Miyakogusa Predicted Gene

Lj5g3v2056280.3
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj5g3v2056280.3 Non Chatacterized Hit- tr|Q9M1X1|Q9M1X1_ARATH
Putative uncharacterized protein F16M2_30
OS=Arabidops,33.98,4e-17,seg,NULL,CUFF.56598.3
         (534 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma20g28260.1                                                       430   e-120
Glyma10g39490.1                                                       387   e-107
Glyma02g16580.1                                                        75   1e-13
Glyma10g03250.1                                                        73   9e-13

>Glyma20g28260.1 
          Length = 1747

 Score =  430 bits (1106), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 284/512 (55%), Positives = 311/512 (60%), Gaps = 41/512 (8%)

Query: 4   IREARRTSMAANGLTRRRHRTN-SLRDSPEEDGGMELQEPTXXX----XXXXXXXXXXXX 58
           IREARR++MAANGLTRRRHRTN SLRDSPEEDG MELQEP+                   
Sbjct: 67  IREARRSTMAANGLTRRRHRTNNSLRDSPEEDGAMELQEPSRLRDRGGSGKKDRDRERER 126

Query: 59  XXXXXXXXXXXXXXXXXXMHSSREDGGEDTSDESINXXXXXXXXXXXXXXXXXXXXXXSV 118
                             MHSSREDGGEDTS+ESIN                      SV
Sbjct: 127 ERERDRLGRSKKRRGDRLMHSSREDGGEDTSEESINDEDDDDDEDGGGGGSGSGSA--SV 184

Query: 119 RMXXXXXXXXXXXXXXXXXXXXXRKSFPPAKVFRPAPPTTWKAADEMIGVSVPRKARSAS 178
           RM                     RKSFPPAKV RP PPTTWKAADEMIGVSVPRKARSAS
Sbjct: 185 RMLPLNPSSLSNQHH--------RKSFPPAKVLRPTPPTTWKAADEMIGVSVPRKARSAS 236

Query: 179 TKRSHECWASSGGGIVAEQNHRQXXXXXXXXXXXXXXXXXXXXXGRKKIKQNGGGPKFR- 237
           TKRSHECWASSGGGIVAEQNHRQ                      RKKIKQNGG  KFR 
Sbjct: 237 TKRSHECWASSGGGIVAEQNHRQPSTSPVRAAAPASPSSSNASV-RKKIKQNGGA-KFRP 294

Query: 238 ------PPKSSPKASQDEIEIEIAEVLYGMMRQPQGQGPSKQEIIANNHESSSGKFDSRE 291
                        ++QDEIEIEIAEVLYGMMRQP  QGPSKQEIIAN+    S KFDSRE
Sbjct: 295 PKTTTSSSSKPSSSAQDEIEIEIAEVLYGMMRQP--QGPSKQEIIAND----STKFDSRE 348

Query: 292 QTNNKSSSDGKXXXXXXXXXXXXXAATPMSAVAPKRKRPRPVKNEEENXXXXXXXXXXXX 351
             +NKSS+D K             +ATPMSAVAPKRKRPRPVK+E+EN            
Sbjct: 349 --SNKSSTDAK--SPISNPQNSSSSATPMSAVAPKRKRPRPVKHEDENPASLIVRSSPIS 404

Query: 352 XTTKVESDQPSKMETSSSNSAKNNPGSAAENLTNSLPVQASPEPVKPERNNASSDSKALT 411
            TTK ESDQPSKMET SSN  KNN GS +ENL +S  VQ  PEPVKPE N       A T
Sbjct: 405 STTKAESDQPSKMETCSSNLDKNNVGSVSENLAHSQTVQIMPEPVKPENNEF---KPAAT 461

Query: 412 EESEKQKDAGLNKEVAPPQSPKKESSSTVLQQVDDTSESAVKATKSNQTMNESVNQREEK 471
           EE+EKQKD GL++ V  PQ PKKES    ++QV D     VKATK+N +++ES NQREEK
Sbjct: 462 EEAEKQKDVGLSEVVVSPQLPKKESP---VRQVADDDREDVKATKANHSISESDNQREEK 518

Query: 472 FQIDLMAPPPTGKSSPERDVV-ENNLVAEADK 502
           FQIDLMAPPP  +SSPERDV   NN+V +A+K
Sbjct: 519 FQIDLMAPPPPSRSSPERDVENNNNMVIDAEK 550


>Glyma10g39490.1 
          Length = 1507

 Score =  387 bits (993), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 269/546 (49%), Positives = 296/546 (54%), Gaps = 66/546 (12%)

Query: 1   MDRIREARRTSMAANGLTRRRHRTNSLRDSPEEDGGMELQEPTXXXXXXXXXXXXXXXXX 60
           MDRIREARR++MAANGLTRRRHRTNSLRDSPEEDGGMELQEP+                 
Sbjct: 1   MDRIREARRSTMAANGLTRRRHRTNSLRDSPEEDGGMELQEPSRLRDRGGSGKKDRDRER 60

Query: 61  XXXXXXXXXXXXXXX----XMHSSREDGGEDTSDESINXXXXXXXXXXXXXXXXXXXXXX 116
                               MHSSREDGGEDTS+ESIN                      
Sbjct: 61  ERERERDRLGRSKKRRGDRLMHSSREDGGEDTSEESINDEDDDDDEDGGGGGGSA----- 115

Query: 117 SVRMXXXXXXXXXXXXXXXXXXXXXRKSFPPAKVFRPAPPTTWKAADEMIGVSVPRKARS 176
           SVRM                     RKSFPPAKV RP PPTTWKAADEMIGVSVPRKARS
Sbjct: 116 SVRMLPLNPSSLSNHHH--------RKSFPPAKVLRPTPPTTWKAADEMIGVSVPRKARS 167

Query: 177 ASTKRSHECWASSGGGIVAEQNHRQXXXXXXXXXXXXXXXXXXXXXGRKKIKQNGGGPKF 236
           ASTKRSHECWASSGGGIVAEQNHRQ                      RKKIKQNGG  KF
Sbjct: 168 ASTKRSHECWASSGGGIVAEQNHRQPSTSPVRAAAPASPSSSNASV-RKKIKQNGGA-KF 225

Query: 237 RPPKSSPKA--------SQDEIEIEIAEVLYGMMRQPQGQGPSKQEIIANNHESSSGKFD 288
           RPPK++           +QDEIEIEIAEVLYGMMRQP  QGPSKQ+I+AN+    S KFD
Sbjct: 226 RPPKTTTTTTTSKPSSLAQDEIEIEIAEVLYGMMRQP--QGPSKQDIVAND----SNKFD 279

Query: 289 SREQTNNKSSSDGKXXXXXXXXXXXXXAATPMSAVAPKRKRPRPVKNEEENXXXXXXXXX 348
           SRE  +NKSS+D K             +ATPMSAVAPKRKRPRPVK+E+EN         
Sbjct: 280 SRE--SNKSSTDAK--SPISNPQNSSSSATPMSAVAPKRKRPRPVKHEDENPASLSVRSS 335

Query: 349 XXXXTTKVESDQPSKMETSSSNSAKNNPGSAAENLTNSLPVQASPEPVKPERNNASSDSK 408
               TTK ESDQPSKMET SSN  KNN GS  ENL NS  VQ  PE         S++ K
Sbjct: 336 PISSTTKAESDQPSKMETCSSNLDKNNVGSVTENLVNSQTVQVMPE---------SNEPK 386

Query: 409 ALTEESEKQKDAGLNKEVAPPQSPKKESSSTVLQQVDDTSESAVKATKSNQTMNESVNQR 468
             TE             V  PQSPKKE  S V Q  DD   S   A   N  ++  +   
Sbjct: 387 PATE------------VVVSPQSPKKE--SPVRQVADDDPFSVEFALNVNPDLSLLIFLF 432

Query: 469 EEKFQIDL-MAPPPTGKSSPERDVVENNLVAEADKVSG-VHHMAMVSFYGRIGTKDIWGL 526
                     APPP  +SSPERD   NN+V +A+KV G        S+  +   +  W  
Sbjct: 433 GSPGITQYPRAPPPPLRSSPERDAENNNMVVDAEKVGGPCISYEFFSYKNKYLRRFCW-- 490

Query: 527 VCAGSE 532
             AGSE
Sbjct: 491 --AGSE 494


>Glyma02g16580.1 
          Length = 1158

 Score = 75.5 bits (184), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 50/111 (45%), Positives = 59/111 (53%), Gaps = 11/111 (9%)

Query: 151 FRPAPPTTWKAADEMIGVSVPRKARSASTKRSHECW--ASSGGGIVAEQNHRQXXXXXXX 208
           F PA P ++K  DEMIGV+VPRKARSAS KRSHE W  ASSGG    E N RQ       
Sbjct: 112 FTPAKPPSFKITDEMIGVTVPRKARSASAKRSHESWISASSGG---EELNFRQRSNSPGG 168

Query: 209 XXXXXXXXXXXXXXGRKKIKQNGGGPKFRPPKSSPKASQDEIEIEIAEVLY 259
                          RKK+K+        P     K+S  ++EIEIAE+LY
Sbjct: 169 QSVEPASPSSSNVSRRKKMKE------IEPVSKPSKSSSSDLEIEIAELLY 213



 Score = 53.5 bits (127), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 28/43 (65%), Positives = 33/43 (76%), Gaps = 3/43 (6%)

Query: 1  MDRIREARRTSMAA--NGLTRRRHRTNSLRDSPEEDGGMELQE 41
          MDR RE+RR+SMA   NG  RRRHRT +LRDS EE G +EL+E
Sbjct: 1  MDRTRESRRSSMATSTNGFPRRRHRTIALRDSSEE-GAVELRE 42


>Glyma10g03250.1 
          Length = 1217

 Score = 72.8 bits (177), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 50/113 (44%), Positives = 60/113 (53%), Gaps = 11/113 (9%)

Query: 151 FRPAPPTTWKAADEMIGVSVPRKARSASTKRSHECW--ASSGGGIVAEQNHRQXXXXXXX 208
           F  A P  +K  +EMIGVSVPRKARSAS KRS+E W  ASSGG    E N RQ       
Sbjct: 112 FTSAKPPPFKITEEMIGVSVPRKARSASAKRSYESWISASSGG---EELNFRQRSNSPGG 168

Query: 209 XXXXXXXXXXXXXXGRKKIKQNGGGPKFRPPKSSPKASQDEIEIEIAEVLYGM 261
                          RKK+K+        P   + K+S  +IEIEIAE+LYG+
Sbjct: 169 QSVEPTSPSSSNVSLRKKMKE------IEPVSKTSKSSSSDIEIEIAELLYGL 215