Miyakogusa Predicted Gene

Lj5g3v2193940.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj5g3v2193940.1 Non Chatacterized Hit- tr|I1MB48|I1MB48_SOYBN
Uncharacterized protein OS=Glycine max PE=4 SV=1,73.68,0.00000004,
,CUFF.56919.1
         (50 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma14g36580.1                                                        62   1e-10
Glyma02g38500.2                                                        62   1e-10
Glyma02g38500.1                                                        62   1e-10
Glyma04g40290.1                                                        52   2e-07
Glyma06g14500.1                                                        50   5e-07

>Glyma14g36580.1 
          Length = 479

 Score = 62.4 bits (150), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 28/38 (73%), Positives = 31/38 (81%), Gaps = 3/38 (7%)

Query: 1  MEGGGRRFTVSPRPCCGRRVVGKKRLQRGGVVDGFVTN 38
          MEGGGRR TVSPRPCCGRRVV KKR +   +VDGFV +
Sbjct: 1  MEGGGRRITVSPRPCCGRRVVAKKRPR---LVDGFVNS 35


>Glyma02g38500.2 
          Length = 479

 Score = 62.4 bits (150), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 28/38 (73%), Positives = 31/38 (81%), Gaps = 3/38 (7%)

Query: 1  MEGGGRRFTVSPRPCCGRRVVGKKRLQRGGVVDGFVTN 38
          MEGGGRR TVSPRPCCGRRVV KKR +   +VDGFV +
Sbjct: 1  MEGGGRRITVSPRPCCGRRVVAKKRPR---LVDGFVNS 35


>Glyma02g38500.1 
          Length = 480

 Score = 62.4 bits (150), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 28/38 (73%), Positives = 31/38 (81%), Gaps = 3/38 (7%)

Query: 1  MEGGGRRFTVSPRPCCGRRVVGKKRLQRGGVVDGFVTN 38
          MEGGGRR TVSPRPCCGRRVV KKR +   +VDGFV +
Sbjct: 1  MEGGGRRITVSPRPCCGRRVVAKKRPR---LVDGFVNS 35


>Glyma04g40290.1 
          Length = 480

 Score = 51.6 bits (122), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 22/35 (62%), Positives = 25/35 (71%), Gaps = 2/35 (5%)

Query: 4  GGRRFTVSPRPCCGRRVVGKKRLQRGGVVDGFVTN 38
          GGRR TVSPRPCCGRR+V  K+  R    DGFV +
Sbjct: 3  GGRRITVSPRPCCGRRIVAAKKRPRAN--DGFVNS 35


>Glyma06g14500.1 
          Length = 478

 Score = 50.1 bits (118), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 21/35 (60%), Positives = 25/35 (71%), Gaps = 2/35 (5%)

Query: 4  GGRRFTVSPRPCCGRRVVGKKRLQRGGVVDGFVTN 38
          GG+R TVSPRPCCGRR+V  K+  R    DGFV +
Sbjct: 3  GGKRITVSPRPCCGRRIVAAKKRPRAN--DGFVNS 35