Miyakogusa Predicted Gene

Lj5g3v2240790.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj5g3v2240790.1 tr|I1LF09|I1LF09_SOYBN Ribonuclease OS=Glycine
max GN=Gma.22030 PE=3 SV=1,84.62,0,no description,NULL; no
description,Ribonuclease HII, helix-loop-helix cap domain;
RIBONUCLEASE H2 S,CUFF.56989.1
         (206 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma10g42510.2                                                       366   e-102
Glyma10g42510.1                                                       365   e-101
Glyma07g21040.1                                                       160   6e-40
Glyma20g24570.1                                                       141   5e-34
Glyma09g14580.1                                                        71   6e-13

>Glyma10g42510.2 
          Length = 268

 Score =  366 bits (940), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 177/208 (85%), Positives = 192/208 (92%), Gaps = 2/208 (0%)

Query: 1   MLKKNKINLNEISHDSAMGLVDRVLKMGVLLTEVYIDTVGDPGKYEVKLSKNFPSIKFVV 60
           MLKKNKINLNEISH SAMGL+DRVLKMGVLLTEVYIDTVGD GKYE+KLS +FPSIKFVV
Sbjct: 61  MLKKNKINLNEISHSSAMGLIDRVLKMGVLLTEVYIDTVGDAGKYEMKLSNSFPSIKFVV 120

Query: 61  AKKADSLYPVVSGASIVAKVTRDQAIRQWVLEETAENMHRNFGSGYPGDPTTKSWLEHHK 120
           AKKADSLYPVVSGASIVAKVTRD+A+R+WVL+ETAENM RNFGSGYPGDP TKSWLE HK
Sbjct: 121 AKKADSLYPVVSGASIVAKVTRDRALREWVLDETAENMQRNFGSGYPGDPQTKSWLEDHK 180

Query: 121 NSVFGFPTLVRFSWGTCTTYFKDGAEVLWEADK-DEDEGGNNNSR-KRQLKLSNVGFTTS 178
           + +FGFP+LVRFSWGTC +YFKD AEVLWE+D  DED GG+NN   KRQLKLSNVGFTTS
Sbjct: 181 HHIFGFPSLVRFSWGTCNSYFKDAAEVLWESDNLDEDGGGSNNKNGKRQLKLSNVGFTTS 240

Query: 179 KRSEEIESSGKGRSRFFQARKLEHLSHF 206
           KRSEEIESSGKGR RFFQARKLEHL++F
Sbjct: 241 KRSEEIESSGKGRCRFFQARKLEHLTYF 268


>Glyma10g42510.1 
          Length = 297

 Score =  365 bits (938), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 177/208 (85%), Positives = 192/208 (92%), Gaps = 2/208 (0%)

Query: 1   MLKKNKINLNEISHDSAMGLVDRVLKMGVLLTEVYIDTVGDPGKYEVKLSKNFPSIKFVV 60
           MLKKNKINLNEISH SAMGL+DRVLKMGVLLTEVYIDTVGD GKYE+KLS +FPSIKFVV
Sbjct: 90  MLKKNKINLNEISHSSAMGLIDRVLKMGVLLTEVYIDTVGDAGKYEMKLSNSFPSIKFVV 149

Query: 61  AKKADSLYPVVSGASIVAKVTRDQAIRQWVLEETAENMHRNFGSGYPGDPTTKSWLEHHK 120
           AKKADSLYPVVSGASIVAKVTRD+A+R+WVL+ETAENM RNFGSGYPGDP TKSWLE HK
Sbjct: 150 AKKADSLYPVVSGASIVAKVTRDRALREWVLDETAENMQRNFGSGYPGDPQTKSWLEDHK 209

Query: 121 NSVFGFPTLVRFSWGTCTTYFKDGAEVLWEADK-DEDEGGNNNSR-KRQLKLSNVGFTTS 178
           + +FGFP+LVRFSWGTC +YFKD AEVLWE+D  DED GG+NN   KRQLKLSNVGFTTS
Sbjct: 210 HHIFGFPSLVRFSWGTCNSYFKDAAEVLWESDNLDEDGGGSNNKNGKRQLKLSNVGFTTS 269

Query: 179 KRSEEIESSGKGRSRFFQARKLEHLSHF 206
           KRSEEIESSGKGR RFFQARKLEHL++F
Sbjct: 270 KRSEEIESSGKGRCRFFQARKLEHLTYF 297


>Glyma07g21040.1 
          Length = 224

 Score =  160 bits (406), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 98/229 (42%), Positives = 118/229 (51%), Gaps = 58/229 (25%)

Query: 1   MLKKNKINLNEISHDSAMGLVDRVLKMGVLLTEVY------------------------- 35
           MLKKNKINLNEI H SAM L+D+VLKM VLLTEVY                         
Sbjct: 1   MLKKNKINLNEILHSSAMSLIDKVLKMEVLLTEVYYKVSAYGTFLFMIFTFNKSSVINFF 60

Query: 36  -----------------IDTVGDPGKYEVKLSKNFPSIKFVVAKKADSLYPVVSGASIVA 78
                             DT GD  KYE+KL  +FPSIKF          P+VSGASIVA
Sbjct: 61  PWTLSGISTKREWVKPCCDTFGDARKYEIKLPNSFPSIKF----------PIVSGASIVA 110

Query: 79  KVTRDQAIRQWVLEETAENMHRNFGSGYPGDPTTKSWLEHHKNSVFGFPTLVRFSWGTCT 138
           KVTRD A+R+WVL+ET ENM R FG  Y GDP TKSWLE HK+ +FGFP+L+        
Sbjct: 111 KVTRDHALREWVLDETVENMQRFFGFAYLGDPQTKSWLEDHKHHIFGFPSLMLQKCCGKL 170

Query: 139 TYFKDGAEVLWEADKDEDEGGNNNSRKRQLKLSNVGFTTSKRSEEIESS 187
            +   G      A   + +  + N ++ Q  + +      KR EE E S
Sbjct: 171 AFLSSGKICDCRAHDSQCKKSHRNFKRIQFLIED------KRLEEGEVS 213


>Glyma20g24570.1 
          Length = 227

 Score =  141 bits (356), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 91/180 (50%), Positives = 106/180 (58%), Gaps = 31/180 (17%)

Query: 40  GDPGKYEVKLSKNFPSIKFVVAKKADSLYPVVSGASIVAKVTRDQAIR-----QWVLE-E 93
           GD GKYE+KLS + PSIKFVVAKKADSLYP+VSGASIVAK      +R     + + + +
Sbjct: 46  GDAGKYEMKLSNSSPSIKFVVAKKADSLYPIVSGASIVAKSYTGCLMRLLKTCRGIFDLD 105

Query: 94  TAENMHRNFGSGYP-------GDPTTKSWLEHHKNSVFGFPTLVRFSWGTCTTYFKDGAE 146
             E  H               G     S    H + + G P              KD AE
Sbjct: 106 ILEVRHVILSHAISPNQVLARGSQNIISLDFQHWSDLVGEPA-------------KDAAE 152

Query: 147 VLWEADK-DEDEGGNNNSRKRQLKLSNVGFTTSKRSEEIESSGKGRSRFFQARKLEHLSH 205
           VLWE+D  DED GG+NN  +    LSNVGFTTSKRSEEIESSGKGR RFFQARKLEHL++
Sbjct: 153 VLWESDNLDEDGGGSNNKNR----LSNVGFTTSKRSEEIESSGKGRCRFFQARKLEHLTY 208


>Glyma09g14580.1 
          Length = 46

 Score = 71.2 bits (173), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 35/46 (76%), Positives = 40/46 (86%)

Query: 34 VYIDTVGDPGKYEVKLSKNFPSIKFVVAKKADSLYPVVSGASIVAK 79
          VYID VGD  KYE+KLS +FPSIKFVVAKK +SLY +VSGA+IVAK
Sbjct: 1  VYIDIVGDARKYEMKLSNSFPSIKFVVAKKVNSLYSIVSGANIVAK 46