Miyakogusa Predicted Gene
- Lj5g3v2179660.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj5g3v2179660.1 Non Chatacterized Hit- tr|C6T177|C6T177_SOYBN
Putative uncharacterized protein OS=Glycine max PE=2 S,66.28,7e-19,
,CUFF.56844.1
(92 letters)
Database: Glyma1.pep
75,778 sequences; 25,431,882 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Glyma10g41550.2 98 2e-21
Glyma10g41550.1 98 2e-21
Glyma20g25690.1 95 2e-20
Glyma20g25690.2 95 2e-20
>Glyma10g41550.2
Length = 173
Score = 98.2 bits (243), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 58/86 (67%), Positives = 65/86 (75%), Gaps = 4/86 (4%)
Query: 1 MMDEPEELEPLFDYSRVQPLNNFVCLDDDED-EDVTCA-AKKRKSSKPVENEKKETNVKG 58
MMDE EELEPLFDYSRVQPLN DD +D EDV C +KKRK S+ V NEK TN K
Sbjct: 1 MMDETEELEPLFDYSRVQPLNPIDLDDDLDDYEDVICVDSKKRKISQAVGNEK--TNGKR 58
Query: 59 VEVVDIEDDDWLPPPPKVVSKAQRSL 84
V VVDIEDDDWLPPPPK+ S AQ+++
Sbjct: 59 VTVVDIEDDDWLPPPPKIASNAQKTI 84
>Glyma10g41550.1
Length = 218
Score = 98.2 bits (243), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 58/86 (67%), Positives = 65/86 (75%), Gaps = 4/86 (4%)
Query: 1 MMDEPEELEPLFDYSRVQPLNNFVCLDDDED-EDVTCA-AKKRKSSKPVENEKKETNVKG 58
MMDE EELEPLFDYSRVQPLN DD +D EDV C +KKRK S+ V NEK TN K
Sbjct: 1 MMDETEELEPLFDYSRVQPLNPIDLDDDLDDYEDVICVDSKKRKISQAVGNEK--TNGKR 58
Query: 59 VEVVDIEDDDWLPPPPKVVSKAQRSL 84
V VVDIEDDDWLPPPPK+ S AQ+++
Sbjct: 59 VTVVDIEDDDWLPPPPKIASNAQKTI 84
>Glyma20g25690.1
Length = 218
Score = 95.1 bits (235), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 53/95 (55%), Positives = 62/95 (65%), Gaps = 24/95 (25%)
Query: 1 MMDEPEELEPLFDYSRVQPLN------------NFVCLDDDEDEDVTCAAKKRKSSKPVE 48
M DE EELEPLFDYSRVQPLN + +C+D +KKRK+S+ V
Sbjct: 1 MTDETEELEPLFDYSRVQPLNPIDLDDDFDDYEDVICVD----------SKKRKNSQAVG 50
Query: 49 NEKKETNVKGVEVVDIEDDDWLPPPPKVVSKAQRS 83
NEK TN KGV VVDIEDDDWLPPPPK+ S AQ++
Sbjct: 51 NEK--TNGKGVTVVDIEDDDWLPPPPKIASNAQKT 83
>Glyma20g25690.2
Length = 184
Score = 94.7 bits (234), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 56/85 (65%), Positives = 64/85 (75%), Gaps = 4/85 (4%)
Query: 1 MMDEPEELEPLFDYSRVQPLNNFVCLDDDEDED-VTCA-AKKRKSSKPVENEKKETNVKG 58
M DE EELEPLFDYSRVQPLN DD +D + V C +KKRK+S+ V NEK TN KG
Sbjct: 1 MTDETEELEPLFDYSRVQPLNPIDLDDDFDDYEDVICVDSKKRKNSQAVGNEK--TNGKG 58
Query: 59 VEVVDIEDDDWLPPPPKVVSKAQRS 83
V VVDIEDDDWLPPPPK+ S AQ++
Sbjct: 59 VTVVDIEDDDWLPPPPKIASNAQKT 83