Miyakogusa Predicted Gene
- Lj5g3v2045600.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj5g3v2045600.1 Non Chatacterized Hit- tr|I1NGH9|I1NGH9_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.398
PE=4,80.36,0.000000000000001,seg,NULL; S-methyl_trans,Homocysteine
S-methyltransferase; HCY,Homocysteine S-methyltransferase;
PRE,gene.g62846.t1.1
(269 letters)
Database: Glyma1.pep
75,778 sequences; 25,431,882 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Glyma20g28720.6 383 e-107
Glyma20g28720.5 383 e-106
Glyma20g28720.4 382 e-106
Glyma20g28720.3 382 e-106
Glyma20g28720.1 382 e-106
Glyma19g34120.1 285 5e-77
Glyma03g31280.1 242 4e-64
Glyma08g30150.1 232 3e-61
Glyma20g28720.2 211 6e-55
Glyma08g30150.2 170 2e-42
Glyma05g23960.1 83 3e-16
Glyma20g28690.1 78 1e-14
Glyma02g35470.1 60 3e-09
>Glyma20g28720.6
Length = 280
Score = 383 bits (984), Expect = e-107, Method: Compositional matrix adjust.
Identities = 187/220 (85%), Positives = 197/220 (89%)
Query: 2 ETALFMRDFLDKCGGYAVIDGGFATELERHGADLHDPLWSAKCLISSPHLVRRVHLDYLD 61
ET FMRDFLDKCGG AVIDGGFATELERHGADL+D LWSAKCLISSPHLVRRVHLDYLD
Sbjct: 7 ETPSFMRDFLDKCGGCAVIDGGFATELERHGADLNDELWSAKCLISSPHLVRRVHLDYLD 66
Query: 62 AGANIILTASYQATLQGFEAKGFSREEGETLLRRSVELALEAREIYNARCTKDSSDFIRD 121
AGANIILTASYQAT+QGFEAKGFSREEGET+LRRSVE+A EAREIY RCTKDSSDF+RD
Sbjct: 67 AGANIILTASYQATIQGFEAKGFSREEGETMLRRSVEIAREAREIYYDRCTKDSSDFMRD 126
Query: 122 ERYRRRPILVAASVGSYGAYLADGAEYTGDYGDAVTVQTLKDFHRERVKILVDAGADLIA 181
ERYR+RPIL+AASVGSYGAYLADG+EY GDYGDAVTVQTLKDFHRERVKILV+AGADLIA
Sbjct: 127 ERYRKRPILIAASVGSYGAYLADGSEYVGDYGDAVTVQTLKDFHRERVKILVEAGADLIA 186
Query: 182 FETIPNKMXXXXXXXXXXXXGIEIPAWLSFSCKDESNVKS 221
FETIPNK+ GIE PAW SFSCKDESNV S
Sbjct: 187 FETIPNKLEAQAYAELLEEEGIETPAWFSFSCKDESNVVS 226
>Glyma20g28720.5
Length = 298
Score = 383 bits (983), Expect = e-106, Method: Compositional matrix adjust.
Identities = 187/220 (85%), Positives = 197/220 (89%)
Query: 2 ETALFMRDFLDKCGGYAVIDGGFATELERHGADLHDPLWSAKCLISSPHLVRRVHLDYLD 61
ET FMRDFLDKCGG AVIDGGFATELERHGADL+D LWSAKCLISSPHLVRRVHLDYLD
Sbjct: 7 ETPSFMRDFLDKCGGCAVIDGGFATELERHGADLNDELWSAKCLISSPHLVRRVHLDYLD 66
Query: 62 AGANIILTASYQATLQGFEAKGFSREEGETLLRRSVELALEAREIYNARCTKDSSDFIRD 121
AGANIILTASYQAT+QGFEAKGFSREEGET+LRRSVE+A EAREIY RCTKDSSDF+RD
Sbjct: 67 AGANIILTASYQATIQGFEAKGFSREEGETMLRRSVEIAREAREIYYDRCTKDSSDFMRD 126
Query: 122 ERYRRRPILVAASVGSYGAYLADGAEYTGDYGDAVTVQTLKDFHRERVKILVDAGADLIA 181
ERYR+RPIL+AASVGSYGAYLADG+EY GDYGDAVTVQTLKDFHRERVKILV+AGADLIA
Sbjct: 127 ERYRKRPILIAASVGSYGAYLADGSEYVGDYGDAVTVQTLKDFHRERVKILVEAGADLIA 186
Query: 182 FETIPNKMXXXXXXXXXXXXGIEIPAWLSFSCKDESNVKS 221
FETIPNK+ GIE PAW SFSCKDESNV S
Sbjct: 187 FETIPNKLEAQAYAELLEEEGIETPAWFSFSCKDESNVVS 226
>Glyma20g28720.4
Length = 340
Score = 382 bits (982), Expect = e-106, Method: Compositional matrix adjust.
Identities = 187/220 (85%), Positives = 197/220 (89%)
Query: 2 ETALFMRDFLDKCGGYAVIDGGFATELERHGADLHDPLWSAKCLISSPHLVRRVHLDYLD 61
ET FMRDFLDKCGG AVIDGGFATELERHGADL+D LWSAKCLISSPHLVRRVHLDYLD
Sbjct: 7 ETPSFMRDFLDKCGGCAVIDGGFATELERHGADLNDELWSAKCLISSPHLVRRVHLDYLD 66
Query: 62 AGANIILTASYQATLQGFEAKGFSREEGETLLRRSVELALEAREIYNARCTKDSSDFIRD 121
AGANIILTASYQAT+QGFEAKGFSREEGET+LRRSVE+A EAREIY RCTKDSSDF+RD
Sbjct: 67 AGANIILTASYQATIQGFEAKGFSREEGETMLRRSVEIAREAREIYYDRCTKDSSDFMRD 126
Query: 122 ERYRRRPILVAASVGSYGAYLADGAEYTGDYGDAVTVQTLKDFHRERVKILVDAGADLIA 181
ERYR+RPIL+AASVGSYGAYLADG+EY GDYGDAVTVQTLKDFHRERVKILV+AGADLIA
Sbjct: 127 ERYRKRPILIAASVGSYGAYLADGSEYVGDYGDAVTVQTLKDFHRERVKILVEAGADLIA 186
Query: 182 FETIPNKMXXXXXXXXXXXXGIEIPAWLSFSCKDESNVKS 221
FETIPNK+ GIE PAW SFSCKDESNV S
Sbjct: 187 FETIPNKLEAQAYAELLEEEGIETPAWFSFSCKDESNVVS 226
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 44/55 (80%), Positives = 45/55 (81%), Gaps = 1/55 (1%)
Query: 216 ESNV-KSSGVAERDFVPYIDKWCDAGASLFGGCCRTTPNTIRGIAEAIYGKPQGK 269
ESN KSSG AE DFV YI KW DAGASLFGGCCRTTPNTIRGIAEA YGK + K
Sbjct: 284 ESNQWKSSGAAEHDFVSYIGKWRDAGASLFGGCCRTTPNTIRGIAEATYGKLKDK 338
>Glyma20g28720.3
Length = 341
Score = 382 bits (981), Expect = e-106, Method: Compositional matrix adjust.
Identities = 187/220 (85%), Positives = 197/220 (89%)
Query: 2 ETALFMRDFLDKCGGYAVIDGGFATELERHGADLHDPLWSAKCLISSPHLVRRVHLDYLD 61
ET FMRDFLDKCGG AVIDGGFATELERHGADL+D LWSAKCLISSPHLVRRVHLDYLD
Sbjct: 7 ETPSFMRDFLDKCGGCAVIDGGFATELERHGADLNDELWSAKCLISSPHLVRRVHLDYLD 66
Query: 62 AGANIILTASYQATLQGFEAKGFSREEGETLLRRSVELALEAREIYNARCTKDSSDFIRD 121
AGANIILTASYQAT+QGFEAKGFSREEGET+LRRSVE+A EAREIY RCTKDSSDF+RD
Sbjct: 67 AGANIILTASYQATIQGFEAKGFSREEGETMLRRSVEIAREAREIYYDRCTKDSSDFMRD 126
Query: 122 ERYRRRPILVAASVGSYGAYLADGAEYTGDYGDAVTVQTLKDFHRERVKILVDAGADLIA 181
ERYR+RPIL+AASVGSYGAYLADG+EY GDYGDAVTVQTLKDFHRERVKILV+AGADLIA
Sbjct: 127 ERYRKRPILIAASVGSYGAYLADGSEYVGDYGDAVTVQTLKDFHRERVKILVEAGADLIA 186
Query: 182 FETIPNKMXXXXXXXXXXXXGIEIPAWLSFSCKDESNVKS 221
FETIPNK+ GIE PAW SFSCKDESNV S
Sbjct: 187 FETIPNKLEAQAYAELLEEEGIETPAWFSFSCKDESNVVS 226
Score = 89.0 bits (219), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 45/56 (80%), Positives = 46/56 (82%), Gaps = 2/56 (3%)
Query: 216 ESN--VKSSGVAERDFVPYIDKWCDAGASLFGGCCRTTPNTIRGIAEAIYGKPQGK 269
ESN VKSSG AE DFV YI KW DAGASLFGGCCRTTPNTIRGIAEA YGK + K
Sbjct: 284 ESNQWVKSSGAAEHDFVSYIGKWRDAGASLFGGCCRTTPNTIRGIAEATYGKLKDK 339
>Glyma20g28720.1
Length = 342
Score = 382 bits (981), Expect = e-106, Method: Compositional matrix adjust.
Identities = 187/220 (85%), Positives = 197/220 (89%)
Query: 2 ETALFMRDFLDKCGGYAVIDGGFATELERHGADLHDPLWSAKCLISSPHLVRRVHLDYLD 61
ET FMRDFLDKCGG AVIDGGFATELERHGADL+D LWSAKCLISSPHLVRRVHLDYLD
Sbjct: 7 ETPSFMRDFLDKCGGCAVIDGGFATELERHGADLNDELWSAKCLISSPHLVRRVHLDYLD 66
Query: 62 AGANIILTASYQATLQGFEAKGFSREEGETLLRRSVELALEAREIYNARCTKDSSDFIRD 121
AGANIILTASYQAT+QGFEAKGFSREEGET+LRRSVE+A EAREIY RCTKDSSDF+RD
Sbjct: 67 AGANIILTASYQATIQGFEAKGFSREEGETMLRRSVEIAREAREIYYDRCTKDSSDFMRD 126
Query: 122 ERYRRRPILVAASVGSYGAYLADGAEYTGDYGDAVTVQTLKDFHRERVKILVDAGADLIA 181
ERYR+RPIL+AASVGSYGAYLADG+EY GDYGDAVTVQTLKDFHRERVKILV+AGADLIA
Sbjct: 127 ERYRKRPILIAASVGSYGAYLADGSEYVGDYGDAVTVQTLKDFHRERVKILVEAGADLIA 186
Query: 182 FETIPNKMXXXXXXXXXXXXGIEIPAWLSFSCKDESNVKS 221
FETIPNK+ GIE PAW SFSCKDESNV S
Sbjct: 187 FETIPNKLEAQAYAELLEEEGIETPAWFSFSCKDESNVVS 226
Score = 89.0 bits (219), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 45/56 (80%), Positives = 46/56 (82%), Gaps = 2/56 (3%)
Query: 216 ESN--VKSSGVAERDFVPYIDKWCDAGASLFGGCCRTTPNTIRGIAEAIYGKPQGK 269
ESN VKSSG AE DFV YI KW DAGASLFGGCCRTTPNTIRGIAEA YGK + K
Sbjct: 285 ESNQWVKSSGAAEHDFVSYIGKWRDAGASLFGGCCRTTPNTIRGIAEATYGKLKDK 340
>Glyma19g34120.1
Length = 333
Score = 285 bits (728), Expect = 5e-77, Method: Compositional matrix adjust.
Identities = 143/218 (65%), Positives = 169/218 (77%), Gaps = 2/218 (0%)
Query: 6 FMRDFLDKCGGYAVIDGGFATELERHGADLHDPLWSAKCLISSPHLVRRVHLDYLDAGAN 65
+ D L + GG AVIDGG ATELERHGADL+DPLWSAKCL S PHL+R+VHLDYL+ GA+
Sbjct: 4 LITDLLRQTGGTAVIDGGLATELERHGADLNDPLWSAKCLFSFPHLIRQVHLDYLENGAD 63
Query: 66 IILTASYQATLQGFEAKGFSREEGETLLRRSVELALEAREIYNARCTK-DSSDFIRDER- 123
II+TASYQAT+QGF+AKG+S EE E LLR SVE+A EARE+Y C S D D R
Sbjct: 64 IIITASYQATIQGFKAKGYSDEESEALLRSSVEIAREAREVYYKNCAGCRSGDGDDDGRI 123
Query: 124 YRRRPILVAASVGSYGAYLADGAEYTGDYGDAVTVQTLKDFHRERVKILVDAGADLIAFE 183
++RPILVAASVGSYGAYLADG+EY+GDYGDA+TV+TLKDFHR RV+IL D+GADL+AFE
Sbjct: 124 LKQRPILVAASVGSYGAYLADGSEYSGDYGDAITVETLKDFHRRRVQILADSGADLLAFE 183
Query: 184 TIPNKMXXXXXXXXXXXXGIEIPAWLSFSCKDESNVKS 221
T+PNK+ I+IPAW SF+ KD NV S
Sbjct: 184 TVPNKLEAEAYAQLLEEEDIKIPAWFSFNSKDGVNVVS 221
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 25/40 (62%), Positives = 34/40 (85%)
Query: 219 VKSSGVAERDFVPYIDKWCDAGASLFGGCCRTTPNTIRGI 258
V+++GV + DF+ Y++KWC+ GASL GGCCRTTP+TIR I
Sbjct: 284 VQNTGVTDEDFISYVNKWCELGASLVGGCCRTTPDTIRKI 323
>Glyma03g31280.1
Length = 307
Score = 242 bits (617), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 144/300 (48%), Positives = 178/300 (59%), Gaps = 53/300 (17%)
Query: 6 FMRDFLDKCGGYAVIDGGFATELERHGADLHDPLWSAKCLISSPHLVRRVHLDYLDAGAN 65
+ D L + GG AVIDGG ATELERHG DL+DPLWSAKCL SSPHL+R+VHLDYL+ GA+
Sbjct: 4 LITDLLRETGGSAVIDGGLATELERHGDDLNDPLWSAKCLFSSPHLIRQVHLDYLENGAD 63
Query: 66 IILTASYQATLQGFEAKGFSREEGETLLRRSVELALEAREIYNARCTK-DSSDFIRDER- 123
II+TASYQAT+QGF+AKG+S EE E LL+RS E+A EARE+Y+ C S D D R
Sbjct: 64 IIITASYQATIQGFKAKGYSDEESEALLKRSAEIAFEAREVYDKNCAGCCSGDGEDDGRI 123
Query: 124 YRRRPILVAASVGSYGAYLADGAEYTGDYGDAVTVQTLKDFHRERVKILVDAGADLIAFE 183
++RPILVAA VGSYGAYLADG+ Y+GDYGDA+TV+ R RV+IL D+ ADL+AFE
Sbjct: 124 LKQRPILVAALVGSYGAYLADGSGYSGDYGDAITVEI-----RRRVQILADSSADLLAFE 178
Query: 184 TIPNKMXXXXXXXXXXXXGIEIPAWLSFSCKDESNVKSSG-------------------- 223
T+ NK+ I+IPA S + ++ SG
Sbjct: 179 TVSNKLEAEAFAQLLEEEDIKIPA-CGDSLMECGSIAESGNKVVAVGIYCTPPRFIHGLI 237
Query: 224 -----VAERDFVPY----------IDKWCDAGASLF----------GGCCRTTPNTIRGI 258
V + V Y + +W D A GCCRTTP+TIR I
Sbjct: 238 VLLKRVTTKPIVIYPNSGETYDADLKEWVDRQAYFVFKIEERSIIECGCCRTTPDTIRKI 297
>Glyma08g30150.1
Length = 323
Score = 232 bits (592), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 116/230 (50%), Positives = 164/230 (71%), Gaps = 8/230 (3%)
Query: 6 FMRDFLDKCGGYAVIDGGFATELERHGADLHDPLWSAKCLISSPHLVRRVHLDYLDAGAN 65
+ D ++ GG AV DGGFAT+LE+HGA ++DPLWSA LI PHL+++VHL+YL+AGA+
Sbjct: 5 MLHDLIENAGGCAVTDGGFATQLEKHGASINDPLWSAIYLIKDPHLIKQVHLEYLEAGAD 64
Query: 66 IILTASYQATLQGFEAKGFSREEGETLLRRSVELALEAREIYNARCTKDSSDFIRDERYR 125
I++T+SYQATL GF +KG S EEGE+LL +SV+LA+EAR+ + +S+ +YR
Sbjct: 65 ILVTSSYQATLPGFSSKGLSIEEGESLLEKSVKLAVEARDGF-----WNSAIINPGNKYR 119
Query: 126 RRPILVAASVGSYGAYLADGAEYTGDYGDAVTVQTLKDFHRERVKILVDAGADLIAFETI 185
R LVAAS+GSYG+YLADG+EY+G YG V ++ LKDFHR R+++LV+AG DL+AFETI
Sbjct: 120 RA--LVAASIGSYGSYLADGSEYSGCYGPDVNLKKLKDFHRRRLQVLVEAGPDLLAFETI 177
Query: 186 PNKMXXXXXXXXXXXXGIEIPAWLSFSCKDESNVKSSGVAERDFVPYIDK 235
PNK+ ++IP+W+ F+ D N SG + +D + ++K
Sbjct: 178 PNKLEAQACVELLEEESVKIPSWICFTTVDGENA-PSGESFKDCLEALNK 226
>Glyma20g28720.2
Length = 245
Score = 211 bits (537), Expect = 6e-55, Method: Compositional matrix adjust.
Identities = 103/130 (79%), Positives = 111/130 (85%)
Query: 92 LLRRSVELALEAREIYNARCTKDSSDFIRDERYRRRPILVAASVGSYGAYLADGAEYTGD 151
+LRRSVE+A EAREIY RCTKDSSDF+RDERYR+RPIL+AASVGSYGAYLADG+EY GD
Sbjct: 1 MLRRSVEIAREAREIYYDRCTKDSSDFMRDERYRKRPILIAASVGSYGAYLADGSEYVGD 60
Query: 152 YGDAVTVQTLKDFHRERVKILVDAGADLIAFETIPNKMXXXXXXXXXXXXGIEIPAWLSF 211
YGDAVTVQTLKDFHRERVKILV+AGADLIAFETIPNK+ GIE PAW SF
Sbjct: 61 YGDAVTVQTLKDFHRERVKILVEAGADLIAFETIPNKLEAQAYAELLEEEGIETPAWFSF 120
Query: 212 SCKDESNVKS 221
SCKDESNV S
Sbjct: 121 SCKDESNVVS 130
Score = 89.0 bits (219), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 45/56 (80%), Positives = 46/56 (82%), Gaps = 2/56 (3%)
Query: 216 ESN--VKSSGVAERDFVPYIDKWCDAGASLFGGCCRTTPNTIRGIAEAIYGKPQGK 269
ESN VKSSG AE DFV YI KW DAGASLFGGCCRTTPNTIRGIAEA YGK + K
Sbjct: 188 ESNQWVKSSGAAEHDFVSYIGKWRDAGASLFGGCCRTTPNTIRGIAEATYGKLKDK 243
>Glyma08g30150.2
Length = 278
Score = 170 bits (430), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 89/183 (48%), Positives = 128/183 (69%), Gaps = 8/183 (4%)
Query: 53 RRVHLDYLDAGANIILTASYQATLQGFEAKGFSREEGETLLRRSVELALEAREIYNARCT 112
+VHL+YL+AGA+I++T+SYQATL GF +KG S EEGE+LL +SV+LA+EAR+ +
Sbjct: 7 NQVHLEYLEAGADILVTSSYQATLPGFSSKGLSIEEGESLLEKSVKLAVEARDGF----- 61
Query: 113 KDSSDFIRDERYRRRPILVAASVGSYGAYLADGAEYTGDYGDAVTVQTLKDFHRERVKIL 172
+S+ +YRR LVAAS+GSYG+YLADG+EY+G YG V ++ LKDFHR R+++L
Sbjct: 62 WNSAIINPGNKYRR--ALVAASIGSYGSYLADGSEYSGCYGPDVNLKKLKDFHRRRLQVL 119
Query: 173 VDAGADLIAFETIPNKMXXXXXXXXXXXXGIEIPAWLSFSCKDESNVKSSGVAERDFVPY 232
V+AG DL+AFETIPNK+ ++IP+W+ F+ D N SG + +D +
Sbjct: 120 VEAGPDLLAFETIPNKLEAQACVELLEEESVKIPSWICFTTVDGENA-PSGESFKDCLEA 178
Query: 233 IDK 235
++K
Sbjct: 179 LNK 181
>Glyma05g23960.1
Length = 92
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 39/51 (76%), Positives = 43/51 (84%)
Query: 219 VKSSGVAERDFVPYIDKWCDAGASLFGGCCRTTPNTIRGIAEAIYGKPQGK 269
VKSSGVAE DF+ +I KW D GASLFGGCC+TTPNTIRGIAEA YGK + K
Sbjct: 24 VKSSGVAEDDFISFIGKWRDVGASLFGGCCKTTPNTIRGIAEATYGKLKDK 74
>Glyma20g28690.1
Length = 125
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 38/60 (63%), Positives = 41/60 (68%)
Query: 162 KDFHRERVKILVDAGADLIAFETIPNKMXXXXXXXXXXXXGIEIPAWLSFSCKDESNVKS 221
K F E+VKILV+AGADLIAFETIPNK+ GIE PAW SFSC DESNV S
Sbjct: 19 KMFLMEKVKILVEAGADLIAFETIPNKLEAQACAELLEEEGIETPAWFSFSCNDESNVVS 78
>Glyma02g35470.1
Length = 132
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 29/63 (46%), Positives = 39/63 (61%), Gaps = 5/63 (7%)
Query: 150 GDYGDAVTVQTLKDFHRERVKILVDAGADLIAFETIPNKMXXXXXXXXXXXXGIEIPAWL 209
GDYGDA+TV+ R RV+IL ++ A L+AFET+PNK+ I+IPAW
Sbjct: 1 GDYGDAITVEI-----RRRVQILANSSAHLLAFETVPNKLEAEAFAQLLEEEDIKIPAWF 55
Query: 210 SFS 212
SF+
Sbjct: 56 SFN 58