Miyakogusa Predicted Gene

Lj5g3v2240910.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj5g3v2240910.1 Non Chatacterized Hit- tr|D7TXX5|D7TXX5_VITVI
Putative uncharacterized protein OS=Vitis vinifera
GN=,92.81,0,Radical_SAM,Radical SAM; Elongator protein 3, MiaB family,
Radical SA,Elongator protein 3/MiaB/NifB;,CUFF.57005.1
         (340 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma20g24430.1                                                       625   e-179
Glyma10g42600.1                                                       525   e-149
Glyma12g32890.1                                                       357   1e-98
Glyma13g37570.1                                                       357   1e-98

>Glyma20g24430.1 
          Length = 364

 Score =  625 bits (1612), Expect = e-179,   Method: Compositional matrix adjust.
 Identities = 303/346 (87%), Positives = 316/346 (91%), Gaps = 7/346 (2%)

Query: 1   MIQQSLFNPPSIPFSTTTTKRSRFHHPPSASAKLTTTTESEQQK------SGLGPYTGRD 54
           MI+QSL+ PPSI FST + KR RF  PPS   +   ++ S +QK       GLGP+TGRD
Sbjct: 1   MIRQSLYTPPSITFSTPSPKRHRFA-PPSWRIRCDASSVSVEQKVVGPYPGGLGPHTGRD 59

Query: 55  PNVKKPEWLRQKAPQGERFQQIKDSLSHLKLNTVCEEAQCPNIGECWNGGGDGIATATIM 114
           PN KKPEWLRQKAPQGERFQ+IK+SLSHLKLNTVCEEAQCPNIGECWNGGGDGIATATIM
Sbjct: 60  PNAKKPEWLRQKAPQGERFQEIKESLSHLKLNTVCEEAQCPNIGECWNGGGDGIATATIM 119

Query: 115 LLGDTCTRGCRFCAVKTSRNPAPPDPMEPENTANAIASWDVDYIVLTSVDRDDIPDGGSG 174
           LLGDTCTRGCRFCAVKTSRNP P DPMEPENTA AIASW VDYIVLTSVDRDD+PDGGSG
Sbjct: 120 LLGDTCTRGCRFCAVKTSRNPPPADPMEPENTAKAIASWGVDYIVLTSVDRDDLPDGGSG 179

Query: 175 HFAQTVKAMKNLKPEIMVECLTSDFRGDLTAVETLVHSGLDVFAHNVETVKRLQRIVRDP 234
           HFAQTVKAMKNLKPEIMVECLTSDFRGDL AVETLVHSGLDVFAHN+ETVKRLQRIVRDP
Sbjct: 180 HFAQTVKAMKNLKPEIMVECLTSDFRGDLKAVETLVHSGLDVFAHNIETVKRLQRIVRDP 239

Query: 235 RAGYEQSLSVLKHAKHSKEGMITKTSIMLGLGESDDELKEVMADLRAIDVDILTLGQYLQ 294
           RAGYEQSLSVLKHAKHSKEGMITKTSIMLGLGESDDE+KE MADLRAIDVDILTLGQYLQ
Sbjct: 240 RAGYEQSLSVLKHAKHSKEGMITKTSIMLGLGESDDEVKEAMADLRAIDVDILTLGQYLQ 299

Query: 295 PTPLHLTVKEYVTPEKFAFWKEYGESIGFRYVASGPLVRSSYRAGE 340
           PTPLHLTVKEYVTPEKF FWKEYGESIGFRYVASGPLVRSSYRAGE
Sbjct: 300 PTPLHLTVKEYVTPEKFDFWKEYGESIGFRYVASGPLVRSSYRAGE 345


>Glyma10g42600.1 
          Length = 380

 Score =  525 bits (1353), Expect = e-149,   Method: Compositional matrix adjust.
 Identities = 264/313 (84%), Positives = 275/313 (87%), Gaps = 26/313 (8%)

Query: 47  LGPYTGRDPNVKKPEWLRQKAPQGERFQQIKDSLSHLKLNTVCEEAQCPNIGECWNGGGD 106
           +GP+TGRDPNVKKPEWLRQKAPQGERFQ+IK+SLSHLKLNTVCEEAQCPNIGECWNGGGD
Sbjct: 50  VGPHTGRDPNVKKPEWLRQKAPQGERFQEIKESLSHLKLNTVCEEAQCPNIGECWNGGGD 109

Query: 107 GIATATIMLLGDTCTRGCRFCAVKTSRNPAPPDPMEPENTANAIASWDVD---------- 156
           GIATATIM+LGDTCTRGCRFCAVKTSRNP PPDPMEP NTA AIASW             
Sbjct: 110 GIATATIMVLGDTCTRGCRFCAVKTSRNPPPPDPMEPINTAKAIASWGAQDVVPFKLHIR 169

Query: 157 ----------------YIVLTSVDRDDIPDGGSGHFAQTVKAMKNLKPEIMVECLTSDFR 200
                           YIVLTSVDRDD+PDGGSGHFAQTVKAMKNLKPEIMVECLTSDFR
Sbjct: 170 TLGSNEFLPESFQGCGYIVLTSVDRDDLPDGGSGHFAQTVKAMKNLKPEIMVECLTSDFR 229

Query: 201 GDLTAVETLVHSGLDVFAHNVETVKRLQRIVRDPRAGYEQSLSVLKHAKHSKEGMITKTS 260
           GDL AVE LVHSGLDVFAHN+ETVKRLQRIVRDPRAGYEQSLSVLKHAKHSKEG+ITKTS
Sbjct: 230 GDLKAVEILVHSGLDVFAHNIETVKRLQRIVRDPRAGYEQSLSVLKHAKHSKEGLITKTS 289

Query: 261 IMLGLGESDDELKEVMADLRAIDVDILTLGQYLQPTPLHLTVKEYVTPEKFAFWKEYGES 320
           IMLGLGE+DDE+KE MADLRAIDVDI+T GQYLQPTPLHLTVKEYVTPEKFAFWKEYGES
Sbjct: 290 IMLGLGETDDEVKEAMADLRAIDVDIVTFGQYLQPTPLHLTVKEYVTPEKFAFWKEYGES 349

Query: 321 IGFRYVASGPLVR 333
           IGF YVASGPL R
Sbjct: 350 IGFCYVASGPLKR 362


>Glyma12g32890.1 
          Length = 382

 Score =  357 bits (916), Expect = 1e-98,   Method: Compositional matrix adjust.
 Identities = 171/280 (61%), Positives = 217/280 (77%), Gaps = 1/280 (0%)

Query: 62  WLRQKAPQGERFQQIKDSLSHLKLNTVCEEAQCPNIGECWNGGGDGIATATIMLLGDTCT 121
           W+++  P GE++ QIK  L  LKL+TVCEEA+CPN+GECW+GG  G ATATIM+LGDTCT
Sbjct: 82  WMKEAVPGGEKYVQIKKKLRELKLHTVCEEARCPNLGECWSGGETGTATATIMILGDTCT 141

Query: 122 RGCRFCAVKTSRNPAPPDPMEPENTANAIASWDVDYIVLTSVDRDDIPDGGSGHFAQTVK 181
           RGCRFC VKTSR P PPDP EP N A AIASW +DY+V+TSVDRDD+PD GSGHF +TV+
Sbjct: 142 RGCRFCNVKTSRTPPPPDPDEPTNVAEAIASWGLDYVVITSVDRDDLPDQGSGHFTETVQ 201

Query: 182 AMKNLKPEIMVECLTSDFRGDLTAVETLVHSGLDVFAHNVETVKRLQRIVRDPRAGYEQS 241
            +K LKP +++E L  DFRGD   VE +  SGLDVFAHN+ETV+ LQ +VRD RA ++QS
Sbjct: 202 KLKALKPNMLIEALVPDFRGDADCVEKVAKSGLDVFAHNIETVEELQSVVRDHRANFKQS 261

Query: 242 LSVLKHAK-HSKEGMITKTSIMLGLGESDDELKEVMADLRAIDVDILTLGQYLQPTPLHL 300
           L VL  AK ++  G +TKTSIMLG GE+ D++ + M  +RA  VD++T GQY++P+  H+
Sbjct: 262 LDVLMMAKENAPAGTLTKTSIMLGCGETPDQVVKTMEKVRAAGVDVMTFGQYMRPSKRHM 321

Query: 301 TVKEYVTPEKFAFWKEYGESIGFRYVASGPLVRSSYRAGE 340
            V EYVTPE F  +++ G  +GFRYVASGP+VRSSY+AGE
Sbjct: 322 PVSEYVTPEAFDKYQKLGMEMGFRYVASGPMVRSSYKAGE 361


>Glyma13g37570.1 
          Length = 378

 Score =  357 bits (915), Expect = 1e-98,   Method: Compositional matrix adjust.
 Identities = 171/280 (61%), Positives = 217/280 (77%), Gaps = 1/280 (0%)

Query: 62  WLRQKAPQGERFQQIKDSLSHLKLNTVCEEAQCPNIGECWNGGGDGIATATIMLLGDTCT 121
           W+++  P GE++ QIK  L  LKL+TVCEEA+CPN+GECW+GG  G ATATIM+LGDTCT
Sbjct: 82  WMKEAVPGGEKYVQIKKKLRELKLHTVCEEAKCPNLGECWSGGETGTATATIMILGDTCT 141

Query: 122 RGCRFCAVKTSRNPAPPDPMEPENTANAIASWDVDYIVLTSVDRDDIPDGGSGHFAQTVK 181
           RGCRFC VKTSR P PPDP EP N A AIASW +DY+V+TSVDRDD+PD GSGHF++TV+
Sbjct: 142 RGCRFCNVKTSRTPPPPDPDEPTNVAEAIASWGLDYVVITSVDRDDLPDQGSGHFSETVQ 201

Query: 182 AMKNLKPEIMVECLTSDFRGDLTAVETLVHSGLDVFAHNVETVKRLQRIVRDPRAGYEQS 241
            +K LKP +++E L  DFRGD   VE +  SGLDVFAHN+ETV+ LQ  VRD RA ++QS
Sbjct: 202 KLKALKPNMLIEALVPDFRGDADCVEKVAKSGLDVFAHNIETVEELQNFVRDHRANFKQS 261

Query: 242 LSVLKHAK-HSKEGMITKTSIMLGLGESDDELKEVMADLRAIDVDILTLGQYLQPTPLHL 300
           L VL  AK ++  G +TKTSIMLG GE+ D++ + M  +RA  VD++T GQY++P+  H+
Sbjct: 262 LDVLMMAKEYAPAGTLTKTSIMLGCGETPDQVVKTMEKVRAAGVDVMTFGQYMRPSKRHM 321

Query: 301 TVKEYVTPEKFAFWKEYGESIGFRYVASGPLVRSSYRAGE 340
            V EYVTPE F  +++ G  +GFRYVASGP+VRSSY+AGE
Sbjct: 322 PVSEYVTPEAFDKYQKLGMEMGFRYVASGPMVRSSYKAGE 361