Miyakogusa Predicted Gene
- Lj5g3v2027300.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj5g3v2027300.1 Non Chatacterized Hit- tr|B7FHI0|B7FHI0_MEDTR
Putative uncharacterized protein OS=Medicago
truncatul,27.43,0.000004,no description,Nucleotide-binding, alpha-beta
plait; RRM_1,RNA recognition motif domain;
ARGININE/SE,NODE_21991_length_1496_cov_227.554138.path2.1
(338 letters)
Database: Glyma1.pep
75,778 sequences; 25,431,882 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Glyma20g29460.1 360 1e-99
Glyma10g38400.1 345 5e-95
Glyma03g01920.3 140 1e-33
Glyma03g01920.2 140 1e-33
Glyma03g01920.1 140 2e-33
Glyma07g05900.2 129 6e-30
Glyma07g05900.1 129 7e-30
Glyma16g02500.1 127 1e-29
Glyma03g42020.1 89 7e-18
>Glyma20g29460.1
Length = 376
Score = 360 bits (924), Expect = 1e-99, Method: Compositional matrix adjust.
Identities = 209/324 (64%), Positives = 223/324 (68%), Gaps = 16/324 (4%)
Query: 19 FGRKGRRLRVEWTKHERGIXXXXXXXXXXXXXXXXXXLFVINFDTFHTRTRDLERHFEPY 78
FGRKGRRLRVEWTKHERG+ LFVINFDT+HTRTRDLERHFEPY
Sbjct: 65 FGRKGRRLRVEWTKHERGVRKPASSRRSSANGRPSKTLFVINFDTYHTRTRDLERHFEPY 124
Query: 79 GKIASVRIRRNFAFVQYESEDDACKALEATNNSKLLDRVISVEFAAKDDDDRRNGYSPEX 138
GKI SVRIRRNFAFVQYESEDDA +ALEATN SKLLDRVISVEFA KDDDDRRNGYSPE
Sbjct: 125 GKIVSVRIRRNFAFVQYESEDDASRALEATNMSKLLDRVISVEFAVKDDDDRRNGYSPER 184
Query: 139 XXXXXXXXXXXXXXXXXXXXXERGSPDYGRGASPYKRERSSPDY--XXXXXXXXXXXXXX 196
ERGSPDYGRG SPY+RER SPDY
Sbjct: 185 GRDRHRDRSRDGRRSPSPYRRERGSPDYGRGPSPYQRERGSPDYGRDRDRSRSRSPPRRE 244
Query: 197 XXXXXHGRRSPSPYRRERDGSDLVRDSSRSPFHKERGRTDR--SSSLSPKRRGRTSPQNG 254
+GRRS SP+RRER+GS+ VRDSSRSP+HKERGRTD S S SP+ RG+ SPQNG
Sbjct: 245 RASPAYGRRSLSPHRREREGSEPVRDSSRSPYHKERGRTDHGISPSQSPEGRGKKSPQNG 304
Query: 255 GDSSRSPYDPVKATSPENGEIKHSPDARGNPSDYNGYGGGSPDNMRXXXXXXXXXXXXRD 314
SSRSP+D K TSPENG SPD +GNPS YNGY GGSP+NM RD
Sbjct: 305 HGSSRSPHDTGK-TSPENGLGSGSPDEKGNPSPYNGY-GGSPNNM----------PDPRD 352
Query: 315 SPNYGGPESPMHERYRSQSPPAEE 338
SPNYGGPESPMHERYRSQSPPAEE
Sbjct: 353 SPNYGGPESPMHERYRSQSPPAEE 376
>Glyma10g38400.1
Length = 466
Score = 345 bits (884), Expect = 5e-95, Method: Compositional matrix adjust.
Identities = 200/313 (63%), Positives = 212/313 (67%), Gaps = 14/313 (4%)
Query: 19 FGRKGRRLRVEWTKHERGIXXXXXXXXXXXXXXXXXXLFVINFDTFHTRTRDLERHFEPY 78
FGRKGRRLRVEWTKHERG+ LFVINFDT+HTRTRDLERHFEPY
Sbjct: 134 FGRKGRRLRVEWTKHERGVRRPASSRRSSAIGRPSKTLFVINFDTYHTRTRDLERHFEPY 193
Query: 79 GKIASVRIRRNFAFVQYESEDDACKALEATNNSKLLDRVISVEFAAKDDDDRRNGYSPEX 138
GKI SVRIRRNFAFVQYESEDDA +ALEATN SKLLDRVISVEFA KDDDDRRNGYSPE
Sbjct: 194 GKIVSVRIRRNFAFVQYESEDDASRALEATNMSKLLDRVISVEFAVKDDDDRRNGYSPER 253
Query: 139 XXXXXXXXXXXXXXXXXXXXXERGSPDYGRGASPYKRERSSPDYXXXXXXXXXXXXXXXX 198
ERGSPDYGRG SPY+RER SPDY
Sbjct: 254 GRDRQRDRSRDGRRSPSPYRKERGSPDYGRGPSPYQRERGSPDYGRDRSRSRSPPRRERA 313
Query: 199 XXXHGRRSPSPYRRERDGSDLVRDSSRSPFHKERGRTDR--SSSLSPKRRGRTSPQNGGD 256
+GRRS SPYRRER+GS+ VRDSSRSP+HKERGRTD S S SP+ RGR SPQNG
Sbjct: 314 SPAYGRRSISPYRREREGSEPVRDSSRSPYHKERGRTDHGISPSQSPEGRGRKSPQNGHG 373
Query: 257 SSRSPYDPVKATSPENGEIKHSPDARGNPSDYNGYGGGSPDNMRXXXXXXXXXXXXRDSP 316
SSRSP D K TSPENG SPD +GNPS YNGY GGSP+ + RDSP
Sbjct: 374 SSRSPRDTGK-TSPENGHGSGSPDEKGNPSPYNGY-GGSPNTV----------PDPRDSP 421
Query: 317 NYGGPESPMHERY 329
NYGGPESPMHERY
Sbjct: 422 NYGGPESPMHERY 434
>Glyma03g01920.3
Length = 241
Score = 140 bits (354), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 87/169 (51%), Positives = 103/169 (60%), Gaps = 5/169 (2%)
Query: 19 FGRKGRRLRVEWTKHERGIXXXXXXXXXXXXXXX-XXXLFVINFDTFHTRTRDLERHFEP 77
FGRKGRR+RVEWTK ER LFVINFD + RTRDLERHF+
Sbjct: 49 FGRKGRRIRVEWTKQERDSRRSGGDSRKSSSNSRPSKTLFVINFDPVNARTRDLERHFDS 108
Query: 78 YGKIASVRIRRNFAFVQYESEDDACKALEATNNSKLLDRVISVEFAA--KDDDDRRNGYS 135
YGKI ++RIRRNFAF+Q+ES++DA +ALEATN SK +DRVI+VE+A DD DRRNGYS
Sbjct: 109 YGKILNIRIRRNFAFIQFESQEDATRALEATNLSKFMDRVITVEYAIRDDDDRDRRNGYS 168
Query: 136 PEXXXXXXXXXXXXXXXXXXXXXXERGSPDYGRGASPYKR--ERSSPDY 182
P+ RGSPDYG G++P R R SP Y
Sbjct: 169 PDRRGHDSPDGRYGRGRSPSPYRRGRGSPDYGHGSNPSSRPEPRGSPKY 217
>Glyma03g01920.2
Length = 241
Score = 140 bits (354), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 87/169 (51%), Positives = 103/169 (60%), Gaps = 5/169 (2%)
Query: 19 FGRKGRRLRVEWTKHERGIXXXXXXXXXXXXXXX-XXXLFVINFDTFHTRTRDLERHFEP 77
FGRKGRR+RVEWTK ER LFVINFD + RTRDLERHF+
Sbjct: 49 FGRKGRRIRVEWTKQERDSRRSGGDSRKSSSNSRPSKTLFVINFDPVNARTRDLERHFDS 108
Query: 78 YGKIASVRIRRNFAFVQYESEDDACKALEATNNSKLLDRVISVEFAA--KDDDDRRNGYS 135
YGKI ++RIRRNFAF+Q+ES++DA +ALEATN SK +DRVI+VE+A DD DRRNGYS
Sbjct: 109 YGKILNIRIRRNFAFIQFESQEDATRALEATNLSKFMDRVITVEYAIRDDDDRDRRNGYS 168
Query: 136 PEXXXXXXXXXXXXXXXXXXXXXXERGSPDYGRGASPYKR--ERSSPDY 182
P+ RGSPDYG G++P R R SP Y
Sbjct: 169 PDRRGHDSPDGRYGRGRSPSPYRRGRGSPDYGHGSNPSSRPEPRGSPKY 217
>Glyma03g01920.1
Length = 252
Score = 140 bits (354), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 87/169 (51%), Positives = 103/169 (60%), Gaps = 5/169 (2%)
Query: 19 FGRKGRRLRVEWTKHERGIXXXXXXXXXXXXXXX-XXXLFVINFDTFHTRTRDLERHFEP 77
FGRKGRR+RVEWTK ER LFVINFD + RTRDLERHF+
Sbjct: 60 FGRKGRRIRVEWTKQERDSRRSGGDSRKSSSNSRPSKTLFVINFDPVNARTRDLERHFDS 119
Query: 78 YGKIASVRIRRNFAFVQYESEDDACKALEATNNSKLLDRVISVEFAA--KDDDDRRNGYS 135
YGKI ++RIRRNFAF+Q+ES++DA +ALEATN SK +DRVI+VE+A DD DRRNGYS
Sbjct: 120 YGKILNIRIRRNFAFIQFESQEDATRALEATNLSKFMDRVITVEYAIRDDDDRDRRNGYS 179
Query: 136 PEXXXXXXXXXXXXXXXXXXXXXXERGSPDYGRGASPYKR--ERSSPDY 182
P+ RGSPDYG G++P R R SP Y
Sbjct: 180 PDRRGHDSPDGRYGRGRSPSPYRRGRGSPDYGHGSNPSSRPEPRGSPKY 228
>Glyma07g05900.2
Length = 233
Score = 129 bits (323), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 63/116 (54%), Positives = 78/116 (67%), Gaps = 4/116 (3%)
Query: 19 FGRKGRRLRVEWTKHERGIXXXXXXXXXXXXXXXXXXLFVINFDTFHTRTRDLERHFEPY 78
FG + RRL VEW + ERG LFVINFD TR RD+E+HFEPY
Sbjct: 34 FGHEKRRLSVEWARGERG----RHHDGSKANQKPTKTLFVINFDPIRTRVRDIEKHFEPY 89
Query: 79 GKIASVRIRRNFAFVQYESEDDACKALEATNNSKLLDRVISVEFAAKDDDDRRNGY 134
G + VRIRRNFAFVQ+E+++DA KALE TN SK+LDRV+SVE+A +DD +R + Y
Sbjct: 90 GNVLHVRIRRNFAFVQFETQEDATKALECTNMSKILDRVVSVEYALRDDGERGDNY 145
>Glyma07g05900.1
Length = 259
Score = 129 bits (323), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 63/116 (54%), Positives = 78/116 (67%), Gaps = 4/116 (3%)
Query: 19 FGRKGRRLRVEWTKHERGIXXXXXXXXXXXXXXXXXXLFVINFDTFHTRTRDLERHFEPY 78
FG + RRL VEW + ERG LFVINFD TR RD+E+HFEPY
Sbjct: 60 FGHEKRRLSVEWARGERG----RHHDGSKANQKPTKTLFVINFDPIRTRVRDIEKHFEPY 115
Query: 79 GKIASVRIRRNFAFVQYESEDDACKALEATNNSKLLDRVISVEFAAKDDDDRRNGY 134
G + VRIRRNFAFVQ+E+++DA KALE TN SK+LDRV+SVE+A +DD +R + Y
Sbjct: 116 GNVLHVRIRRNFAFVQFETQEDATKALECTNMSKILDRVVSVEYALRDDGERGDNY 171
>Glyma16g02500.1
Length = 264
Score = 127 bits (320), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 62/116 (53%), Positives = 78/116 (67%), Gaps = 4/116 (3%)
Query: 19 FGRKGRRLRVEWTKHERGIXXXXXXXXXXXXXXXXXXLFVINFDTFHTRTRDLERHFEPY 78
FG + RRL VEW + ERG LFVINFD TR RD+E+HFEPY
Sbjct: 60 FGHEKRRLSVEWARGERG----RHRDGSKANQKPTKTLFVINFDPIRTRVRDIEKHFEPY 115
Query: 79 GKIASVRIRRNFAFVQYESEDDACKALEATNNSKLLDRVISVEFAAKDDDDRRNGY 134
G + VRIRRNFAFVQ+E+++DA KA+E TN SK+LDRV+SVE+A +DD +R + Y
Sbjct: 116 GNVLHVRIRRNFAFVQFETQEDATKAIECTNMSKILDRVVSVEYALRDDGERGDNY 171
>Glyma03g42020.1
Length = 75
Score = 89.0 bits (219), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 37/60 (61%), Positives = 50/60 (83%)
Query: 56 LFVINFDTFHTRTRDLERHFEPYGKIASVRIRRNFAFVQYESEDDACKALEATNNSKLLD 115
LFVINFD TR RD+ERHFEPYGK+ ++RIRRNF+FVQ+E+++DA KALE T+ +++
Sbjct: 14 LFVINFDPIRTRVRDIERHFEPYGKVLNIRIRRNFSFVQFETQEDAIKALECTHMRSVMN 73