Miyakogusa Predicted Gene

Lj5g3v2113500.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj5g3v2113500.1 Non Chatacterized Hit- tr|A2ZJE6|A2ZJE6_ORYSI
Putative uncharacterized protein OS=Oryza sativa
subsp,44.06,2e-19,seg,NULL,CUFF.56726.1
         (156 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma12g12790.1                                                       129   1e-30
Glyma20g26360.1                                                       120   8e-28
Glyma10g04220.1                                                        93   9e-20
Glyma10g40940.1                                                        81   5e-16

>Glyma12g12790.1 
          Length = 155

 Score =  129 bits (325), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 78/158 (49%), Positives = 94/158 (59%), Gaps = 5/158 (3%)

Query: 1   MGKTSTRSDSKSDRKLEKKLEFYSKVKDTVASLGAXXXXXXXXXXXXXXXXXX--XAYNL 58
           MGK   + DSKSDRK EKK++FYSKVKD V SL A                     AYNL
Sbjct: 1   MGKK--KLDSKSDRKFEKKVQFYSKVKDAVTSLSAQKSITKKKKKSKQQRRQKKLKAYNL 58

Query: 59  SSILESLPELKASQKSDREDDFKLNCKSRKKLLLKEGQRLSAVLKDNLFQADPLAILHQH 118
           SS+LESLPE+KAS+K    +D KL CKSR+ L+L E  R+SAVL D  FQADPL+ +HQ+
Sbjct: 59  SSLLESLPEVKASKKPGCANDSKLTCKSRQMLVLTERDRISAVLNDPNFQADPLSAIHQY 118

Query: 119 LQNTQPIEEXXXXXXXXXXXXXXXXXXXASTGLQSMDM 156
           +QN QP+ E                   ASTGLQSM+M
Sbjct: 119 IQNKQPVVE-EQPKKKVNKNGSRKKKSKASTGLQSMEM 155


>Glyma20g26360.1 
          Length = 156

 Score =  120 bits (300), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 74/158 (46%), Positives = 92/158 (58%), Gaps = 4/158 (2%)

Query: 1   MGKTSTRSDSKSDRKLEKKLEFYSKVKDTVASLGAXXXXXXXXXXXXXXXXXXX--AYNL 58
           MGK   R DSK DRK EKK++FYSKVKD V SL                       AYNL
Sbjct: 1   MGKK--RLDSKFDRKFEKKVQFYSKVKDAVTSLSTQKSITKKKKKSKQQRRQNKLKAYNL 58

Query: 59  SSILESLPELKASQKSDREDDFKLNCKSRKKLLLKEGQRLSAVLKDNLFQADPLAILHQH 118
           SS+LESLPE+K+S+K   E+D KL CKSR+ L+L E  R+SAVL D  F+ADPL+ +HQ+
Sbjct: 59  SSLLESLPEVKSSKKPVCENDGKLKCKSRQILVLTERDRISAVLNDPNFRADPLSAIHQY 118

Query: 119 LQNTQPIEEXXXXXXXXXXXXXXXXXXXASTGLQSMDM 156
           +Q+ Q + E                   ASTGLQSM+M
Sbjct: 119 IQSKQLVVEEQPKKKVNKNGSKKKKKSKASTGLQSMEM 156


>Glyma10g04220.1 
          Length = 106

 Score = 93.2 bits (230), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 45/73 (61%), Positives = 57/73 (78%)

Query: 55  AYNLSSILESLPELKASQKSDREDDFKLNCKSRKKLLLKEGQRLSAVLKDNLFQADPLAI 114
           AYNLSS+LESLPE+KAS+K   E+D KL CKSR+ L+L E  R+SAVL D  FQADPL+ 
Sbjct: 16  AYNLSSLLESLPEVKASKKPGYENDSKLKCKSRQMLVLSERDRISAVLDDPTFQADPLSA 75

Query: 115 LHQHLQNTQPIEE 127
            H+++QN QP+ E
Sbjct: 76  THEYVQNKQPVVE 88


>Glyma10g40940.1 
          Length = 69

 Score = 80.9 bits (198), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 40/65 (61%), Positives = 52/65 (80%)

Query: 55  AYNLSSILESLPELKASQKSDREDDFKLNCKSRKKLLLKEGQRLSAVLKDNLFQADPLAI 114
           AYNLSS+LESLPE+KAS+K   E+D KL CKSR+ L+L E  ++SAVL D  FQADPL+ 
Sbjct: 5   AYNLSSLLESLPEVKASKKPGCENDSKLKCKSRQMLVLTERDQISAVLNDPNFQADPLSA 64

Query: 115 LHQHL 119
           +HQ++
Sbjct: 65  IHQYI 69