Miyakogusa Predicted Gene

Lj5g3v2044990.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj5g3v2044990.1 tr|F4KDC4|F4KDC4_ARATH Hydroxyproline-rich
glycoprotein family protein OS=Arabidopsis thaliana
GN=At,33.33,2e-16,DUF688,Protein of unknown function
DUF688,CUFF.56490.1
         (309 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma10g38740.1                                                       325   3e-89
Glyma20g29000.1                                                       315   3e-86

>Glyma10g38740.1 
          Length = 297

 Score =  325 bits (833), Expect = 3e-89,   Method: Compositional matrix adjust.
 Identities = 197/323 (60%), Positives = 229/323 (70%), Gaps = 40/323 (12%)

Query: 1   MDQT--KKHVREPPSVPFLWELMPGIPKKDWKPEASSSVCNHYLPKIPLKLIASVPFVWE 58
           M++T  KKHVREPPSVPF+WE+ PGIPKKDWKPE    V     PK PLKLIASVPFVWE
Sbjct: 1   MNETGKKKHVREPPSVPFIWEVKPGIPKKDWKPEPEPEV-----PKTPLKLIASVPFVWE 55

Query: 59  EKPGIPLPNFSHVSVDY-VPPKPSTILFHVASSSGYSLASNYDYDYNNKQ---SSRDSQS 114
           EKPG PLPNF   SVD+ VPPKP  +L HVASSS +S A N+ +D++  +   SS D++S
Sbjct: 56  EKPGKPLPNF---SVDHPVPPKP--LLIHVASSSAFSFACNFGHDHDKDKGSLSSSDNES 110

Query: 115 ITTNLDLEAFSFD-------AAPSLLANCLVSSAKISNAIPLHEKSSSEHDCDQLETPSS 167
           ITT LDLEAFSFD       + PSLLANCLV SAK+S AIPL E + S            
Sbjct: 111 ITT-LDLEAFSFDEDESFVSSVPSLLANCLVPSAKVSTAIPLRETTPSSPA--------- 160

Query: 168 PASSETDSDTSSYATGRSSPTGSAILECLFPLRTPTKSSFLERDGNSTKVLSLGALEQKG 227
            +SSETDS TSSYATG SSP G+  LECLFPL  P KS FLERD N  KV S    E + 
Sbjct: 161 -SSSETDSGTSSYATGMSSPIGATFLECLFPL-FPPKSGFLERDENLEKVTS-SPQELRE 217

Query: 228 KDFGSEDCPSDMVRRPATLGELIMMSRRGSYVRKANQIGKWDPPKIMRKTGRKQAFGCFS 287
           K+   E+C SD+VR+P TLGELIM+SRR S  RKA Q+ KWDPPK   K  RKQAFGCFS
Sbjct: 218 KELVHENCASDLVRKPPTLGELIMISRRRSCRRKAIQMKKWDPPK---KITRKQAFGCFS 274

Query: 288 MVTSSSVIEGLLKKKY-PKLELI 309
           +VT S++IEGLLK+KY PKL+L+
Sbjct: 275 VVTDSNMIEGLLKRKYFPKLKLV 297


>Glyma20g29000.1 
          Length = 296

 Score =  315 bits (808), Expect = 3e-86,   Method: Compositional matrix adjust.
 Identities = 198/320 (61%), Positives = 224/320 (70%), Gaps = 42/320 (13%)

Query: 3   QTKKHVREPPSVPFLWELMPGIPKKDWKPEASSSVCNHYLPKIPLKLIASVPFVWEEKPG 62
           + KKHVREPPSVPF+WE+ PGIPKKDWKPEA        +P  PLKLIASVPFVWEEKPG
Sbjct: 6   KKKKHVREPPSVPFIWEVKPGIPKKDWKPEAE-------IPITPLKLIASVPFVWEEKPG 58

Query: 63  IPLPNFSHVSVDY-VPPKPSTILFHVASSSGYSLASNYDYDYNNKQS----SRDSQSITT 117
            PLPNFS   VD+ VP KP  +L HVASSSG+S+A N+ +D   K S    S D++SITT
Sbjct: 59  KPLPNFS---VDHPVPSKP--LLIHVASSSGFSVACNFGHDDKEKGSLSLSSSDNESITT 113

Query: 118 NLDLEAFSFD-------AAPSLLANCLVSSAKISNAIPLHEKSSSEHDCDQLETPSSPAS 170
            LDLEAFSFD       + PSLLANCLV SAK+  AIPL E            TPSSP S
Sbjct: 114 -LDLEAFSFDEDESFISSVPSLLANCLVPSAKVPTAIPLRET-----------TPSSPTS 161

Query: 171 SETDSDTSSYATGRSSPTGSAILECLFPLRTPTKSSFLERDGNSTKVLSLGALEQKGKDF 230
           SETDS TSSYATG SSP G+  LECLFPL  P KS FLE D N  KV S  A E + K+ 
Sbjct: 162 SETDSGTSSYATGLSSPIGATFLECLFPLYPP-KSCFLESDENLEKVTS-SAQELRKKEL 219

Query: 231 GSEDCPSDMVRRPATLGELIMMSRRGSYVRKANQIGKWDPPKIMRKTGRKQAFGCFSMVT 290
             EDC  D VRRP TLGELIMMSRR S  RKA Q+ KWDPPK   K  RKQAFGCFS+VT
Sbjct: 220 DLEDCAGDSVRRPPTLGELIMMSRRRSCRRKAVQMKKWDPPK---KITRKQAFGCFSVVT 276

Query: 291 SSSVIEGLLKKKY-PKLELI 309
            +++IEGLLK+KY P+L+L+
Sbjct: 277 DNNMIEGLLKRKYFPRLKLV 296