE EV EA+ A S T+K +I + D+ I LPN++ + + K+ +
Sbjct: 1 STKKITLKSSDGETFEVEEAVAVAVESQTIKLMIEDNC--ADSGIPLPNVTSKILAKVID 58
Query: 63 YVKKHAEA----VDPAKN-LDAWDEEFIKVGLDTLYDLL 96
Y KKH EA P+++ L AWD +F+KV TL+DL+
Sbjct: 59 YCKKHVEANCADEKPSEDELKAWDADFVKVDQATLFDLI 97