Miyakogusa Predicted Gene
- Lj5g3v2179870.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj5g3v2179870.1 tr|Q0WU05|Q0WU05_ARATH Auxin regulated protein
OS=Arabidopsis thaliana GN=At2g33310 PE=2
SV=1,34.81,0.00000000002,seg,NULL; IAA_ARF,Aux/IAA-ARF-dimerisation;
AUX_IAA,AUX/IAA protein,gene.g63165.t1.1
(124 letters)
Database: Glyma1.pep
75,778 sequences; 25,431,882 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Glyma10g41640.1 178 9e-46
Glyma20g25580.1 178 1e-45
Glyma13g18910.1 54 5e-08
Glyma15g01560.1 52 2e-07
Glyma13g43780.1 51 2e-07
Glyma03g38370.1 50 5e-07
Glyma17g04760.2 50 7e-07
Glyma17g04760.1 50 7e-07
Glyma19g40970.2 49 8e-07
Glyma19g40970.1 49 9e-07
Glyma13g17750.1 49 1e-06
Glyma07g03840.1 49 1e-06
Glyma20g35280.1 49 2e-06
Glyma04g07040.1 48 2e-06
Glyma08g22190.1 48 2e-06
>Glyma10g41640.1
Length = 191
Score = 178 bits (452), Expect = 9e-46, Method: Compositional matrix adjust.
Identities = 87/118 (73%), Positives = 95/118 (80%), Gaps = 4/118 (3%)
Query: 11 SVYDDDLMDWPHSDLHLKNSSTMHSRSVH----DEELEGVQSNERWAYVKVNMDGVTIGR 66
++YD+DLMDWPHS+L+LKNSSTMHSRS H DEE+EGVQSNERWAYVKVNMDGVTIGR
Sbjct: 48 NLYDEDLMDWPHSNLNLKNSSTMHSRSAHHQNFDEEIEGVQSNERWAYVKVNMDGVTIGR 107
Query: 67 KICVLDHGGYSSLAIQLEDMXXXXXXXXXXXXXXXXXYSLFYKDREDNWRHVGDVPWK 124
KICVLDHGGYSSLA+QLEDM YSLFYKDR+DNWR VGDVPWK
Sbjct: 108 KICVLDHGGYSSLALQLEDMFGSHSVSGLRLFQSGSEYSLFYKDRQDNWRPVGDVPWK 165
>Glyma20g25580.1
Length = 190
Score = 178 bits (451), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 86/117 (73%), Positives = 95/117 (81%), Gaps = 3/117 (2%)
Query: 11 SVYDDDLMDWPHSDLHLKNSSTMHSRSVH---DEELEGVQSNERWAYVKVNMDGVTIGRK 67
++YD++LMDWPHS+L+LKNS TMHSRSVH DEE+EGVQSNERWAYVKVNMDGVTIGRK
Sbjct: 48 NLYDEELMDWPHSNLNLKNSRTMHSRSVHQNFDEEIEGVQSNERWAYVKVNMDGVTIGRK 107
Query: 68 ICVLDHGGYSSLAIQLEDMXXXXXXXXXXXXXXXXXYSLFYKDREDNWRHVGDVPWK 124
ICVLDHGGYSSLA+QLEDM YSLFYKDR+DNWR VGDVPWK
Sbjct: 108 ICVLDHGGYSSLALQLEDMFGSQSVSGLRLFQSGSEYSLFYKDRQDNWRPVGDVPWK 164
>Glyma13g18910.1
Length = 291
Score = 53.5 bits (127), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 31/89 (34%), Positives = 39/89 (43%), Gaps = 19/89 (21%)
Query: 54 YVKVNMDGVTIGRKICVLDHGGYSSLAIQLEDMXXXXXXXXXXXXXXXXXYS-------- 105
+VKVNMDG+ IGRK+ + H Y +LA LEDM Y
Sbjct: 167 FVKVNMDGIPIGRKVDLSAHSSYETLAQTLEDMFNESTTVTTCKGSNGEDYGIIIGGERH 226
Query: 106 -----------LFYKDREDNWRHVGDVPW 123
L Y+D+E +W VGDVPW
Sbjct: 227 SKLLDGSSKFVLTYEDKEGDWMLVGDVPW 255
>Glyma15g01560.1
Length = 187
Score = 51.6 bits (122), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 37/76 (48%)
Query: 49 NERWAYVKVNMDGVTIGRKICVLDHGGYSSLAIQLEDMXXXXXXXXXXXXXXXXXYSLFY 108
NE YVKV+MDG RKI + H GYS LA+ LE Y
Sbjct: 75 NETKMYVKVSMDGAPFLRKIDLAMHKGYSELALALEKFFGCYGIGSALKDEENVEQVPIY 134
Query: 109 KDREDNWRHVGDVPWK 124
+D++ +W VGDVPW+
Sbjct: 135 EDKDGDWMLVGDVPWE 150
>Glyma13g43780.1
Length = 189
Score = 51.2 bits (121), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 37/76 (48%)
Query: 49 NERWAYVKVNMDGVTIGRKICVLDHGGYSSLAIQLEDMXXXXXXXXXXXXXXXXXYSLFY 108
NE YVKV+MDG RKI + H GYS L + LE + Y
Sbjct: 77 NETKMYVKVSMDGAPFLRKIDLAMHKGYSELVLALEKFFGCYGIREALKDAENAEHVPIY 136
Query: 109 KDREDNWRHVGDVPWK 124
+D++ +W VGDVPW+
Sbjct: 137 EDKDGDWMLVGDVPWE 152
>Glyma03g38370.1
Length = 180
Score = 50.1 bits (118), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 45/93 (48%), Gaps = 2/93 (2%)
Query: 34 HSRSVHDEELEGVQSNERWAYVKVNMDGVTIGRKICVLDHGGYSSLAIQLEDMXXXXXX- 92
+S++ E+ ++ +VKV M+G+ IGRK+ +L HGGY L LE M
Sbjct: 69 YSQAAASAEVNDCSNDHSSFFVKVYMEGIPIGRKLNILAHGGYYELVRTLEHMFDTTILW 128
Query: 93 -XXXXXXXXXXXYSLFYKDREDNWRHVGDVPWK 124
+ L Y+D E + VGDVPW+
Sbjct: 129 GTEMNGVQPERCHVLTYEDEEGDLVMVGDVPWE 161
>Glyma17g04760.2
Length = 243
Score = 49.7 bits (117), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 36/120 (30%), Positives = 55/120 (45%), Gaps = 16/120 (13%)
Query: 9 LDSVYDDDLMDWPHSDLHLKNSSTMHSRSVHDEELEGVQS--NERWA-YVKVNMDGVTIG 65
+S ++ DWP +S+ L G QS ++R + +VKV M+G+ IG
Sbjct: 136 FNSTRREESFDWPPI------------KSILRSTLVGKQSYLSQRPSLFVKVYMEGIPIG 183
Query: 66 RKICVLDHGGYSSLAIQLEDMXXXXXXXXXXXXXXXXXY-SLFYKDREDNWRHVGDVPWK 124
RK+ ++ H GY L L M + L Y+D+E +W VGDVPW+
Sbjct: 184 RKLNLMAHYGYDGLVKTLGHMFRTNILCPNSQPLNSGNFHVLTYEDQEGDWMMVGDVPWE 243
>Glyma17g04760.1
Length = 260
Score = 49.7 bits (117), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 36/120 (30%), Positives = 55/120 (45%), Gaps = 16/120 (13%)
Query: 9 LDSVYDDDLMDWPHSDLHLKNSSTMHSRSVHDEELEGVQS--NERWA-YVKVNMDGVTIG 65
+S ++ DWP +S+ L G QS ++R + +VKV M+G+ IG
Sbjct: 136 FNSTRREESFDWPPI------------KSILRSTLVGKQSYLSQRPSLFVKVYMEGIPIG 183
Query: 66 RKICVLDHGGYSSLAIQLEDMXXXXXXXXXXXXXXXXXY-SLFYKDREDNWRHVGDVPWK 124
RK+ ++ H GY L L M + L Y+D+E +W VGDVPW+
Sbjct: 184 RKLNLMAHYGYDGLVKTLGHMFRTNILCPNSQPLNSGNFHVLTYEDQEGDWMMVGDVPWE 243
>Glyma19g40970.2
Length = 158
Score = 49.3 bits (116), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 28/73 (38%), Positives = 37/73 (50%), Gaps = 2/73 (2%)
Query: 54 YVKVNMDGVTIGRKICVLDHGGYSSLAIQLEDMXXXXXX--XXXXXXXXXXXYSLFYKDR 111
+VKV M+G+ IGRK+ +L HGGY L LE M + L Y+D
Sbjct: 86 FVKVYMEGIPIGRKLNILAHGGYYELVRTLEHMFDTTILWGTEMNGVQPERCHVLTYEDE 145
Query: 112 EDNWRHVGDVPWK 124
E + VGDVPW+
Sbjct: 146 EGDLVMVGDVPWE 158
>Glyma19g40970.1
Length = 177
Score = 49.3 bits (116), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 28/73 (38%), Positives = 37/73 (50%), Gaps = 2/73 (2%)
Query: 54 YVKVNMDGVTIGRKICVLDHGGYSSLAIQLEDMXXXXXX--XXXXXXXXXXXYSLFYKDR 111
+VKV M+G+ IGRK+ +L HGGY L LE M + L Y+D
Sbjct: 86 FVKVYMEGIPIGRKLNILAHGGYYELVRTLEHMFDTTILWGTEMNGVQPERCHVLTYEDE 145
Query: 112 EDNWRHVGDVPWK 124
E + VGDVPW+
Sbjct: 146 EGDLVMVGDVPWE 158
>Glyma13g17750.1
Length = 244
Score = 48.9 bits (115), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/120 (28%), Positives = 54/120 (45%), Gaps = 10/120 (8%)
Query: 6 KLCLDSVYDDDLMDWPHSDLHLKNSSTMHSRSVHDEELEGVQSNERWAYVKVNMDGVTIG 65
+L +S ++ DWP L+ ST+ + H + + +VKV M+G+ IG
Sbjct: 117 ELPFNSTPREESFDWPPIKSILR--STLVGKQSHLSQRPSL-------FVKVYMEGIPIG 167
Query: 66 RKICVLDHGGYSSLAIQLEDMXXXXXXXXXXXXXXXXXY-SLFYKDREDNWRHVGDVPWK 124
RK+ ++ H Y L L M + L Y+D+E +W VGDVPW+
Sbjct: 168 RKLNLMAHYSYDGLVKTLGHMFRTNILCPNSQPLNSRNFHVLTYEDQEGDWMMVGDVPWE 227
>Glyma07g03840.1
Length = 187
Score = 48.5 bits (114), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 37/71 (52%)
Query: 54 YVKVNMDGVTIGRKICVLDHGGYSSLAIQLEDMXXXXXXXXXXXXXXXXXYSLFYKDRED 113
YVKV+MDG RKI + H GYS LA+ L+ + + Y+D++
Sbjct: 80 YVKVSMDGAPFLRKIDLGLHKGYSDLALALDKLFGSYGMVEALKNADNSEHVPIYEDKDG 139
Query: 114 NWRHVGDVPWK 124
+W VGDVPW+
Sbjct: 140 DWMLVGDVPWE 150
>Glyma20g35280.1
Length = 194
Score = 48.5 bits (114), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/108 (31%), Positives = 50/108 (46%), Gaps = 15/108 (13%)
Query: 17 LMDWPHSDLHLKNSSTMHSRSVHDEELEGVQSNERWAYVKVNMDGVTIGRKICVLDHGGY 76
++ WP + KNS + + E G+ YVKV+MDG RKI + +GGY
Sbjct: 76 IVGWPPIRSYRKNS-------LQESEGAGI-------YVKVSMDGAPYLRKIDLKVYGGY 121
Query: 77 SSLAIQLEDMXXXXXXX-XXXXXXXXXXYSLFYKDREDNWRHVGDVPW 123
+ L LE+M Y+ Y+D++ +W VGDVPW
Sbjct: 122 TQLLKSLENMFKLTIGEHSEKEGYKGSDYAPTYEDKDGDWMLVGDVPW 169
>Glyma04g07040.1
Length = 226
Score = 48.1 bits (113), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/117 (27%), Positives = 50/117 (42%), Gaps = 10/117 (8%)
Query: 14 DDDLMDWP------HSDLHLKNSSTMHSRSVHDEELEGVQSNERWAYVKVNMDGVTIGRK 67
++ L+ WP +LH ++ + R+ + E YVKVNM+GV IGRK
Sbjct: 95 ENHLVGWPPVKSWRRKELHQQHPARGRIRNDRIQANENQSRGPNSLYVKVNMEGVAIGRK 154
Query: 68 ICVLDHGGYSSLAIQLEDMXXXXXXXXXXXXXXXXXYSLFYKDREDNWRHVGDVPWK 124
I + Y +L L M Y+L +++ + W VG VPW+
Sbjct: 155 INLRLFNSYQTLTSSLISM----FAKYQKFEEVGESYTLTFQNEQGEWLQVGHVPWQ 207
>Glyma08g22190.1
Length = 195
Score = 47.8 bits (112), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 37/71 (52%)
Query: 54 YVKVNMDGVTIGRKICVLDHGGYSSLAIQLEDMXXXXXXXXXXXXXXXXXYSLFYKDRED 113
YVKV+MDG RKI + H GYS LA+ L+ + + Y+D++
Sbjct: 88 YVKVSMDGAPFLRKIDLGLHKGYSDLALALDKLFGCYGMVEALKNADNSEHVPIYEDKDG 147
Query: 114 NWRHVGDVPWK 124
+W VGDVPW+
Sbjct: 148 DWMLVGDVPWE 158