Miyakogusa Predicted Gene
- Lj5g3v2045980.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj5g3v2045980.1 Non Chatacterized Hit- tr|B9FBT2|B9FBT2_ORYSJ
Putative uncharacterized protein OS=Oryza sativa
subsp,46.39,1e-18,coiled-coil,NULL; seg,NULL; DUF1423,Protein of
unknown function DUF1423, plant,gene.g62874.t1.1
(445 letters)
Database: Glyma1.pep
75,778 sequences; 25,431,882 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Glyma18g15050.1 383 e-106
Glyma01g44790.1 379 e-105
Glyma11g00830.1 375 e-104
Glyma01g44810.1 158 1e-38
Glyma01g33510.1 107 4e-23
Glyma10g25510.1 106 4e-23
Glyma01g33470.1 102 9e-22
Glyma20g19670.1 100 4e-21
Glyma20g19670.2 100 4e-21
Glyma18g43260.1 89 1e-17
Glyma06g13310.1 65 1e-10
Glyma03g16970.1 59 1e-08
>Glyma18g15050.1
Length = 468
Score = 383 bits (983), Expect = e-106, Method: Compositional matrix adjust.
Identities = 226/474 (47%), Positives = 277/474 (58%), Gaps = 45/474 (9%)
Query: 6 VAPEQSGQGLPYAPENFPNPGDVWSWRTGLR-VAVTGFFKDRYLYPPANICRAV------ 58
VAPE SG+G PYAPEN+P GD+W WRTG R VA F+DRYLY P + RA+
Sbjct: 2 VAPEMSGEGFPYAPENWPEEGDIWGWRTGRRIVANRSRFQDRYLYLPNRLIRALKEEKEK 61
Query: 59 -NSGSS-----------RRRITFASKLAVQRFVKESFPDANVQDFFASFSWKIPAICPGN 106
N GS R++ FASKLAV+R++K FPDA++ FFASFSWKIPA+ N
Sbjct: 62 ENPGSGADSGPSSSSIRRQQHIFASKLAVERYIKTHFPDADIDAFFASFSWKIPAL-RSN 120
Query: 107 GHAYAAEPISAVPPHLLAXXXXXXXXXXXXXXXVGCKVGNQRCRSLILEEVEKYSPAMPC 166
G+A P++AVP +A V CK N++C SL+LEE+EKYSPAMPC
Sbjct: 121 GNAV---PVAAVPLQQIAQEAYDSDSEGV----VKCKARNKKCTSLVLEEIEKYSPAMPC 173
Query: 167 DICCANPRFXXXXXXXXXXKALDLAYDGYSYFKCPAKVGDYICGHAVHFDCALRSYLAGT 226
DICC+ P F K + AY GY+Y KC VG ICGH H +CALR LAG
Sbjct: 174 DICCSEPGFCRDCCCILCCKTVSSAYGGYNYIKCQVNVGGGICGHVAHMECALRCLLAGK 233
Query: 227 VGGIIGLDVEYLCMRCDGKTDLISHVNKLLQTCEAIDADDDNKEKILNLGVSLLGESEKA 286
VGG IGLD +Y C RCDG+TD+ISHVN L+QTC A D D + ++KILNLG LL S+K
Sbjct: 234 VGGSIGLDAQYHCRRCDGRTDMISHVNNLIQTCRAADLDAEIRKKILNLGACLLRGSQKP 293
Query: 287 SAKELMRRIELAISKLKGGTSTGDI--------TNVVDNPTDXXXXXXXXXXXXKESYLS 338
AKEL+ RIELAISKLK GT+ DI + DN D + L
Sbjct: 294 VAKELLCRIELAISKLKCGTNLEDIWKEDYSFVAHSADNGNDVMEVMVYDDPFEVRTGLE 353
Query: 339 DFG------RXXXXXXXXXXYLRKSQENEFNLAEERLNEHKRYLQSLYQQLAFEKSELAN 392
+ + LRKSQE E+ +AEE L + K YL+ LYQQL EK ELA
Sbjct: 354 SYDFLPRSLKLESEVDQVLQALRKSQELEYKVAEETLQDQKTYLKRLYQQLDREKYELAC 413
Query: 393 EAHSSRSDALFHDAAVGERVEQIRREVKKFEEMKKVAQGFGSTPKHNL-EYFGL 445
+ + S + +AV ER +QIRREV KFE MKKVA GFG T + E+FGL
Sbjct: 414 Q---NSSTSDVSSSAVRERKKQIRREVAKFEIMKKVANGFGRTSNDIVKEHFGL 464
>Glyma01g44790.1
Length = 495
Score = 379 bits (972), Expect = e-105, Method: Compositional matrix adjust.
Identities = 224/474 (47%), Positives = 274/474 (57%), Gaps = 45/474 (9%)
Query: 6 VAPEQSGQGLPYAPENFPNPGDVWSWRTGLR-VAVTGFFKDRYLYPPANICRAVNSGSS- 63
VAPE SG+G PYAPEN+P GD+W WRTG R VA F+DRYLY P + RA+
Sbjct: 29 VAPEMSGEGFPYAPENWPEDGDIWGWRTGRRIVANRSHFQDRYLYLPNRLIRALKEEKEK 88
Query: 64 -----------------RRRITFASKLAVQRFVKESFPDANVQDFFASFSWKIPAICPGN 106
R++ FASKLAV+R++K FPDA++ FFASFSWKIPA+ N
Sbjct: 89 ENPGSGADSGSSSSSIRRQQHIFASKLAVERYIKTYFPDADIDAFFASFSWKIPAL-RSN 147
Query: 107 GHAYAAEPISAVPPHLLAXXXXXXXXXXXXXXXVGCKVGNQRCRSLILEEVEKYSPAMPC 166
G+A PI+AVP +A V CK N++C SL+LEE+EKYSPAM C
Sbjct: 148 GNAL---PIAAVPLQQIAQEAYDSDSGDV----VKCKARNKKCTSLVLEEIEKYSPAMHC 200
Query: 167 DICCANPRFXXXXXXXXXXKALDLAYDGYSYFKCPAKVGDYICGHAVHFDCALRSYLAGT 226
DICC+ P F K + AY GY+Y KC G ICGH H +CALR LAG
Sbjct: 201 DICCSEPGFCRDCCCILCCKTVSSAYGGYNYIKCQVNSGGGICGHVAHMECALRCLLAGK 260
Query: 227 VGGIIGLDVEYLCMRCDGKTDLISHVNKLLQTCEAIDADDDNKEKILNLGVSLLGESEKA 286
VGG IGLD +Y C RCDG+TD+ISHVN LLQTC A D DD+ ++KILNLG LL S+K
Sbjct: 261 VGGNIGLDAQYHCRRCDGRTDMISHVNNLLQTCRAADLDDEIRKKILNLGACLLRGSQKP 320
Query: 287 SAKELMRRIELAISKLKGGTSTGD--------ITNVVDNPTDXXXXXXXXXXXXKESYLS 338
AKEL+ RIELAISKLK GT+ D I + DN D + L
Sbjct: 321 VAKELLCRIELAISKLKCGTNLEDIWKEDDSFIAHSADNGNDVMEVMVYDDPFEVRTGLE 380
Query: 339 DFG------RXXXXXXXXXXYLRKSQENEFNLAEERLNEHKRYLQSLYQQLAFEKSELAN 392
+ + LRKSQE E+ +AEE L + K YL++LYQQL EK ELA
Sbjct: 381 SYDFLPRSIKLESEVDQVLRALRKSQELEYKVAEETLQDQKTYLKNLYQQLDCEKYELAC 440
Query: 393 EAHSSRSDALFHDAAVGERVEQIRREVKKFEEMKKVAQGFGSTPKHNL-EYFGL 445
+ + S + +AV ER +QIRREV KFE MKKVA GFG T + E+FGL
Sbjct: 441 Q---NSSTSDVSSSAVRERKKQIRREVAKFEIMKKVANGFGRTSNDIVKEHFGL 491
>Glyma11g00830.1
Length = 485
Score = 375 bits (962), Expect = e-104, Method: Compositional matrix adjust.
Identities = 220/476 (46%), Positives = 279/476 (58%), Gaps = 35/476 (7%)
Query: 2 NLPPVAPEQSGQGLPYAPENFPNPGDVWSWRTGLRV-AVTGFFKDRYLYPPANICRAV-- 58
NL VAPE SG+G PYAPEN+P GD+W WRTG RV A FKDRYLY P + RA+
Sbjct: 9 NLQAVAPEVSGEGFPYAPENWPEQGDIWGWRTGRRVVANRSHFKDRYLYLPNRLIRALKE 68
Query: 59 --------NSGSSR---RRITFASKLAVQRFVKESFPDANVQDFFASFSWKIPAICPGNG 107
+SGSS R+ FASKLAV+ ++K+ +P+A++ FFASFSWKIPA+ +
Sbjct: 69 EKEKENAADSGSSSIRSRQHIFASKLAVECYIKKYYPEADLDAFFASFSWKIPALPSSST 128
Query: 108 HA---YAAEPISAVPPHLLAXXXXXXXXXXXXXXXVGCKVGNQRCRSLILEEVEKYSPAM 164
+ ++ +V + V CK N++C SL+LEEVEKYSPAM
Sbjct: 129 NVVMVFSFFSYFSVTLSMQHHTIAQEAYDSDSGDVVKCKASNKKCTSLVLEEVEKYSPAM 188
Query: 165 PCDICCANPRFXXXXXXXXXXKALDLAYDGYSYFKCPAKVGDYICGHAVHFDCALRSYLA 224
PCDICC+ P F K + AY GYSY KC +G ICGH H +CALRS LA
Sbjct: 189 PCDICCSEPGFCRDCVCILCCKTVSSAYGGYSYIKCQVNIGGGICGHVAHMECALRSLLA 248
Query: 225 GTVGGIIGLDVEYLCMRCDGKTDLISHVNKLLQTCEAIDADDDNKEKILNLGVSLLGESE 284
G VGG IGLD +Y C RCDG+TD+ISHVN LLQTC A D DD+ ++KILNLG LL S+
Sbjct: 249 GKVGGSIGLDAQYHCRRCDGRTDMISHVNNLLQTCRAADLDDEIRKKILNLGACLLRGSQ 308
Query: 285 KASAKELMRRIELAISKLKGGTSTGDI--------TNVVDNPTDXXXXXXXXXXXXKESY 336
K AKEL+ RIELAISKLK GT+ +I + +DN D +
Sbjct: 309 KPVAKELLCRIELAISKLKCGTNLEEIWKEDDSLIAHSLDNGNDVMEVMVNDGPFEVRTG 368
Query: 337 LSDFG------RXXXXXXXXXXYLRKSQENEFNLAEERLNEHKRYLQSLYQQLAFEKSEL 390
L + + LRKSQE E+ + EE L + K YL++LYQQ+ EK EL
Sbjct: 369 LESYDFQPRSLKLESEVDQVLQALRKSQELEYKVVEETLQDQKTYLKNLYQQVECEKYEL 428
Query: 391 ANEAHSSRSDALFHDAAVGERVEQIRREVKKFEEMKKVAQGFGSTPKHNL-EYFGL 445
A + + S + +AV +R +QIRREV+KFE MKKVA GFG T + E+FGL
Sbjct: 429 ACQ---NSSTSDVSSSAVRDRKKQIRREVEKFEIMKKVAYGFGRTSNDIVKEHFGL 481
>Glyma01g44810.1
Length = 139
Score = 158 bits (399), Expect = 1e-38, Method: Composition-based stats.
Identities = 76/135 (56%), Positives = 88/135 (65%)
Query: 146 NQRCRSLILEEVEKYSPAMPCDICCANPRFXXXXXXXXXXKALDLAYDGYSYFKCPAKVG 205
N++C SL+LEEVEKYS MP DICC+ P F K + AY GYSY KC VG
Sbjct: 2 NKKCTSLVLEEVEKYSLTMPWDICCSEPGFCRDCVCSLCCKTVSSAYGGYSYIKCKVNVG 61
Query: 206 DYICGHAVHFDCALRSYLAGTVGGIIGLDVEYLCMRCDGKTDLISHVNKLLQTCEAIDAD 265
ICGH H +CAL S LAG VGG IGLD +Y C CDG++ +IS VN LLQTC A D D
Sbjct: 62 GGICGHVSHMECALESLLAGKVGGSIGLDAQYHCRHCDGRSVIISQVNNLLQTCRAADLD 121
Query: 266 DDNKEKILNLGVSLL 280
D+ + KILNLG LL
Sbjct: 122 DEIRNKILNLGACLL 136
>Glyma01g33510.1
Length = 491
Score = 107 bits (266), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 47/100 (47%), Positives = 66/100 (66%), Gaps = 5/100 (5%)
Query: 2 NLPPVAPEQSGQGLPYAPENFPNPGDVWSWRTGLRVAVTGFFKDRYLYPPANICRAVNSG 61
+L PV+P SGQGLPYAPE +PNP DVW W+ R + G F DR+LY P ++
Sbjct: 62 DLKPVSPNSSGQGLPYAPEGWPNPSDVWGWKVLKRTSNAGHFCDRHLYLPKSL-----QI 116
Query: 62 SSRRRITFASKLAVQRFVKESFPDANVQDFFASFSWKIPA 101
SS +R +F +K V+R+++ +FP+ ++ FF FSWKIPA
Sbjct: 117 SSHKRQSFRTKRDVERYIESNFPNMGIEAFFGLFSWKIPA 156
>Glyma10g25510.1
Length = 575
Score = 106 bits (265), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 45/100 (45%), Positives = 67/100 (67%), Gaps = 6/100 (6%)
Query: 2 NLPPVAPEQSGQGLPYAPENFPNPGDVWSWRTGLRVAVTGFFKDRYLYPPANICRAVNSG 61
+L PV+P SG GLPYAPE +PNPGDVW W+ R+ +G+F DR+L P ++ +
Sbjct: 147 DLQPVSPFSSGVGLPYAPEGWPNPGDVWGWKVAKRMNNSGYFTDRFLTLPRSLEK----- 201
Query: 62 SSRRRITFASKLAVQRFVKESFPDANVQDFFASFSWKIPA 101
SRR+ F SK + R+++ ++PD ++ FFA FSW+IP+
Sbjct: 202 -SRRKAEFRSKADISRYLQSNYPDMKIEAFFALFSWQIPS 240
>Glyma01g33470.1
Length = 132
Score = 102 bits (254), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 47/102 (46%), Positives = 66/102 (64%), Gaps = 5/102 (4%)
Query: 1 MNLPPVAPEQSGQGLPYAPENFPNPGDVWSWRTGLRVAVTGFFKDRYLYPPANICRAVNS 60
+L PV+P SGQGLPYAPE +PNP DVW W+ R + G F DR+LY P ++
Sbjct: 29 FDLKPVSPNSSGQGLPYAPEGWPNPSDVWGWKVLKRTSNAGHFCDRHLYLPKSL-----Q 83
Query: 61 GSSRRRITFASKLAVQRFVKESFPDANVQDFFASFSWKIPAI 102
SS +R +F +K V+R+++ +FP+ ++ FF FSWKIPA
Sbjct: 84 ISSHKRQSFRTKRDVERYIESNFPNMGIEAFFGLFSWKIPAT 125
>Glyma20g19670.1
Length = 470
Score = 100 bits (248), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 43/99 (43%), Positives = 63/99 (63%), Gaps = 6/99 (6%)
Query: 3 LPPVAPEQSGQGLPYAPENFPNPGDVWSWRTGLRVAVTGFFKDRYLYPPANICRAVNSGS 62
L PV+P SG GLPYAPE +P+PGDVW W+ R+ G+F DR+L P ++ +
Sbjct: 43 LQPVSPFSSGVGLPYAPEGWPSPGDVWGWKVAKRMNSFGYFIDRFLTLPRSL------ET 96
Query: 63 SRRRITFASKLAVQRFVKESFPDANVQDFFASFSWKIPA 101
SRR+ SK + R+++ +FPD ++ F A FSW+IP+
Sbjct: 97 SRRKTELRSKADISRYLQSNFPDMKIEAFLALFSWQIPS 135
>Glyma20g19670.2
Length = 468
Score = 100 bits (248), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 43/99 (43%), Positives = 63/99 (63%), Gaps = 6/99 (6%)
Query: 3 LPPVAPEQSGQGLPYAPENFPNPGDVWSWRTGLRVAVTGFFKDRYLYPPANICRAVNSGS 62
L PV+P SG GLPYAPE +P+PGDVW W+ R+ G+F DR+L P ++ +
Sbjct: 43 LQPVSPFSSGVGLPYAPEGWPSPGDVWGWKVAKRMNSFGYFIDRFLTLPRSL------ET 96
Query: 63 SRRRITFASKLAVQRFVKESFPDANVQDFFASFSWKIPA 101
SRR+ SK + R+++ +FPD ++ F A FSW+IP+
Sbjct: 97 SRRKTELRSKADISRYLQSNFPDMKIEAFLALFSWQIPS 135
>Glyma18g43260.1
Length = 131
Score = 89.0 bits (219), Expect = 1e-17, Method: Composition-based stats.
Identities = 39/96 (40%), Positives = 57/96 (59%), Gaps = 5/96 (5%)
Query: 3 LPPVAPEQSGQGLPYAPENFPNPGDVWSWRTGLRVAVTGFFKDRYLYPPANICRAVNSGS 62
+ PV+P +G+GLPYA E +PN DVW W+ G R G+F DRYLY ++ S
Sbjct: 41 IQPVSPFSTGEGLPYAFEEWPNASDVWGWKVGRRANKAGYFHDRYLYLSTSL-----HTS 95
Query: 63 SRRRITFASKLAVQRFVKESFPDANVQDFFASFSWK 98
F SK V+R+++ +FP+ +++FF FSWK
Sbjct: 96 CCYSWCFQSKPDVERYIQSNFPNMKIEEFFGLFSWK 131
>Glyma06g13310.1
Length = 96
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 37/97 (38%), Positives = 57/97 (58%), Gaps = 7/97 (7%)
Query: 1 MNLPPVAPEQSGQGLPYAPENFPNPGDVWSWRTGLRVAVTGFFKDRYLYPPANICRAVNS 60
+ V+ S +GLPYAP+ +PN GD+W + G R G+F DRYL C + +
Sbjct: 4 FDFQSVSSFSSCEGLPYAPKGWPNHGDIWGRKVGRRTNKAGYFHDRYL------CLSRSL 57
Query: 61 GSSRRRI-TFASKLAVQRFVKESFPDANVQDFFASFS 96
SS R+ +F SKLAV+ +++ FP+ +++FF FS
Sbjct: 58 QSSSRKTRSFQSKLAVKWYIEPDFPNMKIEEFFPLFS 94
>Glyma03g16970.1
Length = 289
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/84 (38%), Positives = 45/84 (53%), Gaps = 20/84 (23%)
Query: 15 LPYAPENFPNPGDVWSWRTGLRVAVTGFFKDRYLYPPANICRAVNSGSSRRRITFASKLA 74
LPYA + +PN TG+F D YL P ++ R SSR F SK
Sbjct: 1 LPYALKGWPN---------------TGYFHDSYLSLPRSLER-----SSRHSRRFQSKPV 40
Query: 75 VQRFVKESFPDANVQDFFASFSWK 98
VQR+++ +FP+ +++FFA FSWK
Sbjct: 41 VQRYIESNFPNMKIEEFFALFSWK 64