Miyakogusa Predicted Gene

Lj5g3v2183890.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj5g3v2183890.1 Non Chatacterized Hit- tr|I3S518|I3S518_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=2 SV=1,100,0,Ribosomal
proteins L15p and L18e,Ribosomal protein L18e/L15P; rplO_bact:
ribosomal protein L15,Ribos,CUFF.56936.1
         (207 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma20g24990.1                                                       253   1e-67
Glyma20g24990.2                                                       208   4e-54
Glyma10g42030.1                                                       159   2e-39

>Glyma20g24990.1 
          Length = 256

 Score =  253 bits (645), Expect = 1e-67,   Method: Compositional matrix adjust.
 Identities = 136/189 (71%), Positives = 144/189 (76%), Gaps = 2/189 (1%)

Query: 21  FKGTLKTLEARPCLK-IQRPRPRXXXXXXXXXXXXXXXXXXX-XRFRLDNLGPQPXXXXX 78
           FKGT+KTL A+P LK IQ+ RP                      RFRLDNLGPQP     
Sbjct: 20  FKGTVKTLVAKPWLKKIQQARPLISVVNKAASLSSPVTAPSVGVRFRLDNLGPQPGSRKR 79

Query: 79  XXXXXXXXXXXQGASCGFGMRGQKSRSGPGVRRGFEGGQMPLYRRIPKLRGIAGGMSAGL 138
                      QGASCGFGMRGQKSRSGPGVR+GFEGGQMPLYRRIPKLRGIAGGM AGL
Sbjct: 80  AKRKGRGISAGQGASCGFGMRGQKSRSGPGVRKGFEGGQMPLYRRIPKLRGIAGGMHAGL 139

Query: 139 PKYVHVNLRDIEGAKFQDGDEVSLESLKEKGVINPSGRERRLPLKILGEGELSKKLTVKA 198
           PKYVHVNLRDIE AKF++G+EVSLESLK KGVINPSGRERRLPLKILGEGELSKKLT+KA
Sbjct: 140 PKYVHVNLRDIEDAKFKEGEEVSLESLKAKGVINPSGRERRLPLKILGEGELSKKLTLKA 199

Query: 199 RAFSTSAKE 207
           RAFSTSAKE
Sbjct: 200 RAFSTSAKE 208


>Glyma20g24990.2 
          Length = 189

 Score =  208 bits (529), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 113/165 (68%), Positives = 120/165 (72%), Gaps = 2/165 (1%)

Query: 21  FKGTLKTLEARPCLK-IQRPRPRXXXXXXXXXXXXXXXXXXX-XRFRLDNLGPQPXXXXX 78
           FKGT+KTL A+P LK IQ+ RP                      RFRLDNLGPQP     
Sbjct: 20  FKGTVKTLVAKPWLKKIQQARPLISVVNKAASLSSPVTAPSVGVRFRLDNLGPQPGSRKR 79

Query: 79  XXXXXXXXXXXQGASCGFGMRGQKSRSGPGVRRGFEGGQMPLYRRIPKLRGIAGGMSAGL 138
                      QGASCGFGMRGQKSRSGPGVR+GFEGGQMPLYRRIPKLRGIAGGM AGL
Sbjct: 80  AKRKGRGISAGQGASCGFGMRGQKSRSGPGVRKGFEGGQMPLYRRIPKLRGIAGGMHAGL 139

Query: 139 PKYVHVNLRDIEGAKFQDGDEVSLESLKEKGVINPSGRERRLPLK 183
           PKYVHVNLRDIE AKF++G+EVSLESLK KGVINPSGRERRLPLK
Sbjct: 140 PKYVHVNLRDIEDAKFKEGEEVSLESLKAKGVINPSGRERRLPLK 184


>Glyma10g42030.1 
          Length = 163

 Score =  159 bits (401), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 93/139 (66%), Positives = 99/139 (71%), Gaps = 21/139 (15%)

Query: 90  QGASCGFGMRGQKSRSGPGVRRGFEGGQMPLYRRIPKLRGIAGGMSAGL-----PKYVHV 144
           QGASCGFGMRGQKSRSGP V  GFEGGQMPLYRRIPKLRGIAG +   L      +Y   
Sbjct: 7   QGASCGFGMRGQKSRSGPAVTIGFEGGQMPLYRRIPKLRGIAGEIPLHLLLDRLIQYFSF 66

Query: 145 NLRD----------------IEGAKFQDGDEVSLESLKEKGVINPSGRERRLPLKILGEG 188
             R                  E AKF++G+EVSLE LK KGVIN SGRERRLPLKILGEG
Sbjct: 67  ASRGSQLIPFSGRPLFPPSPTEDAKFKEGEEVSLEFLKAKGVINTSGRERRLPLKILGEG 126

Query: 189 ELSKKLTVKARAFSTSAKE 207
           ELSKKLT+KARAFSTSAKE
Sbjct: 127 ELSKKLTLKARAFSTSAKE 145