Miyakogusa Predicted Gene

Lj5g3v2241460.3

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj5g3v2241460.3 Non Chatacterized Hit- tr|I3SEW9|I3SEW9_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=2
SV=1,99.31,0,RIBOSOMAL_S17,Ribosomal protein S17, conserved site;
arch_S17P: archaeal ribosomal protein S17P,Ribo,CUFF.57331.3
         (146 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma09g12430.1                                                       269   6e-73
Glyma09g12420.1                                                       269   8e-73
Glyma17g11430.1                                                       263   3e-71
Glyma13g23400.1                                                       262   8e-71
Glyma13g23400.2                                                       171   3e-43
Glyma01g25850.1                                                       171   3e-43
Glyma01g25840.1                                                       119   1e-27
Glyma19g05750.1                                                        54   5e-08

>Glyma09g12430.1 
          Length = 159

 Score =  269 bits (688), Expect = 6e-73,   Method: Compositional matrix adjust.
 Identities = 129/146 (88%), Positives = 133/146 (91%)

Query: 1   MAEQTEKAFLKQPKVFLCSXXXXXXXXXXXXXNRFWKSIGLGFKTPRDAIEGSYIDKKCP 60
           MAEQTEKAFLKQPKVFLCS             NRFWKSIGLGFKTPRDAIEG+YIDKKCP
Sbjct: 1   MAEQTEKAFLKQPKVFLCSKKGGKGKRPGKGGNRFWKSIGLGFKTPRDAIEGTYIDKKCP 60

Query: 61  FTGNVSVRGRILAGTCHSAKMTRTIIVRRNYLHFIKKYQRYEKRHSNIPAHISPCFRVKE 120
           FTGNVS+RGRILAGTCHSAKMTRTIIVRRNYLHFIKKYQRYEKRHSNIP+HISPCFRVKE
Sbjct: 61  FTGNVSIRGRILAGTCHSAKMTRTIIVRRNYLHFIKKYQRYEKRHSNIPSHISPCFRVKE 120

Query: 121 GDHVIIGQCRPLSKTVRFNVLKVIPA 146
           GDHVIIGQCRP+SKTVRFNVLKVIPA
Sbjct: 121 GDHVIIGQCRPISKTVRFNVLKVIPA 146


>Glyma09g12420.1 
          Length = 159

 Score =  269 bits (687), Expect = 8e-73,   Method: Compositional matrix adjust.
 Identities = 129/146 (88%), Positives = 132/146 (90%)

Query: 1   MAEQTEKAFLKQPKVFLCSXXXXXXXXXXXXXNRFWKSIGLGFKTPRDAIEGSYIDKKCP 60
           MAEQTEKAFLKQPKVFLCS             NRFWKSIGLGFKTPRDAIEG+YIDKKCP
Sbjct: 1   MAEQTEKAFLKQPKVFLCSKKGGKGKRPGKGGNRFWKSIGLGFKTPRDAIEGTYIDKKCP 60

Query: 61  FTGNVSVRGRILAGTCHSAKMTRTIIVRRNYLHFIKKYQRYEKRHSNIPAHISPCFRVKE 120
           FTGNVS+RGRILAGTCHSAKMTRTIIVRRNYLHFIKKYQRYEKRHSNIPAH SPCFRVKE
Sbjct: 61  FTGNVSIRGRILAGTCHSAKMTRTIIVRRNYLHFIKKYQRYEKRHSNIPAHTSPCFRVKE 120

Query: 121 GDHVIIGQCRPLSKTVRFNVLKVIPA 146
           GDHVIIGQCRP+SKTVRFNVLKVIPA
Sbjct: 121 GDHVIIGQCRPISKTVRFNVLKVIPA 146


>Glyma17g11430.1 
          Length = 159

 Score =  263 bits (673), Expect = 3e-71,   Method: Compositional matrix adjust.
 Identities = 127/146 (86%), Positives = 130/146 (89%)

Query: 1   MAEQTEKAFLKQPKVFLCSXXXXXXXXXXXXXNRFWKSIGLGFKTPRDAIEGSYIDKKCP 60
           MAEQTEKAFLKQPKVFL S             NRFWKSIGLGFKTPR+AIEG+YIDKKCP
Sbjct: 1   MAEQTEKAFLKQPKVFLSSKKTGKGKRPGKGGNRFWKSIGLGFKTPREAIEGTYIDKKCP 60

Query: 61  FTGNVSVRGRILAGTCHSAKMTRTIIVRRNYLHFIKKYQRYEKRHSNIPAHISPCFRVKE 120
           FTGNVS+RGRILAGTCHSAKM RTIIVRRNYLHFIKKYQRYEKRHSNIPAHISP FRVKE
Sbjct: 61  FTGNVSIRGRILAGTCHSAKMNRTIIVRRNYLHFIKKYQRYEKRHSNIPAHISPAFRVKE 120

Query: 121 GDHVIIGQCRPLSKTVRFNVLKVIPA 146
           GDHVIIGQCRPLSKTVRFNVLKVIPA
Sbjct: 121 GDHVIIGQCRPLSKTVRFNVLKVIPA 146


>Glyma13g23400.1 
          Length = 159

 Score =  262 bits (670), Expect = 8e-71,   Method: Compositional matrix adjust.
 Identities = 126/146 (86%), Positives = 130/146 (89%)

Query: 1   MAEQTEKAFLKQPKVFLCSXXXXXXXXXXXXXNRFWKSIGLGFKTPRDAIEGSYIDKKCP 60
           MAEQTEKAFLKQPKVFL +             NRFWKSIGLGFKTPR+AIEG+YIDKKCP
Sbjct: 1   MAEQTEKAFLKQPKVFLSTKKTGKGKRPGKGGNRFWKSIGLGFKTPREAIEGTYIDKKCP 60

Query: 61  FTGNVSVRGRILAGTCHSAKMTRTIIVRRNYLHFIKKYQRYEKRHSNIPAHISPCFRVKE 120
           FTGNVS+RGRILAGTCHSAKM RTIIVRRNYLHFIKKYQRYEKRHSNIPAHISP FRVKE
Sbjct: 61  FTGNVSIRGRILAGTCHSAKMNRTIIVRRNYLHFIKKYQRYEKRHSNIPAHISPAFRVKE 120

Query: 121 GDHVIIGQCRPLSKTVRFNVLKVIPA 146
           GDHVIIGQCRPLSKTVRFNVLKVIPA
Sbjct: 121 GDHVIIGQCRPLSKTVRFNVLKVIPA 146


>Glyma13g23400.2 
          Length = 116

 Score =  171 bits (432), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 82/102 (80%), Positives = 86/102 (84%)

Query: 1   MAEQTEKAFLKQPKVFLCSXXXXXXXXXXXXXNRFWKSIGLGFKTPRDAIEGSYIDKKCP 60
           MAEQTEKAFLKQPKVFL +             NRFWKSIGLGFKTPR+AIEG+YIDKKCP
Sbjct: 1   MAEQTEKAFLKQPKVFLSTKKTGKGKRPGKGGNRFWKSIGLGFKTPREAIEGTYIDKKCP 60

Query: 61  FTGNVSVRGRILAGTCHSAKMTRTIIVRRNYLHFIKKYQRYE 102
           FTGNVS+RGRILAGTCHSAKM RTIIVRRNYLHFIKKYQRY 
Sbjct: 61  FTGNVSIRGRILAGTCHSAKMNRTIIVRRNYLHFIKKYQRYS 102


>Glyma01g25850.1 
          Length = 98

 Score =  171 bits (432), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 83/95 (87%), Positives = 87/95 (91%), Gaps = 5/95 (5%)

Query: 52  GSYIDKKCPFTGNVSVRGRILAGTCHSAKMTRTIIVRRNYLHFIKKYQRYEKRHSNIPAH 111
           G++IDKKCPFTGNVS+RGRILAGTCHSAKMTRTIIV RNYLHFIKKYQRYEKRHSNI AH
Sbjct: 1   GTHIDKKCPFTGNVSIRGRILAGTCHSAKMTRTIIVMRNYLHFIKKYQRYEKRHSNIHAH 60

Query: 112 ISPCFRVKEGDHVIIGQCRPLSKTVRFNVLKVIPA 146
           ISPCFRVKEGDHVIIGQC     +V FNVLKVIPA
Sbjct: 61  ISPCFRVKEGDHVIIGQC-----SVSFNVLKVIPA 90


>Glyma01g25840.1 
          Length = 110

 Score =  119 bits (298), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 63/97 (64%), Positives = 72/97 (74%), Gaps = 3/97 (3%)

Query: 53  SYIDKKCPFTGNVSVRGRILAGTCHSAKMTRTIIVRRNYLHFIKKYQRYE---KRHSNIP 109
           +YIDKKCPFTGNVS+RGRILAGTCHSAKM+RTIIVRRNYLHFIKKYQR+       SN+ 
Sbjct: 1   TYIDKKCPFTGNVSIRGRILAGTCHSAKMSRTIIVRRNYLHFIKKYQRHSPIIPSASNMK 60

Query: 110 AHISPCFRVKEGDHVIIGQCRPLSKTVRFNVLKVIPA 146
           + I           V+  +  P+SKTVRFNVLKVIP 
Sbjct: 61  SVIQIFQHTYHLVSVLRKEIMPISKTVRFNVLKVIPG 97


>Glyma19g05750.1 
          Length = 46

 Score = 54.3 bits (129), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 26/46 (56%), Positives = 30/46 (65%)

Query: 7  KAFLKQPKVFLCSXXXXXXXXXXXXXNRFWKSIGLGFKTPRDAIEG 52
          K FLKQPKVFL S             N FWKSIGLGFKTP+++I+G
Sbjct: 1  KVFLKQPKVFLISKKTGKGKRPGKGGNHFWKSIGLGFKTPKESIKG 46