Miyakogusa Predicted Gene

Lj5g3v2146940.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj5g3v2146940.1 Non Chatacterized Hit- tr|D8UHH7|D8UHH7_VOLCA
Putative uncharacterized protein OS=Volvox carteri GN=,40.87,3e-18,
,CUFF.56829.1
         (146 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma16g06920.1                                                       247   3e-66
Glyma05g06390.1                                                       228   2e-60
Glyma19g07790.1                                                       175   2e-44

>Glyma16g06920.1 
          Length = 574

 Score =  247 bits (631), Expect = 3e-66,   Method: Compositional matrix adjust.
 Identities = 115/146 (78%), Positives = 130/146 (89%)

Query: 1   MAKFLILWSVVMVVGVAICTVSAKKAPWKMHTLFSVECQNYFDWQTVGLMHSYRKAKQPG 60
           M KF IL  +VM+        +A+KAPW++  LFSVECQNYFDWQTVGLMHS+RKAKQPG
Sbjct: 1   MEKFSILLLLVMLDQFIFTVEAAQKAPWRIQVLFSVECQNYFDWQTVGLMHSFRKAKQPG 60

Query: 61  PITRLLSCTDEQKKSYRGMHLAPTFEVPSMSKHPTTGDWYPAINKPAGVLYWLKHSKDAE 120
            ITRLLSCT+EQKK+YRGMHLAPTFEVPSMSKHPTTGDWYPAINKPAGVL+WLKHSKDAE
Sbjct: 61  HITRLLSCTEEQKKTYRGMHLAPTFEVPSMSKHPTTGDWYPAINKPAGVLHWLKHSKDAE 120

Query: 121 NVDFVVILDADMIIRGPIIPWELGAE 146
           N+D+V+ILDADMIIRG I+PW+LGAE
Sbjct: 121 NIDWVIILDADMIIRGRIVPWKLGAE 146



 Score =  108 bits (270), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 54/103 (52%), Positives = 67/103 (65%)

Query: 29  KMHTLFSVECQNYFDWQTVGLMHSYRKAKQPGPITRLLSCTDEQKKSYRGMHLAPTFEVP 88
           K+HT+FS EC  YFDWQTVGLMHS+  + QPG ITRLLSC+DE  K Y+G +LAPT  VP
Sbjct: 406 KIHTVFSTECTPYFDWQTVGLMHSFHLSGQPGNITRLLSCSDEDLKLYKGHNLAPTHYVP 465

Query: 89  SMSKHPTTGDWYPAINKPAGVLYWLKHSKDAENVDFVVILDAD 131
           SMS+HP TGD Y            + H +  + V  V+I+  D
Sbjct: 466 SMSQHPLTGDCYLIGCDNELAKLHISHPEACDKVGGVIIMHID 508


>Glyma05g06390.1 
          Length = 799

 Score =  228 bits (581), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 103/118 (87%), Positives = 114/118 (96%)

Query: 29  KMHTLFSVECQNYFDWQTVGLMHSYRKAKQPGPITRLLSCTDEQKKSYRGMHLAPTFEVP 88
           ++HTLFSVECQNYFDWQTVGLM+SYRKAK PGPITRLLSCTDE+K  Y+GMHLAPTFEVP
Sbjct: 9   RIHTLFSVECQNYFDWQTVGLMNSYRKAKHPGPITRLLSCTDEEKNKYKGMHLAPTFEVP 68

Query: 89  SMSKHPTTGDWYPAINKPAGVLYWLKHSKDAENVDFVVILDADMIIRGPIIPWELGAE 146
           SMS+HP TGDWYPAINKPAGV++WLKHSK+A+NVD+VVILDADMIIRGPIIPWELGAE
Sbjct: 69  SMSRHPKTGDWYPAINKPAGVVHWLKHSKEAKNVDWVVILDADMIIRGPIIPWELGAE 126



 Score =  175 bits (443), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 82/118 (69%), Positives = 94/118 (79%), Gaps = 4/118 (3%)

Query: 29  KMHTLFSVECQNYFDWQTVGLMHSYRKAKQPGPITRLLSCTDEQKKSYRGMHLAPTFEVP 88
           K+HT+FS EC  YFDWQTVGLMHS+R++ QPG ITRLLSC+DE  + Y+G  LAPT  VP
Sbjct: 373 KIHTIFSTECTPYFDWQTVGLMHSFRRSGQPGNITRLLSCSDEDLRQYKGHDLAPTHYVP 432

Query: 89  SMSKHPTTGDWYPAINKPAGVLYWLKHSK-DAENVDFVVILDADMIIRGPIIPWELGA 145
           SMS+HP TGDWYPAINKPA VL+WL H   DAE   F+VILDADMI+RGPI PWE  A
Sbjct: 433 SMSRHPLTGDWYPAINKPAAVLHWLNHVNIDAE---FIVILDADMILRGPITPWEFKA 487


>Glyma19g07790.1 
          Length = 780

 Score =  175 bits (443), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 84/125 (67%), Positives = 96/125 (76%), Gaps = 4/125 (3%)

Query: 22  SAKKAPWKMHTLFSVECQNYFDWQTVGLMHSYRKAKQPGPITRLLSCTDEQKKSYRGMHL 81
            A K   K+HT+FS EC  YFDWQTVGLMHS+R++ QPG ITRLLSC+DE  + Y+G  L
Sbjct: 346 GAGKPHPKIHTIFSTECTTYFDWQTVGLMHSFRRSGQPGNITRLLSCSDEDLQQYKGHDL 405

Query: 82  APTFEVPSMSKHPTTGDWYPAINKPAGVLYWLKHSK-DAENVDFVVILDADMIIRGPIIP 140
           APT  VPSMS+HP TGDWYPAINKPA VL+WL H   DAE   F+VILDADMI+RGPI P
Sbjct: 406 APTHYVPSMSRHPLTGDWYPAINKPAAVLHWLNHVNIDAE---FIVILDADMILRGPITP 462

Query: 141 WELGA 145
           WE  A
Sbjct: 463 WEFKA 467



 Score =  105 bits (263), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 53/76 (69%), Positives = 60/76 (78%), Gaps = 10/76 (13%)

Query: 77  RGMHLA------PTFEVPSMSKHPTTGDWYPAINKPAGVLYWLKHSKDAENVDFVVILDA 130
           +GMH        P +EV      P TGDWYPAINKPAGV++WLKHSK+A+NVD+VVILDA
Sbjct: 8   KGMHFGTHPLRLPFYEVDP----PKTGDWYPAINKPAGVVHWLKHSKEAKNVDWVVILDA 63

Query: 131 DMIIRGPIIPWELGAE 146
           DMIIRGPIIPWELGAE
Sbjct: 64  DMIIRGPIIPWELGAE 79