Miyakogusa Predicted Gene

Lj5g3v2240800.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj5g3v2240800.1 Non Chatacterized Hit- tr|I3SIZ4|I3SIZ4_MEDTR
Uncharacterized protein OS=Medicago truncatula PE=2
SV,51.76,0.000000001,seg,NULL,CUFF.56998.1
         (87 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma20g24580.1                                                        55   1e-08

>Glyma20g24580.1 
          Length = 127

 Score = 55.5 bits (132), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 34/94 (36%), Positives = 47/94 (50%), Gaps = 8/94 (8%)

Query: 1  MGFRVLAFSFLMIFVYFSEPASSHPNQKTLPSEFMQRRQLEDEAIYGRKLEXXXXXXXXX 60
          MGFRVL  S L+IF+Y    A ++P Q  L SEF+Q  + ED+ IY  K+E         
Sbjct: 1  MGFRVLGVS-LLIFIYLINLAPAYPLQNKLFSEFVQNSKYEDKGIYESKIEGGAGHGGSS 59

Query: 61 XXXXXXXX-------XXVMPIYAAGAAKQHQSHR 87
                           V+P+YAAGAA ++  H+
Sbjct: 60 HGNGNSRSPETRGGGAAVIPVYAAGAANKNHQHQ 93