Miyakogusa Predicted Gene

Lj5g3v2241270.2

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj5g3v2241270.2 Non Chatacterized Hit- tr|D8RHS1|D8RHS1_SELML
Putative uncharacterized protein OS=Selaginella
moelle,28.24,0.00000000000001,coiled-coil,NULL; seg,NULL,CUFF.57023.2
         (369 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma20g24300.1                                                       474   e-134
Glyma10g42740.3                                                       163   2e-40
Glyma10g42740.2                                                       163   2e-40
Glyma10g42740.1                                                       163   2e-40

>Glyma20g24300.1 
          Length = 320

 Score =  474 bits (1220), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 244/325 (75%), Positives = 270/325 (83%), Gaps = 10/325 (3%)

Query: 46  EKAMMTPWEQHSGVIKLSRYDYNAPASLLLHSHSGFLITCTIKREKSATKEALSILEKFV 105
           E+  M+PWEQHS VIKL R+DYNAP+SLL +SHSGFLITCTIKREKSATKEA+SIL KF+
Sbjct: 3   EEKGMSPWEQHSAVIKLPRFDYNAPSSLLRNSHSGFLITCTIKREKSATKEAISILHKFL 62

Query: 106 GAFNAGGFECSKNPGEY-SSFKRMRVDTQDIGGECLDVKETESVTDNSG-DGKVLSPAKA 163
           G+   G +    NP E  ++ KR ++ TQD   EC D    ES T NSG DGK+ SP KA
Sbjct: 63  GS---GHYHTLNNPNEEDTTSKRRKICTQDAAEECFD----ESPTANSGADGKLSSPVKA 115

Query: 164 EAEDKDGVTDLSLVKLTRNGLLLFIYPNNMFPDTVNIVSNIIQSLESGSTSLPVWCHRIF 223
           EAE KDG+ +LSLVKLTRNGLLL  +P N  PDTV IVSNIIQ+LESG+ SLPVWCHRIF
Sbjct: 116 EAE-KDGIANLSLVKLTRNGLLLLTFPINTHPDTVTIVSNIIQALESGTVSLPVWCHRIF 174

Query: 224 PIQATCRLNEKELQEVVSMLVKKFLASKQGKLERPLKFAVGYNRRGIEDTKFAKENSNGS 283
           PIQATC LNEKELQEVVSMLVKKFLA KQ KLERPLKFAVG+NRRGIE+T  AKENSN S
Sbjct: 175 PIQATCNLNEKELQEVVSMLVKKFLADKQDKLERPLKFAVGFNRRGIEETTLAKENSNDS 234

Query: 284 NAFSLLDRNKCFSVVASAVNDVVEDSVVDLRSPELSILVELLPLSRVPNGSLVVAVSALP 343
            AFSLLDRNKCF VVASAVN VVEDSVVDLRSPELS+LVELLPLS VP+ S++VAVS LP
Sbjct: 235 KAFSLLDRNKCFGVVASAVNHVVEDSVVDLRSPELSVLVELLPLSGVPDASIIVAVSVLP 294

Query: 344 RNLVSTKPRLCVKALTSNTKEGSVA 368
           RNLVSTKPRLC+KAL SNTKEGSVA
Sbjct: 295 RNLVSTKPRLCIKALNSNTKEGSVA 319


>Glyma10g42740.3 
          Length = 241

 Score =  163 bits (413), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 107/228 (46%), Positives = 130/228 (57%), Gaps = 50/228 (21%)

Query: 50  MTPWEQHSGVIKLSRYDYNAPASLLLHS-----HSGFLITCTIKRE-------------- 90
           M PWEQHSGVIKL RYDYN+P+SLL  S     HS FLITCTI                 
Sbjct: 11  MNPWEQHSGVIKLPRYDYNSPSSLLFSSLLRNSHSDFLITCTISSVNSLTSLHSHSSPSN 70

Query: 91  ----------KSATKEALSILEKFVGAFNAGGFECSKNPGEY-SSFKRMRVDTQDIGGEC 139
                      SATKEA+SIL KFV       ++ S NP E  +S K+ ++ TQD   EC
Sbjct: 71  LPFHFFNSSFHSATKEAISILHKFVA------YDSSNNPKEEGTSSKKRKLCTQDTADEC 124

Query: 140 LDVKETESVTDNSGDGKV-------------LSPAKAEAEDKDGVTDLSLVKLTRNGLLL 186
            D K+TES + NS +  +             ++  KAE E KDGV  LSLVKLTRNGLLL
Sbjct: 125 FDHKDTESASANSAEDGIHFFFADYTMSMILMAGVKAEGE-KDGVACLSLVKLTRNGLLL 183

Query: 187 FIYPNNMFPDTVNIVSNIIQSLESGSTSLPVWCHRIFPIQATCRLNEK 234
             +P+N  P+TVNIVSNIIQ+LESG+ +LPVWC   FP  +  +   K
Sbjct: 184 LNFPSNTPPNTVNIVSNIIQALESGTVTLPVWCQSHFPYPSYLQFERK 231


>Glyma10g42740.2 
          Length = 241

 Score =  163 bits (413), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 107/228 (46%), Positives = 130/228 (57%), Gaps = 50/228 (21%)

Query: 50  MTPWEQHSGVIKLSRYDYNAPASLLLHS-----HSGFLITCTIKRE-------------- 90
           M PWEQHSGVIKL RYDYN+P+SLL  S     HS FLITCTI                 
Sbjct: 11  MNPWEQHSGVIKLPRYDYNSPSSLLFSSLLRNSHSDFLITCTISSVNSLTSLHSHSSPSN 70

Query: 91  ----------KSATKEALSILEKFVGAFNAGGFECSKNPGEY-SSFKRMRVDTQDIGGEC 139
                      SATKEA+SIL KFV       ++ S NP E  +S K+ ++ TQD   EC
Sbjct: 71  LPFHFFNSSFHSATKEAISILHKFVA------YDSSNNPKEEGTSSKKRKLCTQDTADEC 124

Query: 140 LDVKETESVTDNSGDGKV-------------LSPAKAEAEDKDGVTDLSLVKLTRNGLLL 186
            D K+TES + NS +  +             ++  KAE E KDGV  LSLVKLTRNGLLL
Sbjct: 125 FDHKDTESASANSAEDGIHFFFADYTMSMILMAGVKAEGE-KDGVACLSLVKLTRNGLLL 183

Query: 187 FIYPNNMFPDTVNIVSNIIQSLESGSTSLPVWCHRIFPIQATCRLNEK 234
             +P+N  P+TVNIVSNIIQ+LESG+ +LPVWC   FP  +  +   K
Sbjct: 184 LNFPSNTPPNTVNIVSNIIQALESGTVTLPVWCQSHFPYPSYLQFERK 231


>Glyma10g42740.1 
          Length = 241

 Score =  163 bits (413), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 107/228 (46%), Positives = 130/228 (57%), Gaps = 50/228 (21%)

Query: 50  MTPWEQHSGVIKLSRYDYNAPASLLLHS-----HSGFLITCTIKRE-------------- 90
           M PWEQHSGVIKL RYDYN+P+SLL  S     HS FLITCTI                 
Sbjct: 11  MNPWEQHSGVIKLPRYDYNSPSSLLFSSLLRNSHSDFLITCTISSVNSLTSLHSHSSPSN 70

Query: 91  ----------KSATKEALSILEKFVGAFNAGGFECSKNPGEY-SSFKRMRVDTQDIGGEC 139
                      SATKEA+SIL KFV       ++ S NP E  +S K+ ++ TQD   EC
Sbjct: 71  LPFHFFNSSFHSATKEAISILHKFVA------YDSSNNPKEEGTSSKKRKLCTQDTADEC 124

Query: 140 LDVKETESVTDNSGDGKV-------------LSPAKAEAEDKDGVTDLSLVKLTRNGLLL 186
            D K+TES + NS +  +             ++  KAE E KDGV  LSLVKLTRNGLLL
Sbjct: 125 FDHKDTESASANSAEDGIHFFFADYTMSMILMAGVKAEGE-KDGVACLSLVKLTRNGLLL 183

Query: 187 FIYPNNMFPDTVNIVSNIIQSLESGSTSLPVWCHRIFPIQATCRLNEK 234
             +P+N  P+TVNIVSNIIQ+LESG+ +LPVWC   FP  +  +   K
Sbjct: 184 LNFPSNTPPNTVNIVSNIIQALESGTVTLPVWCQSHFPYPSYLQFERK 231