Miyakogusa Predicted Gene

Lj5g3v2179660.1
Show Alignment: 
BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj5g3v2179660.1 Non Chatacterized Hit- tr|C6T177|C6T177_SOYBN
Putative uncharacterized protein OS=Glycine max PE=2 S,66.28,7e-19,
,CUFF.56844.1
         (92 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma10g41550.2                                                        98   2e-21
Glyma10g41550.1                                                        98   2e-21
Glyma20g25690.1                                                        95   2e-20
Glyma20g25690.2                                                        95   2e-20

>Glyma10g41550.2 
          Length = 173

 Score = 98.2 bits (243), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 58/86 (67%), Positives = 65/86 (75%), Gaps = 4/86 (4%)

Query: 1  MMDEPEELEPLFDYSRVQPLNNFVCLDDDED-EDVTCA-AKKRKSSKPVENEKKETNVKG 58
          MMDE EELEPLFDYSRVQPLN     DD +D EDV C  +KKRK S+ V NEK  TN K 
Sbjct: 1  MMDETEELEPLFDYSRVQPLNPIDLDDDLDDYEDVICVDSKKRKISQAVGNEK--TNGKR 58

Query: 59 VEVVDIEDDDWLPPPPKVVSKAQRSL 84
          V VVDIEDDDWLPPPPK+ S AQ+++
Sbjct: 59 VTVVDIEDDDWLPPPPKIASNAQKTI 84


>Glyma10g41550.1 
          Length = 218

 Score = 98.2 bits (243), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 58/86 (67%), Positives = 65/86 (75%), Gaps = 4/86 (4%)

Query: 1  MMDEPEELEPLFDYSRVQPLNNFVCLDDDED-EDVTCA-AKKRKSSKPVENEKKETNVKG 58
          MMDE EELEPLFDYSRVQPLN     DD +D EDV C  +KKRK S+ V NEK  TN K 
Sbjct: 1  MMDETEELEPLFDYSRVQPLNPIDLDDDLDDYEDVICVDSKKRKISQAVGNEK--TNGKR 58

Query: 59 VEVVDIEDDDWLPPPPKVVSKAQRSL 84
          V VVDIEDDDWLPPPPK+ S AQ+++
Sbjct: 59 VTVVDIEDDDWLPPPPKIASNAQKTI 84


>Glyma20g25690.1 
          Length = 218

 Score = 95.1 bits (235), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 53/95 (55%), Positives = 62/95 (65%), Gaps = 24/95 (25%)

Query: 1  MMDEPEELEPLFDYSRVQPLN------------NFVCLDDDEDEDVTCAAKKRKSSKPVE 48
          M DE EELEPLFDYSRVQPLN            + +C+D          +KKRK+S+ V 
Sbjct: 1  MTDETEELEPLFDYSRVQPLNPIDLDDDFDDYEDVICVD----------SKKRKNSQAVG 50

Query: 49 NEKKETNVKGVEVVDIEDDDWLPPPPKVVSKAQRS 83
          NEK  TN KGV VVDIEDDDWLPPPPK+ S AQ++
Sbjct: 51 NEK--TNGKGVTVVDIEDDDWLPPPPKIASNAQKT 83


>Glyma20g25690.2 
          Length = 184

 Score = 94.7 bits (234), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 56/85 (65%), Positives = 64/85 (75%), Gaps = 4/85 (4%)

Query: 1  MMDEPEELEPLFDYSRVQPLNNFVCLDDDEDED-VTCA-AKKRKSSKPVENEKKETNVKG 58
          M DE EELEPLFDYSRVQPLN     DD +D + V C  +KKRK+S+ V NEK  TN KG
Sbjct: 1  MTDETEELEPLFDYSRVQPLNPIDLDDDFDDYEDVICVDSKKRKNSQAVGNEK--TNGKG 58

Query: 59 VEVVDIEDDDWLPPPPKVVSKAQRS 83
          V VVDIEDDDWLPPPPK+ S AQ++
Sbjct: 59 VTVVDIEDDDWLPPPPKIASNAQKT 83