Miyakogusa Predicted Gene

Lj5g3v2242520.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj5g3v2242520.1 Non Chatacterized Hit- tr|D7LCN3|D7LCN3_ARALL
Putative uncharacterized protein OS=Arabidopsis
lyrata,48.15,2e-32,Skp1,SKP1 component, dimerisation; Skp1_POZ,SKP1
component, POZ; no description,BTB/POZ fold; SKP1,S,gene.g63339.t1.1
         (154 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma11g08440.1                                                       140   7e-34
Glyma01g36850.2                                                       138   2e-33
Glyma02g05120.1                                                       132   1e-31
Glyma16g23230.1                                                       130   6e-31
Glyma01g36850.1                                                       125   1e-29
Glyma15g41490.1                                                        70   6e-13
Glyma11g13370.1                                                        69   2e-12
Glyma18g46780.1                                                        63   9e-11
Glyma09g25090.1                                                        62   3e-10
Glyma07g07600.1                                                        62   3e-10
Glyma09g39480.1                                                        62   3e-10
Glyma16g30080.2                                                        61   4e-10
Glyma16g30080.1                                                        61   4e-10
Glyma03g01090.2                                                        60   1e-09
Glyma03g01090.1                                                        60   1e-09
Glyma04g16940.1                                                        54   6e-08
Glyma15g25090.1                                                        52   2e-07
Glyma14g40030.1                                                        51   4e-07

>Glyma11g08440.1 
          Length = 155

 Score =  140 bits (352), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 78/156 (50%), Positives = 108/156 (69%), Gaps = 7/156 (4%)

Query: 4   SSSTKVILMCYGGEVMEVHEALVNASPTLKSLIREKGVDGDNKINLPNISIETMCKINEY 63
           SS+ K+ L    GE  EV EA+   S T+K +I +     D+ I LPN++ + + K+ EY
Sbjct: 2   SSAKKITLKSSDGEAFEVEEAVALESQTIKHMIEDDC--ADSGIPLPNVTSKILAKVIEY 59

Query: 64  VKKHAEAVDPAK-----NLDAWDEEFIKVDLNTLFNLIEATHYLKIQNLIDLGCKTVANM 118
            KKH EA +P       +L AWD EF+KVD  TLF+LI A +YL I++L+DL C+TVA+M
Sbjct: 60  CKKHVEAANPEDKPSEDDLKAWDAEFVKVDQATLFDLILAANYLNIKSLLDLTCQTVADM 119

Query: 119 MRGKTTEQMRQTFNIKNDFTPEEEEKVKEKFAWAFE 154
           ++GKT E++R+TFNIKNDFTPEEEE+V+ +  WAFE
Sbjct: 120 IKGKTPEEIRKTFNIKNDFTPEEEEEVRRENQWAFE 155


>Glyma01g36850.2 
          Length = 155

 Score =  138 bits (348), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 77/156 (49%), Positives = 108/156 (69%), Gaps = 7/156 (4%)

Query: 4   SSSTKVILMCYGGEVMEVHEALVNASPTLKSLIREKGVDGDNKINLPNISIETMCKINEY 63
           SS+ K+ L    GE  EV EA+   S T+K +I +     D+ I LPN++ + + K+ EY
Sbjct: 2   SSAKKITLKSSDGEAFEVDEAVALESQTIKHMIEDDC--ADSGIPLPNVTSKILAKVIEY 59

Query: 64  VKKHAEAVDPAK-----NLDAWDEEFIKVDLNTLFNLIEATHYLKIQNLIDLGCKTVANM 118
            KKH EA +P       +L AWD +F+KVD  TLF+LI A +YL I++L+DL C+TVA+M
Sbjct: 60  CKKHVEAANPEDKPSEDDLKAWDADFVKVDQATLFDLILAANYLNIKSLLDLTCQTVADM 119

Query: 119 MRGKTTEQMRQTFNIKNDFTPEEEEKVKEKFAWAFE 154
           ++GKT E++R+TFNIKNDFTPEEEE+V+ +  WAFE
Sbjct: 120 IKGKTPEEIRKTFNIKNDFTPEEEEEVRRENQWAFE 155


>Glyma02g05120.1 
          Length = 155

 Score =  132 bits (333), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 76/156 (48%), Positives = 109/156 (69%), Gaps = 7/156 (4%)

Query: 4   SSSTKVILMCYGGEVMEVHEALVNASPTLKSLIREKGVDGDNKINLPNISIETMCKINEY 63
           +S+ K+ L    GE  EV EA+   S T+K +I +     D+ I LPN++ + + K+ EY
Sbjct: 2   ASTKKITLKSSDGEAFEVEEAVAVESQTIKHMIEDNC--ADSGIPLPNVTSKILAKVIEY 59

Query: 64  VKKHAEA----VDPAKN-LDAWDEEFIKVDLNTLFNLIEATHYLKIQNLIDLGCKTVANM 118
            KKH EA      P+++ L AWD +F+KVD  TLF+LI A +YL I++L+DL C+TVA+M
Sbjct: 60  CKKHVEANCADEKPSEDELKAWDADFVKVDQATLFDLILAANYLNIKSLLDLTCQTVADM 119

Query: 119 MRGKTTEQMRQTFNIKNDFTPEEEEKVKEKFAWAFE 154
           ++GKT E++R+TFNIKNDFTPEEEE+V+ +  WAFE
Sbjct: 120 IKGKTPEEIRKTFNIKNDFTPEEEEEVRRENQWAFE 155


>Glyma16g23230.1 
          Length = 155

 Score =  130 bits (327), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 75/156 (48%), Positives = 108/156 (69%), Gaps = 7/156 (4%)

Query: 4   SSSTKVILMCYGGEVMEVHEALVNASPTLKSLIREKGVDGDNKINLPNISIETMCKINEY 63
           +S+ K+ L    GE  EV EA+   S T+K +I +     D+ I LPN++ + + K+ EY
Sbjct: 2   ASTKKITLKSSDGEAFEVEEAVALESQTIKHMIEDDC--ADSGIPLPNVTSKILAKVIEY 59

Query: 64  VKKHAEAVD----PAKN-LDAWDEEFIKVDLNTLFNLIEATHYLKIQNLIDLGCKTVANM 118
            KKH EA      P+++ L AWD +F+ VD  TLF+LI A +YL I++L+DL C+TVA+M
Sbjct: 60  CKKHVEANSADEKPSEDVLKAWDVDFVNVDQATLFDLILAANYLNIKSLLDLTCQTVADM 119

Query: 119 MRGKTTEQMRQTFNIKNDFTPEEEEKVKEKFAWAFE 154
           ++GKT E++R+TFNIKNDFTPEEEE+V+ +  WAFE
Sbjct: 120 IKGKTPEEIRKTFNIKNDFTPEEEEEVRRENQWAFE 155


>Glyma01g36850.1 
          Length = 179

 Score =  125 bits (315), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 77/180 (42%), Positives = 107/180 (59%), Gaps = 31/180 (17%)

Query: 4   SSSTKVILMCYGGEVMEVHEALVNASPTLKSLIREKGVDGDNKINLPNISIETMCKINEY 63
           SS+ K+ L    GE  EV EA+   S T+K +I +     D+ I LPN++ + + K+ EY
Sbjct: 2   SSAKKITLKSSDGEAFEVDEAVALESQTIKHMIEDDC--ADSGIPLPNVTSKILAKVIEY 59

Query: 64  VKKHAEAVDPAK-----NLDAWDEEFIKVDLNTLFNLIEATH------------------ 100
            KKH EA +P       +L AWD +F+KVD  TLF+LI   H                  
Sbjct: 60  CKKHVEAANPEDKPSEDDLKAWDADFVKVDQATLFDLILVQHLHDIQFHCSTLLFSLCLF 119

Query: 101 ------YLKIQNLIDLGCKTVANMMRGKTTEQMRQTFNIKNDFTPEEEEKVKEKFAWAFE 154
                 YL I++L+DL C+TVA+M++GKT E++R+TFNIKNDFTPEEEE+V+ +  WAFE
Sbjct: 120 SSSAANYLNIKSLLDLTCQTVADMIKGKTPEEIRKTFNIKNDFTPEEEEEVRRENQWAFE 179


>Glyma15g41490.1 
          Length = 107

 Score = 70.5 bits (171), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 39/116 (33%), Positives = 69/116 (59%), Gaps = 13/116 (11%)

Query: 31  TLKSLIREKGVDGDNKINLPNISIETMCKINEYVKKHAEAVDPAKNLDAWDEEFIK-VDL 89
           T+++ I +   +    I LPN++  T+ +I E+  +             +DEEF+K + +
Sbjct: 3   TIQTFIEDNNNETSIPIPLPNVTSNTLRRILEFKAR------------GFDEEFVKTLGM 50

Query: 90  NTLFNLIEATHYLKIQNLIDLGCKTVANMMRGKTTEQMRQTFNIKNDFTPEEEEKV 145
           + +F LI A +YL ++ L+D+  K +A+ ++ K+ E +R+ FNI NDFTPEEE K+
Sbjct: 51  DEVFELILAANYLNMKTLLDILTKIIADFIKNKSVEFVRKFFNIVNDFTPEEEAKI 106


>Glyma11g13370.1 
          Length = 137

 Score = 68.9 bits (167), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 39/126 (30%), Positives = 70/126 (55%), Gaps = 3/126 (2%)

Query: 31  TLKSLIREKGVDGDNKINLP--NISIETMCKINEYVKKHAEAVDPAKNLDAWDEEFIK-V 87
           T+++ I +   D    I +P  N++   + ++ EY K+H  A   A NL  ++E F   +
Sbjct: 3   TVQAYIDDTSADTSAAIAIPLHNVAGRELARMVEYCKEHRRASVSAGNLKEFEERFAAAL 62

Query: 88  DLNTLFNLIEATHYLKIQNLIDLGCKTVANMMRGKTTEQMRQTFNIKNDFTPEEEEKVKE 147
           +L  + +LI A +YL  + L++   + +A  ++ K+ E +R  F + ND+T EEE + +E
Sbjct: 63  NLYEMKDLIIAANYLNTKKLLESLSRCIAKAIKNKSVEFVRDYFGVTNDYTTEEEAQYRE 122

Query: 148 KFAWAF 153
             AWAF
Sbjct: 123 TNAWAF 128


>Glyma18g46780.1 
          Length = 320

 Score = 63.2 bits (152), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 39/130 (30%), Positives = 71/130 (54%), Gaps = 5/130 (3%)

Query: 16  GEVMEVHEALVNASPTLKSLIREKGVDGDNK---INLPN-ISIETMCKINEYVKKHAEAV 71
           G + +V + +    P +   I +KG+ G +K   I LP  +S  T+  I +Y + H    
Sbjct: 25  GSIQQVEQEIAMYCPLICQEIIQKGM-GSSKSCAICLPQRVSPVTLSLILDYCRFHQVPG 83

Query: 72  DPAKNLDAWDEEFIKVDLNTLFNLIEATHYLKIQNLIDLGCKTVANMMRGKTTEQMRQTF 131
              K   ++DE+FI++D   L  L  A   L+++ L+DL  + +A ++ GK+ E++R+ F
Sbjct: 84  RSNKERKSYDEKFIRMDTKRLCELTSAADSLQLKPLVDLTSRALARIIEGKSPEEIREIF 143

Query: 132 NIKNDFTPEE 141
           ++ +D T EE
Sbjct: 144 HLPDDLTEEE 153


>Glyma09g25090.1 
          Length = 366

 Score = 61.6 bits (148), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 39/135 (28%), Positives = 71/135 (52%), Gaps = 5/135 (3%)

Query: 11  LMCYGGEVMEVHEALVNASPTLKSLIREKGVDGDNK---INLPN-ISIETMCKINEYVKK 66
           L    G + +V E +    P +   + + G+ G +K   I+LP  ++   +  I +Y + 
Sbjct: 19  LQTVDGSIQQVEEEVAMFCPMICQEVLQTGL-GSSKTYAISLPQRVNPAMLGLILDYCRF 77

Query: 67  HAEAVDPAKNLDAWDEEFIKVDLNTLFNLIEATHYLKIQNLIDLGCKTVANMMRGKTTEQ 126
           H       K    +DE+FI++D   L  L  A   L+++ L+DL  + +A ++ GKT E+
Sbjct: 78  HQVPGHSNKERKTFDEKFIRMDTKKLCELTSAADSLQLKPLVDLTSRALARIIEGKTPEE 137

Query: 127 MRQTFNIKNDFTPEE 141
           +R+TF++ +D T EE
Sbjct: 138 IRETFHLPDDLTEEE 152


>Glyma07g07600.1 
          Length = 351

 Score = 61.6 bits (148), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 40/137 (29%), Positives = 71/137 (51%), Gaps = 5/137 (3%)

Query: 9   VILMCYGGEVMEVHEALVNASPTLKSLIREKGVDGDNK---INLPN-ISIETMCKINEYV 64
           V L      + +V + +   SP +   I +KG+ G +K   I LP  +S   +  I +Y 
Sbjct: 18  VWLQTSDDSIQQVEQEIAMFSPLICQEIIQKGM-GSSKNCAICLPQQVSPAMLSLILDYC 76

Query: 65  KKHAEAVDPAKNLDAWDEEFIKVDLNTLFNLIEATHYLKIQNLIDLGCKTVANMMRGKTT 124
           + H       K   ++DE+F+++D   L  L  A   L+++ L+DL  + +A ++ GKT 
Sbjct: 77  RFHQVPGRSNKERKSYDEKFVRIDTERLCELTSAADSLQLKPLVDLTSRALARIIEGKTP 136

Query: 125 EQMRQTFNIKNDFTPEE 141
           E++R  F++ +D T EE
Sbjct: 137 EEIRDIFHLPDDLTEEE 153


>Glyma09g39480.1 
          Length = 346

 Score = 61.6 bits (148), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 39/130 (30%), Positives = 70/130 (53%), Gaps = 5/130 (3%)

Query: 16  GEVMEVHEALVNASPTLKSLIREKGVDGDNK---INLPN-ISIETMCKINEYVKKHAEAV 71
           G + +V + +    P +   I +KG+ G +K   I LP  +S  T+  I +Y   H    
Sbjct: 25  GSIQQVEQEIAMYCPLICQEIIQKGM-GSSKNCAICLPQRVSPATLSLILDYCHFHQVPG 83

Query: 72  DPAKNLDAWDEEFIKVDLNTLFNLIEATHYLKIQNLIDLGCKTVANMMRGKTTEQMRQTF 131
              K   ++DE+FI++D   L  L  A   L+++ L+DL  + +A ++ GK+ E++R+ F
Sbjct: 84  RSNKERKSYDEKFIRMDTKRLCELTSAADSLQLKPLVDLTSRALARIIEGKSPEEIREIF 143

Query: 132 NIKNDFTPEE 141
           ++ +D T EE
Sbjct: 144 HLPDDLTEEE 153


>Glyma16g30080.2 
          Length = 261

 Score = 61.2 bits (147), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 39/135 (28%), Positives = 71/135 (52%), Gaps = 5/135 (3%)

Query: 11  LMCYGGEVMEVHEALVNASPTLKSLIREKGVDGDNK---INLPN-ISIETMCKINEYVKK 66
           L    G + +V E +    P +   + + G+ G +K   I+LP  ++   +  I +Y + 
Sbjct: 19  LQTVDGSIQQVEEEVAMFCPMICQEVLQTGM-GSSKNYAISLPQRVNPAILGLILDYCRF 77

Query: 67  HAEAVDPAKNLDAWDEEFIKVDLNTLFNLIEATHYLKIQNLIDLGCKTVANMMRGKTTEQ 126
           H       K    +DE+FI++D   L  L  A   L+++ L+DL  + +A ++ GKT E+
Sbjct: 78  HQVPGHSNKERKTFDEKFIRMDTKKLCELTSAADSLQLKPLVDLTSRALARIIEGKTPEE 137

Query: 127 MRQTFNIKNDFTPEE 141
           +R+TF++ +D T EE
Sbjct: 138 IRETFHLPDDLTEEE 152


>Glyma16g30080.1 
          Length = 264

 Score = 61.2 bits (147), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 39/135 (28%), Positives = 71/135 (52%), Gaps = 5/135 (3%)

Query: 11  LMCYGGEVMEVHEALVNASPTLKSLIREKGVDGDNK---INLPN-ISIETMCKINEYVKK 66
           L    G + +V E +    P +   + + G+ G +K   I+LP  ++   +  I +Y + 
Sbjct: 22  LQTVDGSIQQVEEEVAMFCPMICQEVLQTGM-GSSKNYAISLPQRVNPAILGLILDYCRF 80

Query: 67  HAEAVDPAKNLDAWDEEFIKVDLNTLFNLIEATHYLKIQNLIDLGCKTVANMMRGKTTEQ 126
           H       K    +DE+FI++D   L  L  A   L+++ L+DL  + +A ++ GKT E+
Sbjct: 81  HQVPGHSNKERKTFDEKFIRMDTKKLCELTSAADSLQLKPLVDLTSRALARIIEGKTPEE 140

Query: 127 MRQTFNIKNDFTPEE 141
           +R+TF++ +D T EE
Sbjct: 141 IRETFHLPDDLTEEE 155


>Glyma03g01090.2 
          Length = 322

 Score = 59.7 bits (143), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 39/137 (28%), Positives = 70/137 (51%), Gaps = 5/137 (3%)

Query: 9   VILMCYGGEVMEVHEALVNASPTLKSLIREKGVDGDNK---INLPN-ISIETMCKINEYV 64
           V L      + +V + +    P +   I +KG+ G +K   I LP  +S   +  I +Y 
Sbjct: 6   VWLQTSDDSIQQVEQEIAMFCPLICQEIIQKGM-GSSKSCAICLPQQVSPAMLSLILDYC 64

Query: 65  KKHAEAVDPAKNLDAWDEEFIKVDLNTLFNLIEATHYLKIQNLIDLGCKTVANMMRGKTT 124
           + H       K   ++DE+F+++D   L  L  A   L+++ L+DL  + +A ++ GKT 
Sbjct: 65  RFHQVPGRSNKERKSYDEKFVRIDTERLCELTSAADSLQLKPLVDLTSRALARIIEGKTP 124

Query: 125 EQMRQTFNIKNDFTPEE 141
           E++R  F++ +D T EE
Sbjct: 125 EEIRDIFHLPDDLTEEE 141


>Glyma03g01090.1 
          Length = 330

 Score = 59.7 bits (143), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 39/137 (28%), Positives = 70/137 (51%), Gaps = 5/137 (3%)

Query: 9   VILMCYGGEVMEVHEALVNASPTLKSLIREKGVDGDNK---INLPN-ISIETMCKINEYV 64
           V L      + +V + +    P +   I +KG+ G +K   I LP  +S   +  I +Y 
Sbjct: 18  VWLQTSDDSIQQVEQEIAMFCPLICQEIIQKGM-GSSKSCAICLPQQVSPAMLSLILDYC 76

Query: 65  KKHAEAVDPAKNLDAWDEEFIKVDLNTLFNLIEATHYLKIQNLIDLGCKTVANMMRGKTT 124
           + H       K   ++DE+F+++D   L  L  A   L+++ L+DL  + +A ++ GKT 
Sbjct: 77  RFHQVPGRSNKERKSYDEKFVRIDTERLCELTSAADSLQLKPLVDLTSRALARIIEGKTP 136

Query: 125 EQMRQTFNIKNDFTPEE 141
           E++R  F++ +D T EE
Sbjct: 137 EEIRDIFHLPDDLTEEE 153


>Glyma04g16940.1 
          Length = 88

 Score = 53.9 bits (128), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 32/83 (38%), Positives = 50/83 (60%), Gaps = 7/83 (8%)

Query: 19 MEVHEALVNASPTLKSLIREKGVDGDNKINLPNISIETMCKINEYVKKHAEAVDPAKNLD 78
           EV E +     T++ +I +  VDG+  I LPN++ + + K+ +Y KKH EA    +NL 
Sbjct: 7  FEVKEVVAMELQTIEHMIEDNCVDGE--IPLPNVTSKILVKVIKYCKKHVEANYVDENLS 64

Query: 79 -----AWDEEFIKVDLNTLFNLI 96
               AWD++F+K+D  TLF+LI
Sbjct: 65 EDELKAWDDDFVKLDQATLFDLI 87


>Glyma15g25090.1 
          Length = 98

 Score = 52.4 bits (124), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 34/93 (36%), Positives = 54/93 (58%), Gaps = 7/93 (7%)

Query: 9  VILMCYGGEVMEVHEALVNASPTLKSLIREKGVDGDNKINLPNISIETMCKINEYVKKHA 68
          + L     E  EV EA+   S  +K +I +  VD  NK+ LPN + + + ++ +Y KKH 
Sbjct: 7  ITLKSLDVEAFEVEEAVAVKSQMIKHMIEDNYVD--NKVPLPNATNKILAEVIKYCKKHV 64

Query: 69 EA----VDPAKN-LDAWDEEFIKVDLNTLFNLI 96
          +A      P+++ L AW+ +F+KVD  TLF+LI
Sbjct: 65 DANCTDEKPSEDELKAWEADFVKVDQVTLFDLI 97


>Glyma14g40030.1 
          Length = 98

 Score = 51.2 bits (121), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 40/99 (40%), Positives = 59/99 (59%), Gaps = 9/99 (9%)

Query: 5  SSTKVILMCYGGEVMEVHEALVNA--SPTLKSLIREKGVDGDNKINLPNISIETMCKINE 62
          S+ K+ L    GE  EV EA+  A  S T+K +I +     D+ I LPN++ + + K+ +
Sbjct: 1  STKKITLKSSDGETFEVEEAVAVAVESQTIKLMIEDNC--ADSGIPLPNVTSKILAKVID 58

Query: 63 YVKKHAEA----VDPAKN-LDAWDEEFIKVDLNTLFNLI 96
          Y KKH EA      P+++ L AWD +F+KVD  TLF+LI
Sbjct: 59 YCKKHVEANCADEKPSEDELKAWDADFVKVDQATLFDLI 97