Miyakogusa Predicted Gene

Lj5g3v2099510.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj5g3v2099510.1 tr|G7IEV8|G7IEV8_MEDTR Endo-1 4-beta-xylanase
OS=Medicago truncatula GN=MTR_1g106800 PE=4
SV=1,42.95,5e-18,seg,NULL,CUFF.56639.1
         (156 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma20g27030.1                                                       114   3e-26
Glyma10g40310.1                                                       113   7e-26

>Glyma20g27030.1 
          Length = 297

 Score =  114 bits (286), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 80/159 (50%), Positives = 91/159 (57%), Gaps = 37/159 (23%)

Query: 1   MSHRDSDSKLRHSKFDREPSPKRYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVTTNXX 60
           MSHRDSDSK RHSKFDREPSPKRY                              VT++  
Sbjct: 1   MSHRDSDSKRRHSKFDREPSPKRYRRDGKQERERDRNR----------------VTSDGG 44

Query: 61  XXXXXDQNPTDRDQRNLPPPPHSKQESVGAGDKKSND---HQEPPKHSAQPPRSRSYYQH 117
                       DQRN  PP H ++E   A  KKSN    H++ PKHS+QPPRSRSY+QH
Sbjct: 45  ------------DQRN--PPHHFRREPFDAAPKKSNSNDHHEQQPKHSSQPPRSRSYHQH 90

Query: 118 AERGNTEQVGRSAGRREAGGKAFAQSKENSERVETSQSR 156
            ERG+T QVGRS G+REAGGK F QSKEN+E    SQSR
Sbjct: 91  DERGSTGQVGRSNGQREAGGKVFTQSKENNE----SQSR 125


>Glyma10g40310.1 
          Length = 288

 Score =  113 bits (283), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 76/157 (48%), Positives = 89/157 (56%), Gaps = 41/157 (26%)

Query: 1   MSHRDSDSKLRHSKFDREPSPKRYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVTTNXX 60
           MSHRDSDSK RHSKFDRE SPKRY                              VT++  
Sbjct: 1   MSHRDSDSKRRHSKFDREASPKRYRRDSNR------------------------VTSDGG 36

Query: 61  XXXXXDQNPTDRDQRNLPPPPHSKQESVGAGDKKSND---HQEPPKHSAQPPRSRSYYQH 117
                       D+RN  PP HS++E   A  KKSN    H+ PP+H +QPPRSRSY+QH
Sbjct: 37  ------------DRRN--PPHHSRREPFDAAPKKSNSNDHHENPPQHLSQPPRSRSYHQH 82

Query: 118 AERGNTEQVGRSAGRREAGGKAFAQSKENSERVETSQ 154
            ERG+T QVGRS+G+REAGGK F QSKEN+E   T Q
Sbjct: 83  DERGSTGQVGRSSGQREAGGKVFTQSKENNESQSTEQ 119