Miyakogusa Predicted Gene

Lj5g3v2123620.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj5g3v2123620.1 Non Chatacterized Hit- tr|B9S6V9|B9S6V9_RICCO
Amino acid transporter, putative OS=Ricinus communis G,59.21,1e-18,
,CUFF.56736.1
         (87 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma11g09190.1                                                       109   8e-25
Glyma09g33030.1                                                        89   1e-18

>Glyma11g09190.1 
          Length = 374

 Score =  109 bits (272), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 55/76 (72%), Positives = 64/76 (84%), Gaps = 3/76 (3%)

Query: 1   MIVLSQAGFCVNFLIFLATSLGFLTNNAAGDTVPVFLGLTLKVLFLWGCLPFQLGLNSMP 60
           MIVLSQ+GFCV++LIF++T+L FLTNN   DT P+FLG T KVLFLW C PFQLGL S+ 
Sbjct: 123 MIVLSQSGFCVSYLIFISTTLAFLTNN---DTTPLFLGFTPKVLFLWACFPFQLGLISVR 179

Query: 61  TLTHLVPLSMFADVVD 76
           TLTHL PLS+FADVVD
Sbjct: 180 TLTHLAPLSIFADVVD 195


>Glyma09g33030.1 
          Length = 428

 Score = 88.6 bits (218), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 46/80 (57%), Positives = 59/80 (73%), Gaps = 4/80 (5%)

Query: 1   MIVLSQAGFCVNFLIFLATSLGFLT---NNAAGDTVPVFLGL-TLKVLFLWGCLPFQLGL 56
           MIV S  GFCV++LIF++T+L +L    + ++     +F G  T KVLFLWGC PFQLGL
Sbjct: 120 MIVFSHCGFCVSYLIFISTTLAYLAGDDDTSSASWSSLFWGFATPKVLFLWGCFPFQLGL 179

Query: 57  NSMPTLTHLVPLSMFADVVD 76
           N++PTLTHL PLS+FAD VD
Sbjct: 180 NAIPTLTHLAPLSIFADFVD 199