Miyakogusa Predicted Gene

Lj5g3v2182440.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj5g3v2182440.1 Non Chatacterized Hit- tr|B9SLZ4|B9SLZ4_RICCO
Putative uncharacterized protein OS=Ricinus communis
G,42.14,2e-16,seg,NULL,CUFF.56953.1
         (149 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma20g25370.1                                                       119   1e-27
Glyma02g09740.1                                                        55   3e-08
Glyma18g53230.1                                                        49   2e-06

>Glyma20g25370.1 
          Length = 133

 Score =  119 bits (298), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 79/154 (51%), Positives = 86/154 (55%), Gaps = 26/154 (16%)

Query: 1   MATLQKFKLFALQCGAVQSPTRSP----MVQLPRPKTTLRALLGLSLTRPPRRREDVPSA 56
           MA LQKFKLFA  CG  QSPT+SP    +VQ  RPKTTLR+LL  SL R  RR+E+V   
Sbjct: 1   MAALQKFKLFATPCGVGQSPTQSPRTSPLVQFRRPKTTLRSLL--SLNRSLRRQENV--- 55

Query: 57  MEKEKDSQRRQKLKDLFVXXX-XXXXXXXXXATPLLGSVAAVGIGVGNSSNMGLARSGSW 115
              EK+  RR  LK LFV              TP+L SVA                  SW
Sbjct: 56  --VEKNPMRRHSLKALFVSSPPREERVHENETTPMLASVAVPH--------------SSW 99

Query: 116 RGGPGSMNPVWAGFRCRSLLKRKAWRPLLNTITE 149
              PGS NP WAGFRCRSLLKRK WRPLL TI E
Sbjct: 100 SNEPGSTNPPWAGFRCRSLLKRKHWRPLLLTIPE 133


>Glyma02g09740.1 
          Length = 153

 Score = 54.7 bits (130), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 52/160 (32%), Positives = 68/160 (42%), Gaps = 18/160 (11%)

Query: 1   MATLQKFKLFALQCGAVQSPTR----SPMVQLPRPKTTLRALLGLSLTRPPRRREDVPSA 56
           M TL KFK  A QC    SPTR    SP++ L R + TLR  L         R       
Sbjct: 1   MPTLHKFKFLATQCAVAGSPTRSPTTSPIIHL-RRRKTLRMFLARRRF----RPPPQDPP 55

Query: 57  MEKEKDSQRRQKLKDLFVXX------XXXXXXXXXXATPLLGSVAAVGIGVGNSSNMGLA 110
              + +++ R KLKDLFV                                + NS+     
Sbjct: 56  PLPDSEARVRHKLKDLFVSSPPPPPLKDEKTIFHHQQQQQQQQQDQHEEFLPNSAVSVRF 115

Query: 111 RSGS-WRGGPGSMNPVWAGFRCRSLLKRKAWRPLLNTITE 149
           R+GS +R G  ++ PV + FR R  L R+AWRP+L TI E
Sbjct: 116 RAGSPFRRGASALRPVSSVFRYR--LLRRAWRPVLVTIPE 153


>Glyma18g53230.1 
          Length = 152

 Score = 48.9 bits (115), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 52/162 (32%), Positives = 70/162 (43%), Gaps = 23/162 (14%)

Query: 1   MATLQKFKLFALQCGAVQSPTR----SPMVQLPRPKTTLRALLGLSLTRPPRRRED---V 53
           M TL KFK  A QC    SPTR    SP++ L R + TLR  L        RRR      
Sbjct: 1   MPTLHKFKFLATQCAVAGSPTRSPTTSPVIHL-RRRKTLRMFLA-------RRRFHPPPQ 52

Query: 54  PSAMEKEKDSQRRQKLKDLFVXX---XXXXXXXXXXATPLLGSVAAVGIGVGNSSNMGLA 110
                 + +++ R KLKDLF+                             + NS+     
Sbjct: 53  DPPPLPDSEARVRHKLKDLFISSPPPPPLNDEKTIFHNHQQQQEDQHEELLPNSAVSVRF 112

Query: 111 RSGS-WRGGP--GSMNPVWAGFRCRSLLKRKAWRPLLNTITE 149
           R+GS +R G    ++ PV + FR R  L R+AWRP+L +I E
Sbjct: 113 RTGSPFRRGASTAALRPVSSVFRYR--LLRRAWRPVLVSIPE 152