Miyakogusa Predicted Gene

Lj5g3v1999150.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj5g3v1999150.1 Non Chatacterized Hit- tr|I1H1L1|I1H1L1_BRADI
Uncharacterized protein OS=Brachypodium distachyon
GN=,43.87,9e-19,seg,NULL; coiled-coil,NULL,CUFF.56328.1
         (252 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma10g37810.1                                                       154   9e-38
Glyma20g30020.1                                                       141   8e-34

>Glyma10g37810.1 
          Length = 424

 Score =  154 bits (389), Expect = 9e-38,   Method: Compositional matrix adjust.
 Identities = 105/239 (43%), Positives = 125/239 (52%), Gaps = 23/239 (9%)

Query: 7   ADHVLNLDKVPYYQST-SEGKEDGSVGKEVEDLKQRVER--NESVSKALESLISMKDCLS 63
           +DH+L+ D VPY +    E ++D    KE  +  +      N  + KA ESL S K+ LS
Sbjct: 15  SDHLLHSDTVPYIEVVLRENQQDDEYFKERVERLESEREERNGVMFKASESLTSTKESLS 74

Query: 64  RVIEGLEGEKDENYVTLEGDGXXXXXXXXXXXXXXXXXXTSRLAVEVETRVSKYXXXXXX 123
            VIEGLEGEKD  +V    +G                   SRLA+EVETRV +Y      
Sbjct: 75  SVIEGLEGEKDATFVE---NGNGEWSDVESRMLLEDARLISRLAIEVETRVDRYKEMRRK 131

Query: 124 XXXXXXXXXXXXXXXNRDINNLLRVSLLEKEALEKRIKGHDHKRMPLLQFAEFGLQKVXX 183
                          NRD+NNLLR++LLEKEALEKRIKGHDHKRMPLLQ   FGLQKV  
Sbjct: 132 EKRELESSLISLTEENRDVNNLLRIALLEKEALEKRIKGHDHKRMPLLQ---FGLQKVGF 188

Query: 184 XXXXXXXXXEQPTEGXXXXXXXXXXXXXXXXXXXXTVERIMKNLRLEITQLRRALEESR 242
                    EQ TE                     ++ERIMKNLRLE TQLRR+LEESR
Sbjct: 189 GFMMGGGNNEQSTEN--------------SFAKSDSMERIMKNLRLETTQLRRSLEESR 233


>Glyma20g30020.1 
          Length = 442

 Score =  141 bits (355), Expect = 8e-34,   Method: Compositional matrix adjust.
 Identities = 93/201 (46%), Positives = 106/201 (52%), Gaps = 12/201 (5%)

Query: 45  NESVSKALESLISMKDCLSRVIEGLEGEKDENYV---TLEGDGXXXXXXXXXXXXXXXXX 101
           N  + KALESL S K+ LS VIEGLEGEKDE +V   T E  G                 
Sbjct: 62  NGVMFKALESLTSTKESLSSVIEGLEGEKDETFVENVTGEWSGVESRMLLEEARL----- 116

Query: 102 XTSRLAVEVETRVSKYXXXXXXXXXXXXXXXXXXXXXNRDINNLLRVSLLEKEALEKRIK 161
             SRLA+EVET+V +Y                     NRD++NLLR++L EKEALEKRIK
Sbjct: 117 -ISRLAIEVETKVDRYKEMRRKEKRELESSLISLTEENRDVHNLLRIALSEKEALEKRIK 175

Query: 162 GHDHKRMPLLQFAEFGLQKVXXXXXXXXXXXEQPTEGXXXXXXXXXXXXXXXXXXXXTVE 221
           GHDHKRMPLLQ   FGLQKV            + +                      TVE
Sbjct: 176 GHDHKRMPLLQ---FGLQKVGFGFMMMGGGNNEQSTEHSGVKSDSSECEEEVISLASTVE 232

Query: 222 RIMKNLRLEITQLRRALEESR 242
           RIMKNLRLE TQLRR+LEESR
Sbjct: 233 RIMKNLRLETTQLRRSLEESR 253