Miyakogusa Predicted Gene

Lj5g3v2110900.2
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj5g3v2110900.2 Non Chatacterized Hit- tr|I1KFM9|I1KFM9_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.5056 PE=,49.04,1e-16,
,CUFF.56678.2
         (104 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma10g40510.1                                                       166   4e-42
Glyma20g26810.1                                                       156   5e-39
Glyma06g47210.1                                                        69   8e-13
Glyma04g14850.1                                                        69   1e-12
Glyma04g14850.2                                                        59   1e-09

>Glyma10g40510.1 
          Length = 739

 Score =  166 bits (421), Expect = 4e-42,   Method: Composition-based stats.
 Identities = 77/103 (74%), Positives = 82/103 (79%), Gaps = 1/103 (0%)

Query: 2   DNLSSDAMALNGYYGSXXXXXXXXXXXXXMEPPHEGYYVNQQSMQGLGPLSSMAPSHDGF 61
           DNLSSDA+ LNGYYG+             MEPP +GYYVNQ SMQGLGPL+SM PSHDGF
Sbjct: 638 DNLSSDAITLNGYYGTQQNVQGLVQLNL-MEPPQDGYYVNQHSMQGLGPLNSMGPSHDGF 696

Query: 62  FGTQHSIHGLGGQLEFRPATSFGYSLQDDEPDPQFHGNSSRNT 104
           FGTQ  IHGLGGQLEFRPAT+FGYSL  DEPDPQFHGNSSRNT
Sbjct: 697 FGTQQGIHGLGGQLEFRPATTFGYSLHQDEPDPQFHGNSSRNT 739


>Glyma20g26810.1 
          Length = 789

 Score =  156 bits (394), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 77/104 (74%), Positives = 83/104 (79%), Gaps = 2/104 (1%)

Query: 1   MDNLSSDAMALNGYYGSXXXXXXXXXXXXXMEPPHEGYYVNQQSMQGLGPLSSMAPSHDG 60
           MDNLS+DA+ LNGYYG+             MEPP +GYYVNQ SMQGLGPL+SM PSHDG
Sbjct: 688 MDNLSTDAITLNGYYGTQQNVQGLVQLNL-MEPPQDGYYVNQHSMQGLGPLNSMGPSHDG 746

Query: 61  FFGTQHSIHGLGGQLEFRPATSFGYSLQDDEPDPQFHGNSSRNT 104
           FFGTQ  IHGLGGQLEFR AT+FGYSLQ DEPDPQFHGNSSRNT
Sbjct: 747 FFGTQQGIHGLGGQLEFRRATTFGYSLQ-DEPDPQFHGNSSRNT 789


>Glyma06g47210.1 
          Length = 842

 Score = 69.3 bits (168), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 43/104 (41%), Positives = 58/104 (55%), Gaps = 7/104 (6%)

Query: 1   MDNLSSDAMALNGYYGSXXXXXXXXXXXXXMEPPHEGYYVNQQSMQGLGPLSSMAPSHDG 60
           MD  S+ A+ L GYYG+             M P  + YY NQQ++QGLGP+SS+  SHDG
Sbjct: 742 MDKFSTRAVTLEGYYGTQQSVQGMLNL---MGPTRDDYYGNQQTLQGLGPISSIPTSHDG 798

Query: 61  FFGTQHSIHGLGGQLEFRPATSFGYSLQDDE--PDPQFHGNSSR 102
           ++GT   + GL  QL+F   T F Y ++DD      Q H + SR
Sbjct: 799 YYGTHQGMPGL-AQLDF-LRTGFTYGIRDDTNVRATQLHEDPSR 840


>Glyma04g14850.1 
          Length = 843

 Score = 68.9 bits (167), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 44/105 (41%), Positives = 60/105 (57%), Gaps = 9/105 (8%)

Query: 1   MDNLSSDAMALNGYYGSXXXXXXXXXXXXXMEPPHEGYYVNQQSMQGLGPLSSMAPSHDG 60
           MD  S+ A+ L GYYG+             M P  + YY NQQ++QGLGP+SS+  SHDG
Sbjct: 743 MDKFSTRAVTLEGYYGTQQSVQGMLNL---MGPTRDDYYGNQQTLQGLGPISSIPTSHDG 799

Query: 61  FFGTQHSIHGLGGQLEFRPATSFGYSLQDDEPD---PQFHGNSSR 102
           ++GT   + GL  QL+F   T F Y ++DD P+    Q H + SR
Sbjct: 800 YYGTHQGMPGL-AQLDF-LRTGFTYGIRDD-PNVRATQLHEDPSR 841


>Glyma04g14850.2 
          Length = 824

 Score = 58.5 bits (140), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 29/64 (45%), Positives = 39/64 (60%), Gaps = 3/64 (4%)

Query: 1   MDNLSSDAMALNGYYGSXXXXXXXXXXXXXMEPPHEGYYVNQQSMQGLGPLSSMAPSHDG 60
           MD  S+ A+ L GYYG+             M P  + YY NQQ++QGLGP+SS+  SHDG
Sbjct: 743 MDKFSTRAVTLEGYYGTQQSVQGMLNL---MGPTRDDYYGNQQTLQGLGPISSIPTSHDG 799

Query: 61  FFGT 64
           ++GT
Sbjct: 800 YYGT 803