Miyakogusa Predicted Gene

Lj5g3v2237590.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj5g3v2237590.1 Non Chatacterized Hit- tr|C6TBX7|C6TBX7_SOYBN
Putative uncharacterized protein OS=Glycine max PE=4
S,73.13,4e-19,Q9SXG0_ORYSA_Q9SXG0;,NULL; coiled-coil,NULL,CUFF.56982.1
         (66 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma20g24510.1                                                        99   7e-22
Glyma10g42460.1                                                        99   1e-21

>Glyma20g24510.1 
          Length = 88

 Score = 99.4 bits (246), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 51/69 (73%), Positives = 59/69 (85%), Gaps = 3/69 (4%)

Query: 1  MDSTSRGAFTRCFSDKGKILSEEEQAKENVYIQKWERERLEKQKQQADKARAEKDKD--- 57
          MDST+RGA +R  SDKG+ILSEEEQAKENVYIQKWERERLEKQKQ ++KA+A  DKD   
Sbjct: 17 MDSTNRGALSRFLSDKGRILSEEEQAKENVYIQKWERERLEKQKQLSEKAKALTDKDASA 76

Query: 58 SANKKPGGA 66
          +A+KKP GA
Sbjct: 77 AAHKKPEGA 85


>Glyma10g42460.1 
          Length = 141

 Score = 99.0 bits (245), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 48/62 (77%), Positives = 56/62 (90%)

Query: 1  MDSTSRGAFTRCFSDKGKILSEEEQAKENVYIQKWERERLEKQKQQADKARAEKDKDSAN 60
          MDS +RGAF+R FSDKG++LSEEEQAKENVYIQKWERERLEKQKQQA+K +A+K KD+A 
Sbjct: 16 MDSANRGAFSRFFSDKGRVLSEEEQAKENVYIQKWERERLEKQKQQAEKTKADKGKDAAA 75

Query: 61 KK 62
           K
Sbjct: 76 DK 77