Miyakogusa Predicted Gene

Lj5g3v2045470.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj5g3v2045470.1 CUFF.56528.1
         (107 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma20g28840.1                                                       125   1e-29
Glyma10g38970.1                                                       116   6e-27

>Glyma20g28840.1 
          Length = 270

 Score =  125 bits (314), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 61/74 (82%), Positives = 63/74 (85%), Gaps = 4/74 (5%)

Query: 1   MNGGXXXXXXXXXFRSILDKPLKHLTEDDISQLTREDCRRFLKEKGMRRPSWNKSQAIQQ 60
           MNGG         FRSILDKPL  LTEDDISQLTREDCRRFLKEKGMRRPSWNKSQAIQQ
Sbjct: 33  MNGGATTAT----FRSILDKPLNQLTEDDISQLTREDCRRFLKEKGMRRPSWNKSQAIQQ 88

Query: 61  VISLKALLEPTDED 74
           VISLKALLEP+D+D
Sbjct: 89  VISLKALLEPSDDD 102


>Glyma10g38970.1 
          Length = 337

 Score =  116 bits (290), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 58/69 (84%), Positives = 58/69 (84%), Gaps = 4/69 (5%)

Query: 1  MNGGXXXXXXXXXFRSILDKPLKHLTEDDISQLTREDCRRFLKEKGMRRPSWNKSQAIQQ 60
          MNGG         FRSILDKPL  LTEDDISQLTREDCRRFLKEKGMRRPSWNKSQAIQQ
Sbjct: 1  MNGGATTAT----FRSILDKPLNQLTEDDISQLTREDCRRFLKEKGMRRPSWNKSQAIQQ 56

Query: 61 VISLKALLE 69
          VISLKALLE
Sbjct: 57 VISLKALLE 65