Miyakogusa Predicted Gene

Lj5g3v2028380.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj5g3v2028380.1 Non Chatacterized Hit- tr|F6H6C7|F6H6C7_VITVI
Putative uncharacterized protein OS=Vitis vinifera
GN=,41.35,1e-16,C2H2 and C2HC zinc fingers,NULL; seg,NULL; zinc
finger,Zinc finger, C2H2-like; ZINC_FINGER_C2H2_1,Zi,CUFF.56428.1
         (163 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma02g46270.1                                                       246   1e-65
Glyma02g46240.1                                                       148   2e-36
Glyma05g30150.1                                                        57   1e-08
Glyma08g13310.1                                                        56   1e-08

>Glyma02g46270.1 
          Length = 362

 Score =  246 bits (627), Expect = 1e-65,   Method: Compositional matrix adjust.
 Identities = 121/164 (73%), Positives = 132/164 (80%), Gaps = 3/164 (1%)

Query: 1   MKHFTNAQCLRNHVKSCHQYVTCDTCGSKQLKKNIKRHLRAHEA-GSSSEVFRCEFQGCD 59
           +KHFTN QCL+ HVKS HQY+TCD CG+KQLKKNIKRHLR+HEA GSSSE F+CEF+GC 
Sbjct: 201 LKHFTNVQCLQAHVKSSHQYMTCDICGTKQLKKNIKRHLRSHEAEGSSSETFQCEFKGCS 260

Query: 60  CTFSSKPNLRTHEKAVHLKEKPFVCGFPDCGMRFAYKHVRDNHEQTGKHVFTLGDFEEAD 119
           CTFS K NL  H+KAVH   KPF CGF DCGMRFAYKHVRDNHE+T KHVFTLGDFEEAD
Sbjct: 261 CTFSRKSNLDKHKKAVHFNVKPFACGFTDCGMRFAYKHVRDNHEKTAKHVFTLGDFEEAD 320

Query: 120 RQFXXXXXXXXXXKRVCPTVEMLVRKRVTPHSQLEKWLHMQDSE 163
            +F          KR CPTVEML+RKRVTP SQLE WL MQDSE
Sbjct: 321 EEF--RSRPRGGRKRTCPTVEMLIRKRVTPPSQLEHWLFMQDSE 362


>Glyma02g46240.1 
          Length = 259

 Score =  148 bits (374), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 72/99 (72%), Positives = 77/99 (77%), Gaps = 2/99 (2%)

Query: 65  KPNLRTHEKAVHLKEKPFVCGFPDCGMRFAYKHVRDNHEQTGKHVFTLGDFEEADRQFXX 124
           K NL  H+KAVHL  KPF CGFPDCGMRFAYKHVRDNHE+T KHVFTLGDFEEAD +F  
Sbjct: 163 KSNLDKHKKAVHLNVKPFACGFPDCGMRFAYKHVRDNHEKTAKHVFTLGDFEEADEEF-- 220

Query: 125 XXXXXXXXKRVCPTVEMLVRKRVTPHSQLEKWLHMQDSE 163
                   KR CPTVE+L+RKRVTP SQLE WL MQDSE
Sbjct: 221 RSRPRGGRKRTCPTVEVLIRKRVTPPSQLEHWLFMQDSE 259


>Glyma05g30150.1 
          Length = 371

 Score = 56.6 bits (135), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 40/105 (38%), Positives = 55/105 (52%), Gaps = 8/105 (7%)

Query: 2   KHFTNAQCLR--NHVKSCHQYVT-CDTCGSKQLKKN-IKRHLRAHEAGSSSEVFRCEFQG 57
           K F +A  LR  +H+    QYV   D CG K L  + +KRH   H   +    F C  +G
Sbjct: 86  KTFIDAGALRKHSHIHGERQYVCHYDGCGKKFLDSSKLKRHFLIH---TGERDFVCPHEG 142

Query: 58  CDCTFSSKPNLRTHEKAVHLKEKPFVCGFPDCGMRFAYKHVRDNH 102
           C   FS   NLR+H K  H +E   +C +PDCG R+A+++   NH
Sbjct: 143 CGKAFSLDFNLRSHMK-THSQENYHICPYPDCGKRYAHEYKLKNH 186


>Glyma08g13310.1 
          Length = 334

 Score = 56.2 bits (134), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 40/105 (38%), Positives = 55/105 (52%), Gaps = 8/105 (7%)

Query: 2   KHFTNAQCLR--NHVKSCHQYVT-CDTCGSKQLKKN-IKRHLRAHEAGSSSEVFRCEFQG 57
           K F +A  LR  +H+    QYV   D CG K L  + +KRH   H   +    F C  +G
Sbjct: 57  KTFIDAGALRKHSHIHGERQYVCHYDGCGKKFLDSSKLKRHFLIH---TGERDFVCPHEG 113

Query: 58  CDCTFSSKPNLRTHEKAVHLKEKPFVCGFPDCGMRFAYKHVRDNH 102
           C   FS   NLR+H K  H +E   +C +PDCG R+A+++   NH
Sbjct: 114 CGKAFSLDFNLRSHMK-THSQENYHICPYPDCGKRYAHEYKLKNH 157