Miyakogusa Predicted Gene

Lj5g3v2112080.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj5g3v2112080.1 tr|K1QTB5|K1QTB5_CRAGI TIP41-like protein
OS=Crassostrea gigas PE=4 SV=1,38.14,0.0000000003,TIP41,TIP41-like
protein; PUTATIVE CYTOSKELETAL PROTEIN,NULL; GAF/PUTATIVE CYTOSKELETAL
PROTEIN,NULL,CUFF.56699.1
         (290 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma20g26690.1                                                       494   e-140
Glyma10g40650.1                                                       479   e-135
Glyma14g10030.1                                                        75   1e-13

>Glyma20g26690.1 
          Length = 288

 Score =  494 bits (1273), Expect = e-140,   Method: Compositional matrix adjust.
 Identities = 234/287 (81%), Positives = 253/287 (88%)

Query: 1   MEFAVDENDLKAAGAELFEDGGRKGVRIHGWLIESRRHSILTSSNVEEWEQKLHTSHLPE 60
           ME  VDENDLKAAGAELF +GGR+G+RI+GWLIE+RRHSIL SS  +EWEQKL TSHLPE
Sbjct: 1   MELEVDENDLKAAGAELFAEGGRRGIRINGWLIETRRHSILNSSTFQEWEQKLDTSHLPE 60

Query: 61  MVFGENTLILKHLSSGTKIHFNAFDALRGWKQXXXXXXXXXXXXQWKFRCKPSEQVILDY 120
           MVFGENTLILKHLSSGT IHFNAFDALRGWKQ            +WKFR KPS+QVILDY
Sbjct: 61  MVFGENTLILKHLSSGTNIHFNAFDALRGWKQEALPPVEVPAAAKWKFRSKPSQQVILDY 120

Query: 121 DYTFTTPYCGSGTIEIDKDLNASEISEETSNLHWEDCKEQIDLVSLASKEPILFYDEVVL 180
           DYTFTTPYCGSGTIEIDKDLN  E S+ETS++HWEDCK+QID+V+LASKEPILFYDEVVL
Sbjct: 121 DYTFTTPYCGSGTIEIDKDLNEGETSKETSDIHWEDCKDQIDVVALASKEPILFYDEVVL 180

Query: 181 YEDELADNGVSLLTVKVRVMPSSWFLLLRFWLRVDGVLIRLRDTRMHCVFGGSTNPVILR 240
           YEDELADNGVSLLT+KVRVMPSSWFLLLRFWLRVDGVLIRLR+TRMHCVFGGSTNP+ILR
Sbjct: 181 YEDELADNGVSLLTIKVRVMPSSWFLLLRFWLRVDGVLIRLRETRMHCVFGGSTNPIILR 240

Query: 241 ESCWRESTFQALSAKGTPFDPAVYNDPSIISQRLPIVKQMTQNLVIS 287
           ESCWRESTFQALSAKG PFD   Y DPS ISQ+LPI+   TQ LVIS
Sbjct: 241 ESCWRESTFQALSAKGHPFDSGAYGDPSFISQKLPIIMHKTQKLVIS 287


>Glyma10g40650.1 
          Length = 291

 Score =  479 bits (1233), Expect = e-135,   Method: Compositional matrix adjust.
 Identities = 229/289 (79%), Positives = 251/289 (86%), Gaps = 2/289 (0%)

Query: 1   MEFAVDENDLKAAGAELFEDGGRKGVRIHGWLIESRRHSILTSSNVEEWEQKLHTSHLPE 60
           ME  VDENDLKAAGAELF DGGR+G+RI+GW+IE+RRHSIL SS ++EWEQ L TSHLPE
Sbjct: 2   MELEVDENDLKAAGAELFVDGGRRGIRINGWVIETRRHSILNSSTLQEWEQNLDTSHLPE 61

Query: 61  MVFGENTLILKHLSSGTKIHFNAFDALRGWKQXXXXXXXXXXXXQWKFRCKPSEQVILDY 120
           MVFGENTLILKHLSSGT IHFNAFDALRGWKQ            +WKFR KPS+QVILDY
Sbjct: 62  MVFGENTLILKHLSSGTNIHFNAFDALRGWKQEALPPVEVPAAAKWKFRSKPSQQVILDY 121

Query: 121 DYTFTTPYCGSGTIEIDKDLNASE--ISEETSNLHWEDCKEQIDLVSLASKEPILFYDEV 178
           DYTFTTPYCGSGT+EIDKD N  E   S+ETS++HWEDCK+QID+V+LASKEPILFYDEV
Sbjct: 122 DYTFTTPYCGSGTMEIDKDPNEGERETSKETSDIHWEDCKDQIDVVALASKEPILFYDEV 181

Query: 179 VLYEDELADNGVSLLTVKVRVMPSSWFLLLRFWLRVDGVLIRLRDTRMHCVFGGSTNPVI 238
           VLYEDELADNGVSLLTVKVRVMPSSWFLLL+FWLRVDGVLIRLR+TRMHCVFGG+TNP+I
Sbjct: 182 VLYEDELADNGVSLLTVKVRVMPSSWFLLLQFWLRVDGVLIRLRETRMHCVFGGNTNPII 241

Query: 239 LRESCWRESTFQALSAKGTPFDPAVYNDPSIISQRLPIVKQMTQNLVIS 287
           LRESCWRESTFQ LSAKG PFD   Y DPS ISQ+LPI+   TQ LVIS
Sbjct: 242 LRESCWRESTFQDLSAKGHPFDSGAYGDPSFISQKLPIIMHKTQKLVIS 290


>Glyma14g10030.1 
          Length = 43

 Score = 74.7 bits (182), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 34/43 (79%), Positives = 37/43 (86%)

Query: 49 WEQKLHTSHLPEMVFGENTLILKHLSSGTKIHFNAFDALRGWK 91
          WEQ L  S+LP+MVFGE+TLILKH SS T IHFNAFDALRGWK
Sbjct: 1  WEQNLDASYLPQMVFGESTLILKHSSSCTNIHFNAFDALRGWK 43