Miyakogusa Predicted Gene

Lj5g3v2183640.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj5g3v2183640.1 tr|G7J5Q6|G7J5Q6_MEDTR Serpin OS=Medicago
truncatula GN=MTR_3g100990 PE=3
SV=1,47.13,0.000000000005,Serpins,Serpin domain; seg,NULL; no
description,NULL; Serpin,Serpin domain; SERine  Proteinase
INhib,gene.g63214.t1.1
         (265 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma04g03860.1                                                       238   4e-63
Glyma06g03960.1                                                       234   5e-62

>Glyma04g03860.1 
          Length = 389

 Score =  238 bits (608), Expect = 4e-63,   Method: Compositional matrix adjust.
 Identities = 129/232 (55%), Positives = 160/232 (68%), Gaps = 12/232 (5%)

Query: 1   MTAGADGRTLDELLSFLRFDSVDHLTTFFSQVLSPVLFSD------DHLSFANGMWVDQS 54
           + +G+ G TLD+LLSFLR  S DHL +F SQ+++ VL SD        LSFA+G+WV+QS
Sbjct: 45  IASGSKGPTLDQLLSFLRSKSTDHLNSFASQLVAVVL-SDAAPAGGPRLSFADGVWVEQS 103

Query: 55  VSLSHSFKQLVATHYKATLASLDFQTQGNQVQSEVNSWIKKVTNGLITQLLPPGTVTNLT 114
           +SL  SFKQLV+  YKATLAS+DFQT+  +V +EVNSW +K TNGL+  LLPPG+V N T
Sbjct: 104 LSLHPSFKQLVSAQYKATLASVDFQTKAVEVTNEVNSWAEKETNGLVKDLLPPGSVDNST 163

Query: 115 RLIFANALHFKGTWKHKFDGP-TLERSFHLLNGTTVNVPFMTMTSKNKLQFIRVFHGFKI 173
           RLIFANAL+FKG W  KFD   T +  FHLLNG++V VPF  MTSK K QFI  F  FK+
Sbjct: 164 RLIFANALYFKGAWNEKFDASITKDYDFHLLNGSSVKVPF--MTSKKK-QFIMAFDSFKV 220

Query: 174 LRLSYKQGRDKKRRFSMYIFLPDARRGXXXXXXXXXXXXAFFEAKLPRRKVQ 225
           L L YKQG D KR+F+MY FLP+ + G             F E KLP +KV+
Sbjct: 221 LGLPYKQGED-KRQFTMYFFLPETKDGLLALAEKLASESGFLERKLPNQKVE 271


>Glyma06g03960.1 
          Length = 389

 Score =  234 bits (598), Expect = 5e-62,   Method: Compositional matrix adjust.
 Identities = 127/232 (54%), Positives = 159/232 (68%), Gaps = 12/232 (5%)

Query: 1   MTAGADGRTLDELLSFLRFDSVDHLTTFFSQVLSPVLFSD------DHLSFANGMWVDQS 54
           + AG+ G TLD+LLSFLR  S DHL +F SQ+ + VL SD        LSFA+G+WV+QS
Sbjct: 45  IAAGSKGPTLDQLLSFLRSKSTDHLNSFASQLFAVVL-SDASPAGGPRLSFADGVWVEQS 103

Query: 55  VSLSHSFKQLVATHYKATLASLDFQTQGNQVQSEVNSWIKKVTNGLITQLLPPGTVTNLT 114
           +SL  SFKQLV+  YKATLAS+DFQT+  +V +EVNSW +K TNGL+  LLPPG+V + T
Sbjct: 104 LSLLPSFKQLVSADYKATLASVDFQTKAVEVANEVNSWAEKETNGLVKDLLPPGSVDSST 163

Query: 115 RLIFANALHFKGTWKHKFDGP-TLERSFHLLNGTTVNVPFMTMTSKNKLQFIRVFHGFKI 173
           RLIFANAL+FKG W  KFD   T +  FHLL+G ++ VPFMT + KN  QFIR F GFK+
Sbjct: 164 RLIFANALYFKGAWNEKFDSSITKDYDFHLLDGRSIRVPFMT-SRKN--QFIRAFDGFKV 220

Query: 174 LRLSYKQGRDKKRRFSMYIFLPDARRGXXXXXXXXXXXXAFFEAKLPRRKVQ 225
           L L YKQG D KR+F+MY FLP+ + G             F E KLP  K++
Sbjct: 221 LGLPYKQGED-KRQFTMYFFLPETKDGLLALAEKLASESGFLERKLPNNKLE 271