Miyakogusa Predicted Gene
- Lj5g3v2013930.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj5g3v2013930.1 Non Chatacterized Hit- tr|K4AUE7|K4AUE7_SOLLC
Uncharacterized protein OS=Solanum lycopersicum
GN=Sol,40.8,4e-17,PROTEIN F12F6.8, PARTIALLY CONFIRMED BY TRANSCRIPT
EVIDENCE,NULL; F-BOX/LEUCINE RICH REPEAT PROTEIN,,CUFF.56495.1
(166 letters)
Database: Glyma1.pep
75,778 sequences; 25,431,882 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Glyma20g29670.1 307 4e-84
Glyma10g38140.1 306 4e-84
Glyma02g06390.1 78 5e-15
Glyma01g24580.1 61 5e-10
Glyma16g25470.1 58 4e-09
Glyma15g22310.1 57 1e-08
>Glyma20g29670.1
Length = 305
Score = 307 bits (786), Expect = 4e-84, Method: Compositional matrix adjust.
Identities = 144/166 (86%), Positives = 159/166 (95%)
Query: 1 MCKAIRGWKELESMTMPTIANPPYLLDEISTHCKNFSELKIMGPCDIVFASSLAAFLPKL 60
MCKAIRGWKELES+TMP+IANPPY+L+EISTHCKNFSELKIMGPCDI FASSLAAFLPKL
Sbjct: 140 MCKAIRGWKELESLTMPSIANPPYILEEISTHCKNFSELKIMGPCDIFFASSLAAFLPKL 199
Query: 61 KVLSLRCSILFKDVLILILDSLQHLEVLNISHCVLVEPLPPPQHKGIIREIDQTIRQKAS 120
++LSLRCS+L+KDVLILILD+LQHLEVLNISHCVL+E LP PQ K II+EID TIRQKAS
Sbjct: 200 RILSLRCSMLYKDVLILILDNLQHLEVLNISHCVLMEALPAPQQKRIIKEIDVTIRQKAS 259
Query: 121 RLRSFITCMDDSCVMCQRTRTDEGLVRWYKYEEGLWKTDEVRSLAL 166
RLR F+TCM+DSCVMCQRTRTDEGL+RWYKYEEGLWKTDEVRSL+L
Sbjct: 260 RLREFLTCMEDSCVMCQRTRTDEGLIRWYKYEEGLWKTDEVRSLSL 305
>Glyma10g38140.1
Length = 304
Score = 306 bits (785), Expect = 4e-84, Method: Compositional matrix adjust.
Identities = 146/166 (87%), Positives = 158/166 (95%)
Query: 1 MCKAIRGWKELESMTMPTIANPPYLLDEISTHCKNFSELKIMGPCDIVFASSLAAFLPKL 60
MCKAIRGWKELES+TMP IANPPY+L+EISTHCKNFSELKIMGPCDI FASSLAAFLPKL
Sbjct: 139 MCKAIRGWKELESLTMPCIANPPYILEEISTHCKNFSELKIMGPCDIFFASSLAAFLPKL 198
Query: 61 KVLSLRCSILFKDVLILILDSLQHLEVLNISHCVLVEPLPPPQHKGIIREIDQTIRQKAS 120
+VLSLRCS+L+KDVLILILDSLQHLEVLNISHCVL+E LP PQ K II+EID TIRQKAS
Sbjct: 199 RVLSLRCSMLYKDVLILILDSLQHLEVLNISHCVLMEALPAPQQKRIIKEIDVTIRQKAS 258
Query: 121 RLRSFITCMDDSCVMCQRTRTDEGLVRWYKYEEGLWKTDEVRSLAL 166
RLR F+TCM+DSCVMCQRTRTDEGL+RWYKYEEGLWKTDEVRSL+L
Sbjct: 259 RLREFLTCMEDSCVMCQRTRTDEGLIRWYKYEEGLWKTDEVRSLSL 304
>Glyma02g06390.1
Length = 314
Score = 77.8 bits (190), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 54/174 (31%), Positives = 84/174 (48%), Gaps = 17/174 (9%)
Query: 4 AIRGWKELESMTMPTIANPPYLLDEISTHCKNFSELKIMGPCDIVFASSLAAFL---PKL 60
A++ W LES+T+ Y+ I+ +CKN +E+K C + + + A L P L
Sbjct: 145 AMKSWGGLESITISFDDPNKYIFSAIAEYCKNITEMKFSHGCLLFEENYVEALLKCAPNL 204
Query: 61 KVLSLRCSILFKDVLILILDSLQHLEVLNISHCVLVEPLPPPQHKGIIREIDQTIRQKA- 119
K LS+RC + L + S QHLE +NI H +++ P G+ +D T QK
Sbjct: 205 KALSIRCIMTSMGALCGVFTSFQHLEAVNICHSSIID--APYSDFGV---VDITYVQKHL 259
Query: 120 --SRLRSFITCMDDSCVMCQRTRT--DEGLVRWYKY----EEGLWKTDEVRSLA 165
S I C + SC+ C+ R+ G+ + + E LW+ DE+ SLA
Sbjct: 260 PPSNYGKLIYCKEGSCLRCKNDRSIIPAGIFQITSFLIHASEDLWREDEITSLA 313
>Glyma01g24580.1
Length = 253
Score = 61.2 bits (147), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 47/171 (27%), Positives = 73/171 (42%), Gaps = 36/171 (21%)
Query: 4 AIRGWKELESMTMPTIANPPYLLDEISTHCKNFSELKIMGPCDIVFASSLAAFL---PKL 60
A++ W LES+T+ Y+ I+ +CKN +E+K C + + + A L P L
Sbjct: 109 AMKSWGGLESITISFDDPNKYIFSAIAKYCKNITEMKFSHGCLLFEENYVKALLKCAPNL 168
Query: 61 KVLSLRCSILFKDVLILILDSLQHLEVLNISHCVLVEPLPPPQHKGIIREIDQTIRQKAS 120
K LS+RC + L + S QHLE +NI H +++ P G
Sbjct: 169 KALSIRCIMTSMGALCGVFTSFQHLEAVNICHSSIID--APYSDFG-------------- 212
Query: 121 RLRSFITCMDDSCVMCQRTRT--DEGLVR----WYKYEEGLWKTDEVRSLA 165
SC+ C+ R+ G+ + E LW+ DE+ SLA
Sbjct: 213 -----------SCLRCKNDRSIIPAGIFQITSILIHASEDLWREDEITSLA 252
>Glyma16g25470.1
Length = 275
Score = 58.2 bits (139), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 46/173 (26%), Positives = 79/173 (45%), Gaps = 16/173 (9%)
Query: 4 AIRGWKELESMTMPTIANPPYLLDEISTHCKNFSELKIMGPC--DIVFASSLAAFLPKLK 61
A++ W+ LES+ + + Y+ I +CKN E+K C + +L P L+
Sbjct: 107 AMKSWEGLESINITSNIPSHYIFPAIGKYCKNIIEMKFGYGCLFEEKHVEALIKCAPNLE 166
Query: 62 VLSLRCSILFKDVLILILDSLQHLEVLNISHCVLVEPLPPPQHKGIIREIDQTIRQK--- 118
LS+R + + L + L+HLE +NI H +++ ++G + ++D Q
Sbjct: 167 GLSIRSKMTKMEALCGVFTFLEHLEAVNILHSFIID----ASYRG-LGDVDICYLQNHLP 221
Query: 119 ASRLRSFITCMDDSCVMCQRTRT-DEGLVRW-----YKYEEGLWKTDEVRSLA 165
S L I C SC+ C+ + G + + E LW+ DE+ SLA
Sbjct: 222 PSSLGKLIYCEGGSCLRCKNGNSITTGRIFQIASIIMRASEDLWREDEITSLA 274
>Glyma15g22310.1
Length = 269
Score = 56.6 bits (135), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 42/162 (25%), Positives = 72/162 (44%), Gaps = 27/162 (16%)
Query: 4 AIRGWKELESMTMPTIANPPYLLDEISTHCKNFSELKIMGPCDIVFASSLAAFLPKLKVL 63
A++ W LES+ + + Y+ I +CK+ + +K + A +L P LKV
Sbjct: 134 AMKSWGGLESINISSGVPTDYIFPAIHEYCKSVNGIKFHCEFEEKHAEALIESTPNLKVF 193
Query: 64 SLRCSILFKDVLILILDSLQHLEVLNISHCVLVEPLPPPQHKGIIREIDQTIRQKASRLR 123
S+R +++ L +L S++HLE +NI H +V+ + + KG
Sbjct: 194 SIRSTVVSMKALRSVLTSVEHLEAVNIYHSFIVD-MSHDEFKG----------------- 235
Query: 124 SFITCMDDSCVMCQRTRTDEGLVRWYKYEEGLWKTDEVRSLA 165
SC+ CQ R+ L + +W+ DE+ SLA
Sbjct: 236 --------SCLKCQYERSI-ALGSFLYRALDIWREDEITSLA 268